RNA–Protein interactions for RNA: ENST00000563255.1

CDH11-207, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-207ENST00000563255 PRDM13Q9H4Q3 707 aa11.84□□□□□ -0.51
CDH11-207ENST00000563255 TET2Q6N021 2002 aaPredicted RBP11.83□□□□□ -0.52
CDH11-207ENST00000563255 IGHV3-72A0A0B4J1Y9 119 aa11.83□□□□□ -0.52
CDH11-207ENST00000563255 SSNA1O43805 119 aa11.83□□□□□ -0.52
CDH11-207ENST00000563255 S1PR2O95136 353 aa11.83□□□□□ -0.52
CDH11-207ENST00000563255 HRASP01112 189 aa11.83□□□□□ -0.52
CDH11-207ENST00000563255 NQO2P16083 231 aa11.83□□□□□ -0.52
CDH11-207ENST00000563255 PAX6P26367 422 aa11.83□□□□□ -0.52
CDH11-207ENST00000563255 LGALS7P47929 136 aa11.83□□□□□ -0.52
CDH11-207ENST00000563255 RRAS2P62070 204 aaPredicted RBP11.83□□□□□ -0.52
CDH11-207ENST00000563255 TUSC1Q2TAM9 212 aa11.83□□□□□ -0.52
CDH11-207ENST00000563255 LIN54Q6MZP7 749 aa11.83□□□□□ -0.52
CDH11-207ENST00000563255 BCL6BQ8N143 479 aaPredicted RBP11.83□□□□□ -0.52
CDH11-207ENST00000563255 SLC35G3Q8N808 338 aa11.83□□□□□ -0.52
CDH11-207ENST00000563255 OR2T10Q8NGZ9 312 aa11.83□□□□□ -0.52
CDH11-207ENST00000563255 LSM10Q969L4 123 aaKnown RBP11.83□□□□□ -0.52
CDH11-207ENST00000563255 SEC22AQ96IW7 307 aa11.83□□□□□ -0.52
CDH11-207ENST00000563255 MED28Q9H204 178 aa11.83□□□□□ -0.52
CDH11-207ENST00000563255 RAB18Q9NP72 206 aa11.83□□□□□ -0.52
CDH11-207ENST00000563255 TMED3Q9Y3Q3 217 aa11.83□□□□□ -0.52
CDH11-207ENST00000563255 SOX21Q9Y651 276 aaPredicted RBP11.83□□□□□ -0.52
CDH11-207ENST00000563255 A0A1B0GVG6 124 aa11.82□□□□□ -0.52
CDH11-207ENST00000563255 SHOXO15266 292 aa11.82□□□□□ -0.52
CDH11-207ENST00000563255 MOSP00540 346 aa11.82□□□□□ -0.52
CDH11-207ENST00000563255 IGKV1D-33P01593 117 aa11.82□□□□□ -0.52
CDH11-207ENST00000563255 IGKV1-33P01594 117 aa11.82□□□□□ -0.52
CDH11-207ENST00000563255 SNRNP70P08621 437 aaKnown RBP11.82□□□□□ -0.52
CDH11-207ENST00000563255 FAM106CPP0CH98 169 aa11.82□□□□□ -0.52
CDH11-207ENST00000563255 VDAC1P21796 283 aa11.82□□□□□ -0.52
CDH11-207ENST00000563255 SRP14P37108 136 aaKnown RBP11.82□□□□□ -0.52
CDH11-207ENST00000563255 RPS16P62249 146 aaKnown RBP11.82□□□□□ -0.52
CDH11-207ENST00000563255 LRRC75BQ2VPJ9 315 aa11.82□□□□□ -0.52
CDH11-207ENST00000563255 DEFB112Q30KQ8 113 aa11.82□□□□□ -0.52
CDH11-207ENST00000563255 LYZL2Q7Z4W2 148 aa11.82□□□□□ -0.52
CDH11-207ENST00000563255 UXS1Q8NBZ7 420 aa11.82□□□□□ -0.52
CDH11-207ENST00000563255 CHAC2Q8WUX2 184 aa11.82□□□□□ -0.52
CDH11-207ENST00000563255 R3HDM4Q96D70 268 aa11.82□□□□□ -0.52
CDH11-207ENST00000563255 EAF1Q96JC9 268 aaPredicted RBP11.82□□□□□ -0.52
CDH11-207ENST00000563255 SSX3Q99909 188 aa11.82□□□□□ -0.52
CDH11-207ENST00000563255 MARCH11A6NNE9 402 aa11.81□□□□□ -0.52
CDH11-207ENST00000563255 KRASP01116 189 aa11.81□□□□□ -0.52
CDH11-207ENST00000563255 IFNA21P01568 189 aa11.81□□□□□ -0.52
CDH11-207ENST00000563255 HOXB5P09067 269 aa11.81□□□□□ -0.52
CDH11-207ENST00000563255 SULT1A3P0DMM9 295 aa11.81□□□□□ -0.52
CDH11-207ENST00000563255 SULT1A4P0DMN0 295 aa11.81□□□□□ -0.52
CDH11-207ENST00000563255 Q6YL49 198 aa11.81□□□□□ -0.52
CDH11-207ENST00000563255 FAM219AQ8IW50 185 aa11.81□□□□□ -0.52
CDH11-207ENST00000563255 Q8N6K4 173 aa11.81□□□□□ -0.52
CDH11-207ENST00000563255 PIFOQ8TCI5 191 aa11.81□□□□□ -0.52
CDH11-207ENST00000563255 HARBI1Q96MB7 349 aa11.81□□□□□ -0.52
CDH11-207ENST00000563255 TSNAXQ99598 290 aaKnown RBP11.81□□□□□ -0.52
CDH11-207ENST00000563255 MMP24Q9Y5R2 645 aa11.81□□□□□ -0.52
CDH11-207ENST00000563255 HMX3A6NHT5 357 aa11.8□□□□□ -0.52
CDH11-207ENST00000563255 SRRM4A7MD48 611 aaKnown RBP11.8□□□□□ -0.52
CDH11-207ENST00000563255 ADAP1O75689 374 aa11.8□□□□□ -0.52
CDH11-207ENST00000563255 IGKV1-5P01602 117 aa11.8□□□□□ -0.52
CDH11-207ENST00000563255 IGLV2-23P01705 113 aa11.8□□□□□ -0.52
CDH11-207ENST00000563255 IL6RP08887 468 aaPredicted RBP11.8□□□□□ -0.52
CDH11-207ENST00000563255 P0C879 139 aa11.8□□□□□ -0.52
CDH11-207ENST00000563255 TRAPPC2P0DI81 140 aa11.8□□□□□ -0.52
CDH11-207ENST00000563255 TRAPPC2BP0DI82 140 aa11.8□□□□□ -0.52
CDH11-207ENST00000563255 SLC25A6P12236 298 aa11.8□□□□□ -0.52
CDH11-207ENST00000563255 G6PCP35575 357 aa11.8□□□□□ -0.52
CDH11-207ENST00000563255 BCAP31P51572 246 aa11.8□□□□□ -0.52
CDH11-207ENST00000563255 AKR1C2P52895 323 aa11.8□□□□□ -0.52
CDH11-207ENST00000563255 ERVK-16P61578 105 aa11.8□□□□□ -0.52
CDH11-207ENST00000563255 SCGB2A2Q13296 93 aa11.8□□□□□ -0.52
CDH11-207ENST00000563255 HES1Q14469 280 aa11.8□□□□□ -0.52
CDH11-207ENST00000563255 NMSQ5H8A3 153 aa11.8□□□□□ -0.52
CDH11-207ENST00000563255 GGNBP1Q5YKI7 109 aa11.8□□□□□ -0.52
CDH11-207ENST00000563255 DMBX1Q8NFW5 382 aa11.8□□□□□ -0.52
CDH11-207ENST00000563255 NPBQ8NG41 125 aa11.8□□□□□ -0.52
CDH11-207ENST00000563255 OR8H1Q8NGG4 311 aa11.8□□□□□ -0.52
CDH11-207ENST00000563255 VSTM2AQ8TAG5 236 aa11.8□□□□□ -0.52
CDH11-207ENST00000563255 C22orf15Q8WYQ4 148 aa11.8□□□□□ -0.52
CDH11-207ENST00000563255 RRNAD1Q96FB5 475 aaKnown RBP11.8□□□□□ -0.52
CDH11-207ENST00000563255 RITA1Q96K30 269 aa11.8□□□□□ -0.52
CDH11-207ENST00000563255 RHOVQ96L33 236 aa11.8□□□□□ -0.52
CDH11-207ENST00000563255 SVEP1Q4LDE5 3571 aa11.79□□□□□ -0.52
CDH11-207ENST00000563255 hCG_2014768A0A024R1R8 64 aa11.79□□□□□ -0.52
CDH11-207ENST00000563255 SPDEFO95238 335 aa11.79□□□□□ -0.52
CDH11-207ENST00000563255 TMEM11P17152 192 aa11.79□□□□□ -0.52
CDH11-207ENST00000563255 CD24P25063 80 aa11.79□□□□□ -0.52
CDH11-207ENST00000563255 IER3P46695 156 aa11.79□□□□□ -0.52
CDH11-207ENST00000563255 UBE2KP61086 200 aa11.79□□□□□ -0.52
CDH11-207ENST00000563255 FCN2Q15485 313 aa11.79□□□□□ -0.52
CDH11-207ENST00000563255 C2orf68Q2NKX9 166 aa11.79□□□□□ -0.52
CDH11-207ENST00000563255 VMA21Q3ZAQ7 101 aa11.79□□□□□ -0.52
CDH11-207ENST00000563255 H2BFWTQ7Z2G1 175 aa11.79□□□□□ -0.52
CDH11-207ENST00000563255 PUSL1Q8N0Z8 303 aaKnown RBP11.79□□□□□ -0.52
CDH11-207ENST00000563255 TEX45Q8NA69 505 aa11.79□□□□□ -0.52
CDH11-207ENST00000563255 OR5M8Q8NGP6 311 aa11.79□□□□□ -0.52
CDH11-207ENST00000563255 ZDHHC16Q969W1 377 aa11.79□□□□□ -0.52
CDH11-207ENST00000563255 GPR146Q96CH1 333 aa11.79□□□□□ -0.52
CDH11-207ENST00000563255 RBMXL1Q96E39 390 aaKnown RBP11.79□□□□□ -0.52
CDH11-207ENST00000563255 ZNF48Q96MX3 618 aaPredicted RBP11.79□□□□□ -0.52
CDH11-207ENST00000563255 BET1LQ9NYM9 111 aa11.79□□□□□ -0.52
CDH11-207ENST00000563255 MGAT4CQ9UBM8 478 aa11.79□□□□□ -0.52
CDH11-207ENST00000563255 A0A1B0GU03 582 aa11.78□□□□□ -0.52
CDH11-207ENST00000563255 MDFIC2A0A1B0GVS7 189 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms