RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 CRIP2P52943 208 aaPredicted RBP9.93□□□□□ -0.82
SHCBP1-204ENST00000565887 TAS2R31P59538 309 aa9.93□□□□□ -0.82
SHCBP1-204ENST00000565887 RND3P61587 244 aa9.93□□□□□ -0.82
SHCBP1-204ENST00000565887 CD83Q01151 205 aa9.93□□□□□ -0.82
SHCBP1-204ENST00000565887 AKIRIN2Q53H80 203 aa9.93□□□□□ -0.82
SHCBP1-204ENST00000565887 NDUFA11Q86Y39 141 aa9.93□□□□□ -0.82
SHCBP1-204ENST00000565887 MMD2Q8IY49 270 aa9.93□□□□□ -0.82
SHCBP1-204ENST00000565887 TOMM5Q8N4H5 51 aa9.93□□□□□ -0.82
SHCBP1-204ENST00000565887 OR4A5Q8NH83 315 aa9.93□□□□□ -0.82
SHCBP1-204ENST00000565887 SLC2A8Q9NY64 477 aa9.93□□□□□ -0.82
SHCBP1-204ENST00000565887 V9GYH0 126 aa9.93□□□□□ -0.82
SHCBP1-204ENST00000565887 LINC01548A6NM66 108 aa9.92□□□□□ -0.82
SHCBP1-204ENST00000565887 SRRM4A7MD48 611 aaKnown RBP9.92□□□□□ -0.82
SHCBP1-204ENST00000565887 TNFSF12O43508 249 aa9.92□□□□□ -0.82
SHCBP1-204ENST00000565887 OR2A4O95047 310 aa9.92□□□□□ -0.82
SHCBP1-204ENST00000565887 ELANEP08246 267 aa9.92□□□□□ -0.82
SHCBP1-204ENST00000565887 NQO2P16083 231 aa9.92□□□□□ -0.82
SHCBP1-204ENST00000565887 MAS1LP35410 378 aa9.92□□□□□ -0.82
SHCBP1-204ENST00000565887 INPP1P49441 399 aa9.92□□□□□ -0.82
SHCBP1-204ENST00000565887 KRTAP10-3P60369 221 aa9.92□□□□□ -0.82
SHCBP1-204ENST00000565887 FOXE3Q13461 319 aa9.92□□□□□ -0.82
SHCBP1-204ENST00000565887 FXYD3Q14802 87 aa9.92□□□□□ -0.82
SHCBP1-204ENST00000565887 C2orf68Q2NKX9 166 aa9.92□□□□□ -0.82
SHCBP1-204ENST00000565887 TMEM95Q3KNT9 176 aa9.92□□□□□ -0.82
SHCBP1-204ENST00000565887 SCGB2B2Q4G0G5 96 aa9.92□□□□□ -0.82
SHCBP1-204ENST00000565887 CCDC71LQ8N9Z2 235 aa9.92□□□□□ -0.82
SHCBP1-204ENST00000565887 OR51H1Q8NH63 302 aa9.92□□□□□ -0.82
SHCBP1-204ENST00000565887 RHOVQ96L33 236 aa9.92□□□□□ -0.82
SHCBP1-204ENST00000565887 NOL4LQ96MY1 436 aaPredicted RBP9.92□□□□□ -0.82
SHCBP1-204ENST00000565887 OR2A7Q96R45 310 aa9.92□□□□□ -0.82
SHCBP1-204ENST00000565887 HSPB9Q9BQS6 159 aa9.92□□□□□ -0.82
SHCBP1-204ENST00000565887 COMMD9Q9P000 198 aa9.92□□□□□ -0.82
SHCBP1-204ENST00000565887 C14orf166Q9Y224 244 aaKnown RBP9.92□□□□□ -0.82
SHCBP1-204ENST00000565887 TSSC4Q9Y5U2 329 aaPredicted RBP9.92□□□□□ -0.82
SHCBP1-204ENST00000565887 NUBP2Q9Y5Y2 271 aa9.92□□□□□ -0.82
SHCBP1-204ENST00000565887 TRAV41A0A0B4J266 112 aa9.91□□□□□ -0.82
SHCBP1-204ENST00000565887 TCRBV4S1A1TA0A5B7 111 aa9.91□□□□□ -0.82
SHCBP1-204ENST00000565887 FCN1O00602 326 aa9.91□□□□□ -0.82
SHCBP1-204ENST00000565887 MPPED1O15442 326 aa9.91□□□□□ -0.82
SHCBP1-204ENST00000565887 ATG12O94817 140 aa9.91□□□□□ -0.82
SHCBP1-204ENST00000565887 IGHG4P01861 327 aa9.91□□□□□ -0.82
SHCBP1-204ENST00000565887 ZNF735P0CB33 412 aa9.91□□□□□ -0.82
SHCBP1-204ENST00000565887 RPA2P15927 270 aa9.91□□□□□ -0.82
SHCBP1-204ENST00000565887 BRWD1-AS2P59051 145 aa9.91□□□□□ -0.82
SHCBP1-204ENST00000565887 ERVK-16P61578 105 aa9.91□□□□□ -0.82
SHCBP1-204ENST00000565887 ZNF79Q15937 498 aa9.91□□□□□ -0.82
SHCBP1-204ENST00000565887 POU2AF1Q16633 256 aa9.91□□□□□ -0.82
SHCBP1-204ENST00000565887 PRSS8Q16651 343 aa9.91□□□□□ -0.82
SHCBP1-204ENST00000565887 PHLDA2Q53GA4 152 aa9.91□□□□□ -0.82
SHCBP1-204ENST00000565887 OR2B11Q5JQS5 317 aa9.91□□□□□ -0.82
SHCBP1-204ENST00000565887 CXorf66Q5JRM2 361 aaPredicted RBP9.91□□□□□ -0.82
SHCBP1-204ENST00000565887 TMEM65Q6PI78 240 aa9.91□□□□□ -0.82
SHCBP1-204ENST00000565887 OR4D10Q8NGI6 311 aa9.91□□□□□ -0.82
SHCBP1-204ENST00000565887 OR4C16Q8NGL9 310 aa9.91□□□□□ -0.82
SHCBP1-204ENST00000565887 ABHD5Q8WTS1 349 aa9.91□□□□□ -0.82
SHCBP1-204ENST00000565887 S100ZQ8WXG8 99 aa9.91□□□□□ -0.82
SHCBP1-204ENST00000565887 CLCC1Q96S66 551 aa9.91□□□□□ -0.82
SHCBP1-204ENST00000565887 SRRQ9GZT4 340 aa9.91□□□□□ -0.82
SHCBP1-204ENST00000565887 FXYD6Q9H0Q3 95 aa9.91□□□□□ -0.82
SHCBP1-204ENST00000565887 PARP11Q9NR21 331 aa9.91□□□□□ -0.82
SHCBP1-204ENST00000565887 SLC2A9Q9NRM0 540 aa9.91□□□□□ -0.82
SHCBP1-204ENST00000565887 BET1LQ9NYM9 111 aa9.91□□□□□ -0.82
SHCBP1-204ENST00000565887 COPZ2Q9P299 210 aa9.91□□□□□ -0.82
SHCBP1-204ENST00000565887 PIGBOS1A0A0B4J2F0 54 aa9.9□□□□□ -0.82
SHCBP1-204ENST00000565887 NAP1L6A6NFF2 107 aa9.9□□□□□ -0.82
SHCBP1-204ENST00000565887 ATP6V0E1O15342 81 aa9.9□□□□□ -0.82
SHCBP1-204ENST00000565887 CA2P00918 260 aa9.9□□□□□ -0.82
SHCBP1-204ENST00000565887 RLN1P04808 185 aa9.9□□□□□ -0.82
SHCBP1-204ENST00000565887 SERPINE2P07093 398 aa9.9□□□□□ -0.82
SHCBP1-204ENST00000565887 CTSDP07339 412 aaPredicted RBP9.9□□□□□ -0.82
SHCBP1-204ENST00000565887 SAA1P0DJI8 122 aaPredicted RBP9.9□□□□□ -0.82
SHCBP1-204ENST00000565887 CD28P10747 220 aa9.9□□□□□ -0.82
SHCBP1-204ENST00000565887 PIGPP57054 158 aa9.9□□□□□ -0.82
SHCBP1-204ENST00000565887 SRSF4Q08170 494 aaKnown RBP9.9□□□□□ -0.82
SHCBP1-204ENST00000565887 PRR31Q5SQ13 230 aa9.9□□□□□ -0.82
SHCBP1-204ENST00000565887 IDO2Q6ZQW0 420 aa9.9□□□□□ -0.82
SHCBP1-204ENST00000565887 ZNF329Q86UD4 541 aa9.9□□□□□ -0.82
SHCBP1-204ENST00000565887 TBC1D26Q86UD7 250 aa9.9□□□□□ -0.82
SHCBP1-204ENST00000565887 PUSL1Q8N0Z8 303 aaKnown RBP9.9□□□□□ -0.82
SHCBP1-204ENST00000565887 RNF152Q8N8N0 203 aa9.9□□□□□ -0.82
SHCBP1-204ENST00000565887 MINDY2Q8NBR6 621 aa9.9□□□□□ -0.82
SHCBP1-204ENST00000565887 OR4F17Q8NGA8 305 aa9.9□□□□□ -0.82
SHCBP1-204ENST00000565887 OR5M8Q8NGP6 311 aa9.9□□□□□ -0.82
SHCBP1-204ENST00000565887 TMEM167AQ8TBQ9 72 aa9.9□□□□□ -0.82
SHCBP1-204ENST00000565887 ARPC1AQ92747 370 aa9.9□□□□□ -0.82
SHCBP1-204ENST00000565887 OR4F4Q96R69 305 aa9.9□□□□□ -0.82
SHCBP1-204ENST00000565887 SLC25A21Q9BQT8 299 aaPredicted RBP9.9□□□□□ -0.82
SHCBP1-204ENST00000565887 MCUBQ9NWR8 336 aa9.9□□□□□ -0.82
SHCBP1-204ENST00000565887 CENPXA8MT69 81 aa9.89□□□□□ -0.83
SHCBP1-204ENST00000565887 RAMP3O60896 148 aa9.89□□□□□ -0.83
SHCBP1-204ENST00000565887 KBTBD11O94819 623 aa9.89□□□□□ -0.83
SHCBP1-204ENST00000565887 PPIFP30405 207 aaKnown RBP9.89□□□□□ -0.83
SHCBP1-204ENST00000565887 LPAR6P43657 344 aa9.89□□□□□ -0.83
SHCBP1-204ENST00000565887 CFHR3Q02985 330 aa9.89□□□□□ -0.83
SHCBP1-204ENST00000565887 KLF9Q13886 244 aaPredicted RBP9.89□□□□□ -0.83
SHCBP1-204ENST00000565887 CNPY1Q3B7I2 92 aa9.89□□□□□ -0.83
SHCBP1-204ENST00000565887 TRIQKQ629K1 86 aa9.89□□□□□ -0.83
SHCBP1-204ENST00000565887 ZNF57Q68EA5 555 aaPredicted RBP9.89□□□□□ -0.83
SHCBP1-204ENST00000565887 SLC25A42Q86VD7 318 aa9.89□□□□□ -0.83
SHCBP1-204ENST00000565887 DMBX1Q8NFW5 382 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms