RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 HPRT1P00492 218 aa3.95□□□□□ -1.78
CAPN3-212ENST00000564503 KRASP01116 189 aa3.95□□□□□ -1.78
CAPN3-212ENST00000564503 IGKV1D-33P01593 117 aa3.95□□□□□ -1.78
CAPN3-212ENST00000564503 IGKV1-33P01594 117 aa3.95□□□□□ -1.78
CAPN3-212ENST00000564503 IGKV1-39P01597 117 aa3.95□□□□□ -1.78
CAPN3-212ENST00000564503 IGKV1-5P01602 117 aa3.95□□□□□ -1.78
CAPN3-212ENST00000564503 IGKV1D-39P04432 117 aa3.95□□□□□ -1.78
CAPN3-212ENST00000564503 LIFP15018 202 aa3.95□□□□□ -1.78
CAPN3-212ENST00000564503 COX5AP20674 150 aa3.95□□□□□ -1.78
CAPN3-212ENST00000564503 BRS3P32247 399 aa3.95□□□□□ -1.78
CAPN3-212ENST00000564503 SOX8P57073 446 aa3.95□□□□□ -1.78
CAPN3-212ENST00000564503 FOXL2P58012 376 aa3.95□□□□□ -1.78
CAPN3-212ENST00000564503 SELENOTP62341 195 aa3.95□□□□□ -1.78
CAPN3-212ENST00000564503 GNB2P62879 340 aa3.95□□□□□ -1.78
CAPN3-212ENST00000564503 PSG4Q00888 419 aa3.95□□□□□ -1.78
CAPN3-212ENST00000564503 HYAL1Q12794 435 aa3.95□□□□□ -1.78
CAPN3-212ENST00000564503 MSMO1Q15800 293 aa3.95□□□□□ -1.78
CAPN3-212ENST00000564503 CLEC12BQ2HXU8 276 aa3.95□□□□□ -1.78
CAPN3-212ENST00000564503 TMEM249Q2WGJ8 235 aa3.95□□□□□ -1.78
CAPN3-212ENST00000564503 CEACAM21Q3KPI0 293 aa3.95□□□□□ -1.78
CAPN3-212ENST00000564503 FFAR4Q5NUL3 377 aa3.95□□□□□ -1.78
CAPN3-212ENST00000564503 SPATA46Q5T0L3 261 aa3.95□□□□□ -1.78
CAPN3-212ENST00000564503 RIPPLY2Q5TAB7 128 aa3.95□□□□□ -1.78
CAPN3-212ENST00000564503 PRAMEF20Q5VT98 475 aa3.95□□□□□ -1.78
CAPN3-212ENST00000564503 VWA1Q6PCB0 445 aa3.95□□□□□ -1.78
CAPN3-212ENST00000564503 TOMM20LQ6UXN7 152 aa3.95□□□□□ -1.78
CAPN3-212ENST00000564503 MOB1BQ7L9L4 216 aa3.95□□□□□ -1.78
CAPN3-212ENST00000564503 AAED1Q7RTV5 226 aa3.95□□□□□ -1.78
CAPN3-212ENST00000564503 BATF2Q8N1L9 274 aa3.95□□□□□ -1.78
CAPN3-212ENST00000564503 RPP25LQ8N5L8 163 aaKnown RBP3.95□□□□□ -1.78
CAPN3-212ENST00000564503 OR51H1Q8NH63 302 aa3.95□□□□□ -1.78
CAPN3-212ENST00000564503 PSMF1Q92530 271 aa3.95□□□□□ -1.78
CAPN3-212ENST00000564503 GMPPAQ96IJ6 420 aaPredicted RBP3.95□□□□□ -1.78
CAPN3-212ENST00000564503 VAMP8Q9BV40 100 aa3.95□□□□□ -1.78
CAPN3-212ENST00000564503 C1QTNF5Q9BXJ0 243 aa3.95□□□□□ -1.78
CAPN3-212ENST00000564503 OR51B6Q9H340 312 aa3.95□□□□□ -1.78
CAPN3-212ENST00000564503 UBE2ZQ9H832 354 aaPredicted RBP3.95□□□□□ -1.78
CAPN3-212ENST00000564503 LPAR2Q9HBW0 351 aa3.95□□□□□ -1.78
CAPN3-212ENST00000564503 HEYLQ9NQ87 328 aaPredicted RBP3.95□□□□□ -1.78
CAPN3-212ENST00000564503 KCNIP2Q9NS61 270 aa3.95□□□□□ -1.78
CAPN3-212ENST00000564503 TMEM106BQ9NUM4 274 aa3.95□□□□□ -1.78
CAPN3-212ENST00000564503 ELOVL5Q9NYP7 299 aa3.95□□□□□ -1.78
CAPN3-212ENST00000564503 ERRFI1Q9UJM3 462 aaPredicted RBP3.95□□□□□ -1.78
CAPN3-212ENST00000564503 CHCHD2Q9Y6H1 151 aaPredicted RBP3.95□□□□□ -1.78
CAPN3-212ENST00000564503 HTTP42858 3142 aa3.95□□□□□ -1.78
CAPN3-212ENST00000564503 COL27A1Q8IZC6 1860 aaPredicted RBP3.94□□□□□ -1.78
CAPN3-212ENST00000564503 TRBV9A0A0B4J1U6 114 aa3.94□□□□□ -1.78
CAPN3-212ENST00000564503 ZNF716A6NP11 495 aa3.94□□□□□ -1.78
CAPN3-212ENST00000564503 PMS2P5A8MQ11 134 aa3.94□□□□□ -1.78
CAPN3-212ENST00000564503 C11orf94C9JXX5 98 aa3.94□□□□□ -1.78
CAPN3-212ENST00000564503 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.94□□□□□ -1.78
CAPN3-212ENST00000564503 ZIC3O60481 467 aa3.94□□□□□ -1.78
CAPN3-212ENST00000564503 RBMXL2O75526 392 aaKnown RBP3.94□□□□□ -1.78
CAPN3-212ENST00000564503 SCRG1O75711 98 aa3.94□□□□□ -1.78
CAPN3-212ENST00000564503 CBR3O75828 277 aa3.94□□□□□ -1.78
CAPN3-212ENST00000564503 MMP23AO75900 390 aa3.94□□□□□ -1.78
CAPN3-212ENST00000564503 CLDN1O95832 211 aa3.94□□□□□ -1.78
CAPN3-212ENST00000564503 IL6RP08887 468 aaPredicted RBP3.94□□□□□ -1.78
CAPN3-212ENST00000564503 NPSP0C0P6 89 aa3.94□□□□□ -1.78
CAPN3-212ENST00000564503 IRF2P14316 349 aa3.94□□□□□ -1.78
CAPN3-212ENST00000564503 B4GALT1P15291 398 aa3.94□□□□□ -1.78
CAPN3-212ENST00000564503 KITLGP21583 273 aa3.94□□□□□ -1.78
CAPN3-212ENST00000564503 GATA3P23771 443 aa3.94□□□□□ -1.78
CAPN3-212ENST00000564503 CHRNA7P36544 502 aa3.94□□□□□ -1.78
CAPN3-212ENST00000564503 CDC34P49427 236 aaPredicted RBP3.94□□□□□ -1.78
CAPN3-212ENST00000564503 NXPH1P58417 271 aa3.94□□□□□ -1.78
CAPN3-212ENST00000564503 MRPS11P82912 194 aaKnown RBP3.94□□□□□ -1.78
CAPN3-212ENST00000564503 RPL19P84098 196 aaKnown RBP3.94□□□□□ -1.78
CAPN3-212ENST00000564503 TRA2AQ13595 282 aaKnown RBP eCLIP3.94□□□□□ -1.78
CAPN3-212ENST00000564503 VWC2Q2TAL6 325 aa3.94□□□□□ -1.78
CAPN3-212ENST00000564503 CEACAM16Q2WEN9 425 aa3.94□□□□□ -1.78
CAPN3-212ENST00000564503 COX19Q49B96 90 aa3.94□□□□□ -1.78
CAPN3-212ENST00000564503 COL5A1-AS1Q5SY13 56 aa3.94□□□□□ -1.78
CAPN3-212ENST00000564503 TPTE2P1Q5T6R2 138 aa3.94□□□□□ -1.78
CAPN3-212ENST00000564503 CYB5R2Q6BCY4 276 aa3.94□□□□□ -1.78
CAPN3-212ENST00000564503 OR8G2PQ6IF36 304 aa3.94□□□□□ -1.78
CAPN3-212ENST00000564503 SYT13Q7L8C5 426 aa3.94□□□□□ -1.78
CAPN3-212ENST00000564503 MRPL21Q7Z2W9 205 aaKnown RBP3.94□□□□□ -1.78
CAPN3-212ENST00000564503 NUFIP2Q7Z417 695 aaKnown RBP3.94□□□□□ -1.78
CAPN3-212ENST00000564503 LINC01551Q86U37 167 aa3.94□□□□□ -1.78
CAPN3-212ENST00000564503 MCEMP1Q8IX19 187 aa3.94□□□□□ -1.78
CAPN3-212ENST00000564503 TMEM256Q8N2U0 113 aa3.94□□□□□ -1.78
CAPN3-212ENST00000564503 DEFB119Q8N690 84 aa3.94□□□□□ -1.78
CAPN3-212ENST00000564503 ZNF709Q8N972 641 aa3.94□□□□□ -1.78
CAPN3-212ENST00000564503 TSTD1Q8NFU3 115 aa3.94□□□□□ -1.78
CAPN3-212ENST00000564503 OR5T1Q8NG75 326 aa3.94□□□□□ -1.78
CAPN3-212ENST00000564503 OR10P1Q8NGE3 313 aa3.94□□□□□ -1.78
CAPN3-212ENST00000564503 OR4B1Q8NGF8 309 aa3.94□□□□□ -1.78
CAPN3-212ENST00000564503 OR5A2Q8NGI9 324 aa3.94□□□□□ -1.78
CAPN3-212ENST00000564503 GATAD1Q8WUU5 269 aa3.94□□□□□ -1.78
CAPN3-212ENST00000564503 OR5P3Q8WZ94 311 aa3.94□□□□□ -1.78
CAPN3-212ENST00000564503 RAB1CQ92928 201 aa3.94□□□□□ -1.78
CAPN3-212ENST00000564503 FAM122AQ96E09 287 aa3.94□□□□□ -1.78
CAPN3-212ENST00000564503 SDSLQ96GA7 329 aa3.94□□□□□ -1.78
CAPN3-212ENST00000564503 THOC3Q96J01 351 aaKnown RBP3.94□□□□□ -1.78
CAPN3-212ENST00000564503 WFIKKN1Q96NZ8 548 aa3.94□□□□□ -1.78
CAPN3-212ENST00000564503 CIB3Q96Q77 187 aaPredicted RBP3.94□□□□□ -1.78
CAPN3-212ENST00000564503 NPCDR1Q9BY65 106 aa3.94□□□□□ -1.78
CAPN3-212ENST00000564503 SRXN1Q9BYN0 137 aa3.94□□□□□ -1.78
CAPN3-212ENST00000564503 PKIBQ9C010 78 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms