RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 ACOT12Q8WYK0 555 aa18.08■□□□□ 0.48
RAB40C-209ENST00000565511 THAP7Q9BT49 309 aaPredicted RBP18.08■□□□□ 0.48
RAB40C-209ENST00000565511 RNF167Q9H6Y7 350 aa18.08■□□□□ 0.48
RAB40C-209ENST00000565511 DAPK2Q9UIK4 370 aa18.08■□□□□ 0.48
RAB40C-209ENST00000565511 IZUMO1RA6ND01 250 aa18.07■□□□□ 0.48
RAB40C-209ENST00000565511 FCGR3BO75015 233 aa18.07■□□□□ 0.48
RAB40C-209ENST00000565511 HLA-DQB1P01920 261 aa18.07■□□□□ 0.48
RAB40C-209ENST00000565511 BRWD1-AS2P59051 145 aa18.07■□□□□ 0.48
RAB40C-209ENST00000565511 EIF4EBP1Q13541 118 aaPredicted RBP18.07■□□□□ 0.48
RAB40C-209ENST00000565511 VKORC1L1Q8N0U8 176 aa18.07■□□□□ 0.48
RAB40C-209ENST00000565511 OSR1Q8TAX0 266 aaPredicted RBP18.07■□□□□ 0.48
RAB40C-209ENST00000565511 GPHA2Q96T91 129 aa18.07■□□□□ 0.48
RAB40C-209ENST00000565511 TM2D3Q9BRN9 247 aa18.07■□□□□ 0.48
RAB40C-209ENST00000565511 OR51E2Q9H255 320 aa18.07■□□□□ 0.48
RAB40C-209ENST00000565511 AKIP1Q9NQ31 210 aa18.07■□□□□ 0.48
RAB40C-209ENST00000565511 RBMX2Q9Y388 322 aaKnown RBP18.07■□□□□ 0.48
RAB40C-209ENST00000565511 OR2W1Q9Y3N9 320 aa18.07■□□□□ 0.48
RAB40C-209ENST00000565511 LYSTQ99698 3801 aa18.07■□□□□ 0.48
RAB40C-209ENST00000565511 BMPR1BO00238 502 aa18.06■□□□□ 0.48
RAB40C-209ENST00000565511 AADACP22760 399 aa18.06■□□□□ 0.48
RAB40C-209ENST00000565511 RHOGP84095 191 aa18.06■□□□□ 0.48
RAB40C-209ENST00000565511 CDK10Q15131 360 aa18.06■□□□□ 0.48
RAB40C-209ENST00000565511 CASC10Q5T4H9 136 aa18.06■□□□□ 0.48
RAB40C-209ENST00000565511 KCTD9Q7L273 389 aa18.06■□□□□ 0.48
RAB40C-209ENST00000565511 RRP15Q9Y3B9 282 aaKnown RBP18.06■□□□□ 0.48
RAB40C-209ENST00000565511 A0A1B0GW64 132 aa18.05■□□□□ 0.48
RAB40C-209ENST00000565511 MRPS14O60783 128 aaKnown RBP18.05■□□□□ 0.48
RAB40C-209ENST00000565511 ATP6V1G2O95670 118 aa18.05■□□□□ 0.48
RAB40C-209ENST00000565511 PTHLHP12272 177 aa18.05■□□□□ 0.48
RAB40C-209ENST00000565511 SFXN4Q6P4A7 337 aa18.05■□□□□ 0.48
RAB40C-209ENST00000565511 ADAMTSL5Q6ZMM2 481 aa18.05■□□□□ 0.48
RAB40C-209ENST00000565511 OR5H6Q8NGV6 325 aa18.05■□□□□ 0.48
RAB40C-209ENST00000565511 USMG5Q96IX5 58 aa18.05■□□□□ 0.48
RAB40C-209ENST00000565511 TRBV9A0A0B4J1U6 114 aa18.04■□□□□ 0.48
RAB40C-209ENST00000565511 HMX3A6NHT5 357 aa18.04■□□□□ 0.48
RAB40C-209ENST00000565511 TUSC2O75896 110 aa18.04■□□□□ 0.48
RAB40C-209ENST00000565511 EDN2P20800 178 aa18.04■□□□□ 0.48
RAB40C-209ENST00000565511 EXOSC2Q13868 293 aaKnown RBP18.04■□□□□ 0.48
RAB40C-209ENST00000565511 SLC25A38Q96DW6 304 aa18.04■□□□□ 0.48
RAB40C-209ENST00000565511 GAR1Q9NY12 217 aaKnown RBP18.04■□□□□ 0.48
RAB40C-209ENST00000565511 TEX22C9J3V5 150 aa18.03■□□□□ 0.48
RAB40C-209ENST00000565511 E7EUB6 86 aa18.03■□□□□ 0.48
RAB40C-209ENST00000565511 MPPED1O15442 326 aa18.03■□□□□ 0.48
RAB40C-209ENST00000565511 SDC2P34741 201 aa18.03■□□□□ 0.48
RAB40C-209ENST00000565511 ARL6IP1Q15041 203 aa18.03■□□□□ 0.48
RAB40C-209ENST00000565511 RPEL1Q2QD12 228 aa18.03■□□□□ 0.48
RAB40C-209ENST00000565511 CNIH2Q6PI25 160 aa18.03■□□□□ 0.48
RAB40C-209ENST00000565511 DCSTAMPQ9H295 470 aa18.03■□□□□ 0.48
RAB40C-209ENST00000565511 RHBDL2Q9NX52 303 aa18.03■□□□□ 0.48
RAB40C-209ENST00000565511 A8MZ25 164 aa18.02■□□□□ 0.48
RAB40C-209ENST00000565511 MECP2P51608 486 aaKnown RBP18.02■□□□□ 0.48
RAB40C-209ENST00000565511 GNG2P59768 71 aa18.02■□□□□ 0.48
RAB40C-209ENST00000565511 MXD1Q05195 221 aa18.02■□□□□ 0.48
RAB40C-209ENST00000565511 DCUN1D5Q9BTE7 237 aa18.02■□□□□ 0.48
RAB40C-209ENST00000565511 ZMAT4Q9H898 229 aa18.02■□□□□ 0.48
RAB40C-209ENST00000565511 ANXA10Q9UJ72 324 aa18.02■□□□□ 0.48
RAB40C-209ENST00000565511 DMRT1Q9Y5R6 373 aa18.02■□□□□ 0.48
RAB40C-209ENST00000565511 IL6RP08887 468 aaPredicted RBP18.01■□□□□ 0.47
RAB40C-209ENST00000565511 MYOD1P15172 320 aa18.01■□□□□ 0.47
RAB40C-209ENST00000565511 TPRA1Q86W33 373 aa18.01■□□□□ 0.47
RAB40C-209ENST00000565511 SGPP2Q8IWX5 399 aa18.01■□□□□ 0.47
RAB40C-209ENST00000565511 MMD2Q8IY49 270 aa18.01■□□□□ 0.47
RAB40C-209ENST00000565511 PUSL1Q8N0Z8 303 aaKnown RBP18.01■□□□□ 0.47
RAB40C-209ENST00000565511 TTC9CQ8N5M4 171 aa18.01■□□□□ 0.47
RAB40C-209ENST00000565511 GVQW1Q8N7I0 195 aa18.01■□□□□ 0.47
RAB40C-209ENST00000565511 TCTEX1D2Q8WW35 142 aa18.01■□□□□ 0.47
RAB40C-209ENST00000565511 CITED4Q96RK1 184 aa18.01■□□□□ 0.47
RAB40C-209ENST00000565511 SPATA2Q9UM82 520 aa18.01■□□□□ 0.47
RAB40C-209ENST00000565511 SSR3Q9UNL2 185 aa18.01■□□□□ 0.47
RAB40C-209ENST00000565511 FAM223BA6NKX1 122 aa18■□□□□ 0.47
RAB40C-209ENST00000565511 OR2J3O76001 311 aa18■□□□□ 0.47
RAB40C-209ENST00000565511 OR2A4O95047 310 aa18■□□□□ 0.47
RAB40C-209ENST00000565511 CTXN2P0C2S0 81 aa18■□□□□ 0.47
RAB40C-209ENST00000565511 FAM223AQ8IWN6 122 aa18■□□□□ 0.47
RAB40C-209ENST00000565511 FCGR1BQ92637 280 aa18■□□□□ 0.47
RAB40C-209ENST00000565511 CENPOQ9BU64 300 aa18■□□□□ 0.47
RAB40C-209ENST00000565511 TAS2R8Q9NYW2 309 aa18■□□□□ 0.47
RAB40C-209ENST00000565511 SIGLEC8Q9NYZ4 499 aa18■□□□□ 0.47
RAB40C-209ENST00000565511 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.99■□□□□ 0.47
RAB40C-209ENST00000565511 PPP5D1E7EU14 171 aa17.99■□□□□ 0.47
RAB40C-209ENST00000565511 KBTBD11O94819 623 aa17.99■□□□□ 0.47
RAB40C-209ENST00000565511 FCER2P06734 321 aa17.99■□□□□ 0.47
RAB40C-209ENST00000565511 CD36P16671 472 aa17.99■□□□□ 0.47
RAB40C-209ENST00000565511 ATP5G2Q06055 141 aa17.99■□□□□ 0.47
RAB40C-209ENST00000565511 ZNF773Q6PK81 442 aa17.99■□□□□ 0.47
RAB40C-209ENST00000565511 SNAPC3Q92966 411 aa17.99■□□□□ 0.47
RAB40C-209ENST00000565511 SPIN2AQ99865 258 aa17.99■□□□□ 0.47
RAB40C-209ENST00000565511 SPIN2BQ9BPZ2 258 aa17.99■□□□□ 0.47
RAB40C-209ENST00000565511 EDA2RQ9HAV5 297 aa17.99■□□□□ 0.47
RAB40C-209ENST00000565511 PRELID3BQ9Y3B1 194 aa17.99■□□□□ 0.47
RAB40C-209ENST00000565511 H0Y980 276 aa17.98■□□□□ 0.47
RAB40C-209ENST00000565511 HLA-AP01891 365 aaKnown RBP17.98■□□□□ 0.47
RAB40C-209ENST00000565511 HAGHQ16775 308 aa17.98■□□□□ 0.47
RAB40C-209ENST00000565511 MFSD4AQ8N468 514 aa17.98■□□□□ 0.47
RAB40C-209ENST00000565511 OR4S2Q8NH73 311 aa17.98■□□□□ 0.47
RAB40C-209ENST00000565511 CCL28Q9NRJ3 127 aa17.98■□□□□ 0.47
RAB40C-209ENST00000565511 MRPS7Q9Y2R9 242 aaKnown RBP17.98■□□□□ 0.47
RAB40C-209ENST00000565511 DNAH1Q9P2D7 4330 aa17.98■□□□□ 0.47
RAB40C-209ENST00000565511 TRAV18A0A075B6X5 111 aa17.97■□□□□ 0.47
RAB40C-209ENST00000565511 CGB1A6NKQ9 187 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms