RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 AKR1C2P52895 323 aa6.24□□□□□ -1.41
CDH1-208ENST00000565810 SUPT4H1P63272 117 aaKnown RBP6.24□□□□□ -1.41
CDH1-208ENST00000565810 TMEM187Q14656 261 aa6.24□□□□□ -1.41
CDH1-208ENST00000565810 MMDQ15546 238 aa6.24□□□□□ -1.41
CDH1-208ENST00000565810 ZNF585BQ52M93 769 aa6.24□□□□□ -1.41
CDH1-208ENST00000565810 UXS1Q8NBZ7 420 aa6.24□□□□□ -1.41
CDH1-208ENST00000565810 PIFOQ8TCI5 191 aa6.24□□□□□ -1.41
CDH1-208ENST00000565810 ZNF431Q8TF32 576 aaPredicted RBP6.24□□□□□ -1.41
CDH1-208ENST00000565810 GLYATL2Q8WU03 294 aa6.24□□□□□ -1.41
CDH1-208ENST00000565810 RBPMSQ93062 196 aaKnown RBP6.24□□□□□ -1.41
CDH1-208ENST00000565810 IL22RA2Q969J5 263 aa6.24□□□□□ -1.41
CDH1-208ENST00000565810 R3HDM4Q96D70 268 aa6.24□□□□□ -1.41
CDH1-208ENST00000565810 TMEM56Q96MV1 263 aa6.24□□□□□ -1.41
CDH1-208ENST00000565810 RBM14Q96PK6 669 aaKnown RBP6.24□□□□□ -1.41
CDH1-208ENST00000565810 RASL11BQ9BPW5 248 aa6.24□□□□□ -1.41
CDH1-208ENST00000565810 SLC25A33Q9BSK2 321 aa6.24□□□□□ -1.41
CDH1-208ENST00000565810 VPREB3Q9UKI3 123 aa6.24□□□□□ -1.41
CDH1-208ENST00000565810 MOB4Q9Y3A3 225 aa6.24□□□□□ -1.41
CDH1-208ENST00000565810 TMEM56-RWDD3S4R434 201 aa6.24□□□□□ -1.41
CDH1-208ENST00000565810 HIVEP1P15822 2718 aa6.23□□□□□ -1.41
CDH1-208ENST00000565810 A0A0A6YYJ9 748 aa6.23□□□□□ -1.41
CDH1-208ENST00000565810 A0A0B4J2A0 478 aa6.23□□□□□ -1.41
CDH1-208ENST00000565810 DUXBA0A1W2PPF3 345 aa6.23□□□□□ -1.41
CDH1-208ENST00000565810 CLDN34H7C241 214 aa6.23□□□□□ -1.41
CDH1-208ENST00000565810 FGF16O43320 207 aa6.23□□□□□ -1.41
CDH1-208ENST00000565810 TCF21O43680 179 aa6.23□□□□□ -1.41
CDH1-208ENST00000565810 SSNA1O43805 119 aa6.23□□□□□ -1.41
CDH1-208ENST00000565810 SNAPC5O75971 98 aa6.23□□□□□ -1.41
CDH1-208ENST00000565810 ACTL6BO94805 426 aa6.23□□□□□ -1.41
CDH1-208ENST00000565810 OR2A4O95047 310 aa6.23□□□□□ -1.41
CDH1-208ENST00000565810 S1PR2O95136 353 aa6.23□□□□□ -1.41
CDH1-208ENST00000565810 IFNA21P01568 189 aa6.23□□□□□ -1.41
CDH1-208ENST00000565810 F2RL1P55085 397 aa6.23□□□□□ -1.41
CDH1-208ENST00000565810 BRWD1-AS2P59051 145 aa6.23□□□□□ -1.41
CDH1-208ENST00000565810 UBE2KP61086 200 aa6.23□□□□□ -1.41
CDH1-208ENST00000565810 PSG5Q15238 335 aa6.23□□□□□ -1.41
CDH1-208ENST00000565810 TATDN3Q17R31 274 aa6.23□□□□□ -1.41
CDH1-208ENST00000565810 TUSC1Q2TAM9 212 aa6.23□□□□□ -1.41
CDH1-208ENST00000565810 TMEM268Q5VZI3 342 aa6.23□□□□□ -1.41
CDH1-208ENST00000565810 SSX9Q7RTT3 188 aa6.23□□□□□ -1.41
CDH1-208ENST00000565810 H2BFWTQ7Z2G1 175 aa6.23□□□□□ -1.41
CDH1-208ENST00000565810 TMEM219Q86XT9 240 aa6.23□□□□□ -1.41
CDH1-208ENST00000565810 SELENOHQ8IZQ5 122 aaKnown RBP6.23□□□□□ -1.41
CDH1-208ENST00000565810 C12orf45Q8N5I9 185 aaPredicted RBP6.23□□□□□ -1.41
CDH1-208ENST00000565810 Q8N6K4 173 aa6.23□□□□□ -1.41
CDH1-208ENST00000565810 TEX45Q8NA69 505 aa6.23□□□□□ -1.41
CDH1-208ENST00000565810 NPBQ8NG41 125 aa6.23□□□□□ -1.41
CDH1-208ENST00000565810 OR52B4Q8NGK2 314 aa6.23□□□□□ -1.41
CDH1-208ENST00000565810 MITD1Q8WV92 249 aa6.23□□□□□ -1.41
CDH1-208ENST00000565810 RITA1Q96K30 269 aa6.23□□□□□ -1.41
CDH1-208ENST00000565810 RHOVQ96L33 236 aa6.23□□□□□ -1.41
CDH1-208ENST00000565810 OR2A7Q96R45 310 aa6.23□□□□□ -1.41
CDH1-208ENST00000565810 SEC22CQ9BRL7 303 aa6.23□□□□□ -1.41
CDH1-208ENST00000565810 METTL1Q9UBP6 276 aaKnown RBP6.23□□□□□ -1.41
CDH1-208ENST00000565810 SHPKQ9UHJ6 478 aa6.23□□□□□ -1.41
CDH1-208ENST00000565810 TMED3Q9Y3Q3 217 aa6.23□□□□□ -1.41
CDH1-208ENST00000565810 MARCH11A6NNE9 402 aa6.22□□□□□ -1.41
CDH1-208ENST00000565810 SRRM4A7MD48 611 aaKnown RBP6.22□□□□□ -1.41
CDH1-208ENST00000565810 RRHO14718 337 aa6.22□□□□□ -1.41
CDH1-208ENST00000565810 SLC25A17O43808 307 aa6.22□□□□□ -1.41
CDH1-208ENST00000565810 RBMXL2O75526 392 aaKnown RBP6.22□□□□□ -1.41
CDH1-208ENST00000565810 CRYBA1P05813 215 aa6.22□□□□□ -1.41
CDH1-208ENST00000565810 HOXB5P09067 269 aa6.22□□□□□ -1.41
CDH1-208ENST00000565810 VDAC1P21796 283 aa6.22□□□□□ -1.41
CDH1-208ENST00000565810 G6PCP35575 357 aa6.22□□□□□ -1.41
CDH1-208ENST00000565810 HILS1P60008 231 aa6.22□□□□□ -1.41
CDH1-208ENST00000565810 POU2AF1Q16633 256 aa6.22□□□□□ -1.41
CDH1-208ENST00000565810 ANKRD55Q3KP44 614 aa6.22□□□□□ -1.41
CDH1-208ENST00000565810 THOC7Q6I9Y2 204 aaKnown RBP6.22□□□□□ -1.41
CDH1-208ENST00000565810 LIN54Q6MZP7 749 aa6.22□□□□□ -1.41
CDH1-208ENST00000565810 FAM219AQ8IW50 185 aa6.22□□□□□ -1.41
CDH1-208ENST00000565810 VKORC1L1Q8N0U8 176 aa6.22□□□□□ -1.41
CDH1-208ENST00000565810 CADM3Q8N126 398 aa6.22□□□□□ -1.41
CDH1-208ENST00000565810 LRTM2Q8N967 370 aa6.22□□□□□ -1.41
CDH1-208ENST00000565810 OR4A16Q8NH70 328 aa6.22□□□□□ -1.41
CDH1-208ENST00000565810 OR4A5Q8NH83 315 aa6.22□□□□□ -1.41
CDH1-208ENST00000565810 LSM10Q969L4 123 aaKnown RBP6.22□□□□□ -1.41
CDH1-208ENST00000565810 DUX5Q96PT3 197 aa6.22□□□□□ -1.41
CDH1-208ENST00000565810 SPIN2AQ99865 258 aa6.22□□□□□ -1.41
CDH1-208ENST00000565810 SPIN2BQ9BPZ2 258 aa6.22□□□□□ -1.41
CDH1-208ENST00000565810 TMEM140Q9NV12 185 aa6.22□□□□□ -1.41
CDH1-208ENST00000565810 BET1LQ9NYM9 111 aa6.22□□□□□ -1.41
CDH1-208ENST00000565810 MMP24Q9Y5R2 645 aa6.22□□□□□ -1.41
CDH1-208ENST00000565810 F8P00451 2351 aa6.22□□□□□ -1.41
CDH1-208ENST00000565810 NAV3Q8IVL0 2385 aa6.22□□□□□ -1.41
CDH1-208ENST00000565810 TLN2Q9Y4G6 2542 aa6.21□□□□□ -1.42
CDH1-208ENST00000565810 DNAJC9-AS1A6NH13 148 aa6.21□□□□□ -1.42
CDH1-208ENST00000565810 TRIM77I1YAP6 450 aa6.21□□□□□ -1.42
CDH1-208ENST00000565810 NDUFA3O95167 84 aa6.21□□□□□ -1.42
CDH1-208ENST00000565810 CNIH1O95406 144 aa6.21□□□□□ -1.42
CDH1-208ENST00000565810 IGKV1-39P01597 117 aa6.21□□□□□ -1.42
CDH1-208ENST00000565810 IGLV2-23P01705 113 aa6.21□□□□□ -1.42
CDH1-208ENST00000565810 IGKV1D-39P04432 117 aa6.21□□□□□ -1.42
CDH1-208ENST00000565810 RNASE1P07998 156 aaKnown RBP6.21□□□□□ -1.42
CDH1-208ENST00000565810 SAA1P0DJI8 122 aaPredicted RBP6.21□□□□□ -1.42
CDH1-208ENST00000565810 CNTFRP26992 372 aa6.21□□□□□ -1.42
CDH1-208ENST00000565810 C5orf64Q2M2E5 130 aa6.21□□□□□ -1.42
CDH1-208ENST00000565810 C9orf152Q5JTZ5 239 aa6.21□□□□□ -1.42
CDH1-208ENST00000565810 OR4A47Q6IF82 309 aa6.21□□□□□ -1.42
CDH1-208ENST00000565810 LYZL2Q7Z4W2 148 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms