RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 ZNF626Q68DY1 528 aa4.87□□□□□ -1.63
UBFD1-204ENST00000565634 SLC25A48Q6ZT89 311 aaKnown RBP4.87□□□□□ -1.63
UBFD1-204ENST00000565634 C9orf139Q6ZV77 190 aa4.87□□□□□ -1.63
UBFD1-204ENST00000565634 TMEM229BQ8NBD8 167 aa4.87□□□□□ -1.63
UBFD1-204ENST00000565634 OR4A4PQ8NGN8 299 aa4.87□□□□□ -1.63
UBFD1-204ENST00000565634 YPEL2Q96QA6 119 aa4.87□□□□□ -1.63
UBFD1-204ENST00000565634 CLEC7AQ9BXN2 247 aa4.87□□□□□ -1.63
UBFD1-204ENST00000565634 TOLLIPQ9H0E2 274 aa4.87□□□□□ -1.63
UBFD1-204ENST00000565634 IFI27L2Q9H2X8 130 aa4.87□□□□□ -1.63
UBFD1-204ENST00000565634 SCPEP1Q9HB40 452 aa4.87□□□□□ -1.63
UBFD1-204ENST00000565634 IFT46Q9NQC8 304 aa4.87□□□□□ -1.63
UBFD1-204ENST00000565634 ABCB10Q9NRK6 738 aa4.87□□□□□ -1.63
UBFD1-204ENST00000565634 EHFQ9NZC4 300 aa4.87□□□□□ -1.63
UBFD1-204ENST00000565634 GNG12Q9UBI6 72 aa4.87□□□□□ -1.63
UBFD1-204ENST00000565634 TBC1D24Q9ULP9 559 aa4.87□□□□□ -1.63
UBFD1-204ENST00000565634 FLVCR2Q9UPI3 526 aa4.87□□□□□ -1.63
UBFD1-204ENST00000565634 LYSTQ99698 3801 aa4.87□□□□□ -1.63
UBFD1-204ENST00000565634 LINC00473A8K010 186 aa4.86□□□□□ -1.63
UBFD1-204ENST00000565634 HSD17B6O14756 317 aa4.86□□□□□ -1.63
UBFD1-204ENST00000565634 TSPAN4O14817 238 aa4.86□□□□□ -1.63
UBFD1-204ENST00000565634 TNFSF12O43508 249 aa4.86□□□□□ -1.63
UBFD1-204ENST00000565634 SCGNO76038 276 aa4.86□□□□□ -1.63
UBFD1-204ENST00000565634 TPPPO94811 219 aa4.86□□□□□ -1.63
UBFD1-204ENST00000565634 RAB3DO95716 219 aa4.86□□□□□ -1.63
UBFD1-204ENST00000565634 ZBTB25P24278 435 aa4.86□□□□□ -1.63
UBFD1-204ENST00000565634 CNTFRP26992 372 aa4.86□□□□□ -1.63
UBFD1-204ENST00000565634 PPP5CP53041 499 aa4.86□□□□□ -1.63
UBFD1-204ENST00000565634 FXYD4P59646 89 aa4.86□□□□□ -1.63
UBFD1-204ENST00000565634 ARPC4P59998 168 aa4.86□□□□□ -1.63
UBFD1-204ENST00000565634 ZNF45Q02386 682 aa4.86□□□□□ -1.63
UBFD1-204ENST00000565634 HLA-DRB5Q30154 266 aa4.86□□□□□ -1.63
UBFD1-204ENST00000565634 SPANXN2Q5MJ10 180 aa4.86□□□□□ -1.63
UBFD1-204ENST00000565634 C6orf183Q5T699 404 aa4.86□□□□□ -1.63
UBFD1-204ENST00000565634 TPTE2P1Q5T6R2 138 aa4.86□□□□□ -1.63
UBFD1-204ENST00000565634 NCR3LG1Q68D85 454 aa4.86□□□□□ -1.63
UBFD1-204ENST00000565634 STEAP1BQ6NZ63 245 aa4.86□□□□□ -1.63
UBFD1-204ENST00000565634 LINC00311Q8N616 119 aa4.86□□□□□ -1.63
UBFD1-204ENST00000565634 DRAM1Q8N682 238 aa4.86□□□□□ -1.63
UBFD1-204ENST00000565634 ZNF383Q8NA42 475 aa4.86□□□□□ -1.63
UBFD1-204ENST00000565634 ADAD2Q8NCV1 583 aaKnown RBP4.86□□□□□ -1.63
UBFD1-204ENST00000565634 OR51S1Q8NGJ8 323 aa4.86□□□□□ -1.63
UBFD1-204ENST00000565634 OR52M1Q8NGK5 317 aa4.86□□□□□ -1.63
UBFD1-204ENST00000565634 OR13C8Q8NGS7 320 aa4.86□□□□□ -1.63
UBFD1-204ENST00000565634 OR5H2Q8NGV7 314 aa4.86□□□□□ -1.63
UBFD1-204ENST00000565634 OR9G1Q8NH87 305 aa4.86□□□□□ -1.63
UBFD1-204ENST00000565634 OR10J5Q8NHC4 309 aa4.86□□□□□ -1.63
UBFD1-204ENST00000565634 MARCH1Q8TCQ1 289 aa4.86□□□□□ -1.63
UBFD1-204ENST00000565634 SECTM1Q8WVN6 248 aa4.86□□□□□ -1.63
UBFD1-204ENST00000565634 GIMAP1Q8WWP7 306 aa4.86□□□□□ -1.63
UBFD1-204ENST00000565634 ZNF2Q9BSG1 426 aaPredicted RBP4.86□□□□□ -1.63
UBFD1-204ENST00000565634 MRPL20Q9BYC9 149 aaKnown RBP4.86□□□□□ -1.63
UBFD1-204ENST00000565634 FXYD6Q9H0Q3 95 aa4.86□□□□□ -1.63
UBFD1-204ENST00000565634 GAL3ST2Q9H3Q3 398 aa4.86□□□□□ -1.63
UBFD1-204ENST00000565634 C16orf95Q9H693 158 aa4.86□□□□□ -1.63
UBFD1-204ENST00000565634 HEXA-AS1Q9H8Q6 139 aa4.86□□□□□ -1.63
UBFD1-204ENST00000565634 PALMDQ9NP74 551 aa4.86□□□□□ -1.63
UBFD1-204ENST00000565634 SDHAF2Q9NX18 166 aa4.86□□□□□ -1.63
UBFD1-204ENST00000565634 HERC2O95714 4834 aa4.86□□□□□ -1.63
UBFD1-204ENST00000565634 SAA2-SAA4A0A096LPE2 208 aa4.85□□□□□ -1.63
UBFD1-204ENST00000565634 A0A1W2PPI3 338 aa4.85□□□□□ -1.63
UBFD1-204ENST00000565634 LINC01548A6NM66 108 aa4.85□□□□□ -1.63
UBFD1-204ENST00000565634 SRRM4A7MD48 611 aaKnown RBP4.85□□□□□ -1.63
UBFD1-204ENST00000565634 TOR1AO14656 332 aa4.85□□□□□ -1.63
UBFD1-204ENST00000565634 HSPA12AO43301 675 aa4.85□□□□□ -1.63
UBFD1-204ENST00000565634 SPRY2O43597 315 aa4.85□□□□□ -1.63
UBFD1-204ENST00000565634 PPYP01298 95 aa4.85□□□□□ -1.63
UBFD1-204ENST00000565634 RBP4P02753 201 aa4.85□□□□□ -1.63
UBFD1-204ENST00000565634 SAA2P0DJI9 122 aaPredicted RBP4.85□□□□□ -1.63
UBFD1-204ENST00000565634 PTBP1P26599 531 aaKnown RBP eCLIP4.85□□□□□ -1.63
UBFD1-204ENST00000565634 RCVRNP35243 200 aa4.85□□□□□ -1.63
UBFD1-204ENST00000565634 RANBP1P43487 201 aa4.85□□□□□ -1.63
UBFD1-204ENST00000565634 CBX5P45973 191 aa4.85□□□□□ -1.63
UBFD1-204ENST00000565634 IER3P46695 156 aa4.85□□□□□ -1.63
UBFD1-204ENST00000565634 PRRX1P54821 245 aa4.85□□□□□ -1.63
UBFD1-204ENST00000565634 F2RL1P55085 397 aa4.85□□□□□ -1.63
UBFD1-204ENST00000565634 MRPS15P82914 257 aaKnown RBP4.85□□□□□ -1.63
UBFD1-204ENST00000565634 HNF4GQ14541 408 aa4.85□□□□□ -1.63
UBFD1-204ENST00000565634 LY6EQ16553 131 aa4.85□□□□□ -1.63
UBFD1-204ENST00000565634 Q3ZCU0 254 aa4.85□□□□□ -1.63
UBFD1-204ENST00000565634 ZNF57Q68EA5 555 aaPredicted RBP4.85□□□□□ -1.63
UBFD1-204ENST00000565634 DHRS7BQ6IAN0 325 aaPredicted RBP4.85□□□□□ -1.63
UBFD1-204ENST00000565634 ZNF818PQ6ZRF7 136 aa4.85□□□□□ -1.63
UBFD1-204ENST00000565634 LHFPL1Q86WI0 220 aa4.85□□□□□ -1.63
UBFD1-204ENST00000565634 KLHDC1Q8N7A1 406 aa4.85□□□□□ -1.63
UBFD1-204ENST00000565634 GDPD1Q8N9F7 314 aa4.85□□□□□ -1.63
UBFD1-204ENST00000565634 BEND2Q8NDZ0 799 aa4.85□□□□□ -1.63
UBFD1-204ENST00000565634 OR10A7Q8NGE5 316 aa4.85□□□□□ -1.63
UBFD1-204ENST00000565634 OR13D1Q8NGV5 346 aa4.85□□□□□ -1.63
UBFD1-204ENST00000565634 GINS4Q9BRT9 223 aa4.85□□□□□ -1.63
UBFD1-204ENST00000565634 RTBDNQ9BSG5 229 aaPredicted RBP4.85□□□□□ -1.63
UBFD1-204ENST00000565634 ABHD14AQ9BUJ0 271 aa4.85□□□□□ -1.63
UBFD1-204ENST00000565634 SLC5A7Q9GZV3 580 aa4.85□□□□□ -1.63
UBFD1-204ENST00000565634 PLSCR3Q9NRY6 295 aa4.85□□□□□ -1.63
UBFD1-204ENST00000565634 DPM3Q9P2X0 92 aa4.85□□□□□ -1.63
UBFD1-204ENST00000565634 VSIG4Q9Y279 399 aa4.85□□□□□ -1.63
UBFD1-204ENST00000565634 OR2W1Q9Y3N9 320 aa4.85□□□□□ -1.63
UBFD1-204ENST00000565634 SORL1Q92673 2214 aa4.84□□□□□ -1.63
UBFD1-204ENST00000565634 IGHV1-3A0A0C4DH29 117 aa4.84□□□□□ -1.63
UBFD1-204ENST00000565634 NPIPB5A8MRT5 1133 aa4.84□□□□□ -1.63
UBFD1-204ENST00000565634 FCN1O00602 326 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms