RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 UBFD1O14562 309 aaKnown RBP0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 FADS1O60427 444 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 LY6HO94772 140 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 TCRBP04435 133 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 ARL14EPLP0DKL9 152 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 ESDP10768 282 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 SLC25A16P16260 332 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 CRHBPP24387 322 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 CRYBB3P26998 211 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 S100A2P29034 98 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 LPAR6P43657 344 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 OR4D2P58180 307 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 AP3S2P59780 193 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 PSME3P61289 254 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 ARF6P62330 175 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 TBPL1P62380 186 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 RANP62826 216 aaKnown RBP0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 HIST1H3AP68431 136 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 H3F3AP84243 136 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 TSPAN31Q12999 210 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 SRSF6Q13247 344 aaKnown RBP0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 ITGB3BPQ13352 177 aaPredicted RBP0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 HTR4Q13639 388 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 PMAIP1Q13794 54 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 EDDM3AQ14507 147 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 RSU1Q15404 277 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 ACOT6Q3I5F7 207 aaPredicted RBP0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 PCOTHQ58A44 107 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 NOXRED1Q6NXP6 359 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 ZNF322Q6U7Q0 402 aaPredicted RBP0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 HIST2H3AQ71DI3 136 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 GPHB5Q86YW7 130 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 DYNAPQ8N1N2 210 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 CLDN22Q8N7P3 220 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 OR10D4PQ8NGN7 298 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 OR1L8Q8NGR8 309 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 OR10A6Q8NH74 314 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 GNPNAT1Q96EK6 184 aaPredicted RBP0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 DIRAS2Q96HU8 199 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 IGF2BP2-AS1Q96M15 143 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 CCDC42Q96M95 316 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 TMEM109Q9BVC6 243 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 C20orf27Q9GZN8 174 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 PSTPIP2Q9H939 334 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 TXNL4BQ9NX01 149 aaKnown RBP0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 ANAPC10Q9UM13 185 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 HSPE1-MOB4S4R3N1 261 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 TRPM6Q9BX84 2022 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 NUP160Q12769 1436 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 LCTP09848 1927 aa0.87□□□□□ -2.27
HMGB1P33-201ENST00000563485 NUP155O75694 1391 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 SLIT2O94813 1529 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 C19orf71A6NCJ1 209 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 OR5K4A6NMS3 321 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 ODF3BA8MYP8 253 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 EVPLLA8MZ36 301 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 OR11H12B2RN74 326 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 TMEM114B3SHH9 223 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 EEF1E1-BLOC1S5C9J1V9 151 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 LST1O00453 97 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 COX7A2LO14548 114 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 TRAPPC3O43617 180 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 CHP2O43745 196 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 IGHV1-69P01742 117 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 C1QAP02745 245 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 TTRP02766 147 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 IFNA6P05013 189 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 REG1AP05451 166 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 CRYGDP07320 174 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 UCHL1P09936 223 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 FAM228BP0C875 321 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 GZMBP10144 247 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 CD79AP11912 226 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 CD36P16671 472 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 HIST1H1TP22492 207 aaPredicted RBP0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 PPP1CCP36873 323 aaKnown RBP0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 RPL27AP46776 148 aaKnown RBP0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 GABRA2P47869 451 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 GABRA4P48169 554 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 REG1BP48304 166 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 TCL1AP56279 114 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 RWDD2BP57060 319 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 SPCS3P61009 180 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 IFITM2Q01629 132 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 AESQ08117 197 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 FABP9Q0Z7S8 132 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 STX5Q13190 355 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 IAH1Q2TAA2 248 aaPredicted RBP0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 TMEM97Q5BJF2 176 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 TNFAIP8L3Q5GJ75 292 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 TMEM31Q5JXX7 168 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 CCDC121Q6ZUS5 278 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 TRAPPC5Q8IUR0 188 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 BAP18Q8IXM2 172 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 C20orf196Q8IYI0 205 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 OR4C16Q8NGL9 310 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 OR11H2Q8NH07 326 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 SGMS2Q8NHU3 365 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 LHFPL5Q8TAF8 219 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 RNASE6Q93091 150 aaKnown RBP0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms