RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 SAP30O75446 220 aa15.38■□□□□ 0.05
SHCBP1-203ENST00000564272 CD69Q07108 199 aa15.38■□□□□ 0.05
SHCBP1-203ENST00000564272 UBE2NLQ5JXB2 153 aa15.38■□□□□ 0.05
SHCBP1-203ENST00000564272 CROCCP3Q8IVE0 287 aa15.38■□□□□ 0.05
SHCBP1-203ENST00000564272 VKORC1L1Q8N0U8 176 aa15.38■□□□□ 0.05
SHCBP1-203ENST00000564272 SECTM1Q8WVN6 248 aa15.38■□□□□ 0.05
SHCBP1-203ENST00000564272 SRSF12Q8WXF0 261 aaKnown RBP15.38■□□□□ 0.05
SHCBP1-203ENST00000564272 SNAPC3Q92966 411 aa15.38■□□□□ 0.05
SHCBP1-203ENST00000564272 TMEM68Q96MH6 324 aa15.38■□□□□ 0.05
SHCBP1-203ENST00000564272 HSD17B10Q99714 261 aaKnown RBP15.38■□□□□ 0.05
SHCBP1-203ENST00000564272 COA4Q9NYJ1 87 aa15.38■□□□□ 0.05
SHCBP1-203ENST00000564272 ZNF256Q9Y2P7 627 aaPredicted RBP15.38■□□□□ 0.05
SHCBP1-203ENST00000564272 INSL3P51460 131 aa15.37■□□□□ 0.05
SHCBP1-203ENST00000564272 DCTN2Q13561 401 aaKnown RBP15.37■□□□□ 0.05
SHCBP1-203ENST00000564272 CDK10Q15131 360 aa15.37■□□□□ 0.05
SHCBP1-203ENST00000564272 C10orf55Q5SWW7 151 aa15.37■□□□□ 0.05
SHCBP1-203ENST00000564272 ZNF429Q86V71 674 aa15.37■□□□□ 0.05
SHCBP1-203ENST00000564272 SAMD12Q8N8I0 201 aa15.37■□□□□ 0.05
SHCBP1-203ENST00000564272 OR13F1Q8NGS4 319 aa15.37■□□□□ 0.05
SHCBP1-203ENST00000564272 OR4S2Q8NH73 311 aa15.37■□□□□ 0.05
SHCBP1-203ENST00000564272 TINAGL1Q9GZM7 467 aaPredicted RBP15.37■□□□□ 0.05
SHCBP1-203ENST00000564272 CCL28Q9NRJ3 127 aa15.37■□□□□ 0.05
SHCBP1-203ENST00000564272 LSM4Q9Y4Z0 139 aaKnown RBP15.37■□□□□ 0.05
SHCBP1-203ENST00000564272 ANKRD34BA5PLL1 514 aa15.36■□□□□ 0.05
SHCBP1-203ENST00000564272 TRIM64CA6NLI5 447 aa15.36■□□□□ 0.05
SHCBP1-203ENST00000564272 TNFSF12O43508 249 aa15.36■□□□□ 0.05
SHCBP1-203ENST00000564272 XRCC3O43542 346 aa15.36■□□□□ 0.05
SHCBP1-203ENST00000564272 LY86O95711 162 aa15.36■□□□□ 0.05
SHCBP1-203ENST00000564272 PPYP01298 95 aa15.36■□□□□ 0.05
SHCBP1-203ENST00000564272 BRWD1-AS2P59051 145 aa15.36■□□□□ 0.05
SHCBP1-203ENST00000564272 MFSD4AQ8N468 514 aa15.36■□□□□ 0.05
SHCBP1-203ENST00000564272 ADAD2Q8NCV1 583 aaKnown RBP15.36■□□□□ 0.05
SHCBP1-203ENST00000564272 COL7A1Q02388 2944 aa15.36■□□□□ 0.05
SHCBP1-203ENST00000564272 DNAH9Q9NYC9 4486 aa15.35■□□□□ 0.05
SHCBP1-203ENST00000564272 A0A0G2JLM5 398 aa15.35■□□□□ 0.05
SHCBP1-203ENST00000564272 MPPED1O15442 326 aa15.35■□□□□ 0.05
SHCBP1-203ENST00000564272 RBMXL2O75526 392 aaKnown RBP15.35■□□□□ 0.05
SHCBP1-203ENST00000564272 CBX5P45973 191 aa15.35■□□□□ 0.05
SHCBP1-203ENST00000564272 FXYD4P59646 89 aa15.35■□□□□ 0.05
SHCBP1-203ENST00000564272 NCS1P62166 190 aa15.35■□□□□ 0.05
SHCBP1-203ENST00000564272 DYRK1AQ13627 763 aa15.35■□□□□ 0.05
SHCBP1-203ENST00000564272 ACSM6Q6P461 480 aa15.35■□□□□ 0.05
SHCBP1-203ENST00000564272 S100A16Q96FQ6 103 aaKnown RBP15.35■□□□□ 0.05
SHCBP1-203ENST00000564272 FUNDC2Q9BWH2 189 aa15.35■□□□□ 0.05
SHCBP1-203ENST00000564272 IFT46Q9NQC8 304 aa15.35■□□□□ 0.05
SHCBP1-203ENST00000564272 CREBL2O60519 120 aaPredicted RBP15.34■□□□□ 0.05
SHCBP1-203ENST00000564272 ACTL6BO94805 426 aa15.34■□□□□ 0.05
SHCBP1-203ENST00000564272 BRI3O95415 125 aa15.34■□□□□ 0.05
SHCBP1-203ENST00000564272 OR9G9P0C7N8 305 aa15.34■□□□□ 0.05
SHCBP1-203ENST00000564272 TAS2R20P59543 309 aa15.34■□□□□ 0.05
SHCBP1-203ENST00000564272 TMEM69Q5SWH9 247 aa15.34■□□□□ 0.05
SHCBP1-203ENST00000564272 ZNF66Q6ZN08 573 aa15.34■□□□□ 0.05
SHCBP1-203ENST00000564272 MMD2Q8IY49 270 aa15.34■□□□□ 0.05
SHCBP1-203ENST00000564272 OR5AP2Q8NGF4 316 aa15.34■□□□□ 0.05
SHCBP1-203ENST00000564272 SLC25A46Q96AG3 418 aa15.34■□□□□ 0.05
SHCBP1-203ENST00000564272 SLC5A7Q9GZV3 580 aa15.34■□□□□ 0.05
SHCBP1-203ENST00000564272 KBTBD11O94819 623 aa15.33■□□□□ 0.04
SHCBP1-203ENST00000564272 PRH1P02810 166 aa15.33■□□□□ 0.04
SHCBP1-203ENST00000564272 VBP1P61758 197 aa15.33■□□□□ 0.04
SHCBP1-203ENST00000564272 MSMO1Q15800 293 aa15.33■□□□□ 0.04
SHCBP1-203ENST00000564272 HAPLN4Q86UW8 402 aa15.33■□□□□ 0.04
SHCBP1-203ENST00000564272 PUSL1Q8N0Z8 303 aaKnown RBP15.33■□□□□ 0.04
SHCBP1-203ENST00000564272 RANGRFQ9HD47 186 aaPredicted RBP15.33■□□□□ 0.04
SHCBP1-203ENST00000564272 SORL1Q92673 2214 aa15.32■□□□□ 0.04
SHCBP1-203ENST00000564272 OR2A4O95047 310 aa15.32■□□□□ 0.04
SHCBP1-203ENST00000564272 TRBV12-3P01733 135 aa15.32■□□□□ 0.04
SHCBP1-203ENST00000564272 EIF4EP06730 217 aaKnown RBP15.32■□□□□ 0.04
SHCBP1-203ENST00000564272 SPNP16150 400 aa15.32■□□□□ 0.04
SHCBP1-203ENST00000564272 ZP3P21754 424 aa15.32■□□□□ 0.04
SHCBP1-203ENST00000564272 VAX1Q5SQQ9 334 aa15.32■□□□□ 0.04
SHCBP1-203ENST00000564272 SSX9Q7RTT3 188 aa15.32■□□□□ 0.04
SHCBP1-203ENST00000564272 TMEM17Q86X19 198 aa15.32■□□□□ 0.04
SHCBP1-203ENST00000564272 OR2A7Q96R45 310 aa15.32■□□□□ 0.04
SHCBP1-203ENST00000564272 EHFQ9NZC4 300 aa15.32■□□□□ 0.04
SHCBP1-203ENST00000564272 ANAPC10Q9UM13 185 aa15.32■□□□□ 0.04
SHCBP1-203ENST00000564272 HMX3A6NHT5 357 aa15.31■□□□□ 0.04
SHCBP1-203ENST00000564272 KIR2DS2P43631 304 aa15.31■□□□□ 0.04
SHCBP1-203ENST00000564272 ZNF45Q02386 682 aa15.31■□□□□ 0.04
SHCBP1-203ENST00000564272 ZNF343Q6P1L6 599 aa15.31■□□□□ 0.04
SHCBP1-203ENST00000564272 ZNF818PQ6ZRF7 136 aa15.31■□□□□ 0.04
SHCBP1-203ENST00000564272 VSTM2AQ8TAG5 236 aa15.31■□□□□ 0.04
SHCBP1-203ENST00000564272 TMEM167AQ8TBQ9 72 aa15.31■□□□□ 0.04
SHCBP1-203ENST00000564272 GIMAP1Q8WWP7 306 aa15.31■□□□□ 0.04
SHCBP1-203ENST00000564272 KCTD12Q96CX2 325 aaKnown RBP15.31■□□□□ 0.04
SHCBP1-203ENST00000564272 USMG5Q96IX5 58 aa15.31■□□□□ 0.04
SHCBP1-203ENST00000564272 OR4C12Q96R67 309 aa15.31■□□□□ 0.04
SHCBP1-203ENST00000564272 SPIN2AQ99865 258 aa15.31■□□□□ 0.04
SHCBP1-203ENST00000564272 SPIN2BQ9BPZ2 258 aa15.31■□□□□ 0.04
SHCBP1-203ENST00000564272 COMMD3Q9UBI1 195 aa15.31■□□□□ 0.04
SHCBP1-203ENST00000564272 ADAM30Q9UKF2 790 aa15.31■□□□□ 0.04
SHCBP1-203ENST00000564272 TEX22C9J3V5 150 aa15.3■□□□□ 0.04
SHCBP1-203ENST00000564272 SULT1C2O00338 296 aa15.3■□□□□ 0.04
SHCBP1-203ENST00000564272 SMIM18P0DKX4 95 aa15.3■□□□□ 0.04
SHCBP1-203ENST00000564272 RHOGP84095 191 aa15.3■□□□□ 0.04
SHCBP1-203ENST00000564272 C19orf35Q6ZS72 473 aa15.3■□□□□ 0.04
SHCBP1-203ENST00000564272 SPAG16Q8N0X2 631 aa15.3■□□□□ 0.04
SHCBP1-203ENST00000564272 ZBTB34Q8NCN2 500 aa15.3■□□□□ 0.04
SHCBP1-203ENST00000564272 OR6Q1Q8NGQ2 317 aa15.3■□□□□ 0.04
SHCBP1-203ENST00000564272 RSRP1Q9BUV0 290 aa15.3■□□□□ 0.04
SHCBP1-203ENST00000564272 AKIP1Q9NQ31 210 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms