RNA–Protein interactions for RNA: ENST00000563240.1

LPCAT4-204, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 939 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-204ENST00000563240 GP9P14770 177 aa11.71□□□□□ -0.53
LPCAT4-204ENST00000563240 LSM3P62310 102 aaKnown RBP11.71□□□□□ -0.53
LPCAT4-204ENST00000563240 BEST4Q8NFU0 473 aa11.71□□□□□ -0.53
LPCAT4-204ENST00000563240 OR6Q1Q8NGQ2 317 aa11.71□□□□□ -0.53
LPCAT4-204ENST00000563240 TCTEX1D2Q8WW35 142 aa11.71□□□□□ -0.53
LPCAT4-204ENST00000563240 ELOVL1Q9BW60 279 aa11.71□□□□□ -0.53
LPCAT4-204ENST00000563240 TINAGL1Q9GZM7 467 aaPredicted RBP11.71□□□□□ -0.53
LPCAT4-204ENST00000563240 ZNF430Q9H8G1 570 aaPredicted RBP11.71□□□□□ -0.53
LPCAT4-204ENST00000563240 DIABLOQ9NR28 239 aa11.71□□□□□ -0.53
LPCAT4-204ENST00000563240 CCL28Q9NRJ3 127 aa11.71□□□□□ -0.53
LPCAT4-204ENST00000563240 MRPS7Q9Y2R9 242 aaKnown RBP11.71□□□□□ -0.53
LPCAT4-204ENST00000563240 SMAD5-AS1Q9Y6J3 95 aa11.71□□□□□ -0.53
LPCAT4-204ENST00000563240 TNFSF12O43508 249 aa11.7□□□□□ -0.54
LPCAT4-204ENST00000563240 RBMXL2O75526 392 aaKnown RBP11.7□□□□□ -0.54
LPCAT4-204ENST00000563240 TRBV12-3P01733 135 aa11.7□□□□□ -0.54
LPCAT4-204ENST00000563240 OR9G9P0C7N8 305 aa11.7□□□□□ -0.54
LPCAT4-204ENST00000563240 NHLRC4P0CG21 123 aaPredicted RBP11.7□□□□□ -0.54
LPCAT4-204ENST00000563240 ZP3P21754 424 aa11.7□□□□□ -0.54
LPCAT4-204ENST00000563240 AADACP22760 399 aa11.7□□□□□ -0.54
LPCAT4-204ENST00000563240 FCGR2CP31995 323 aa11.7□□□□□ -0.54
LPCAT4-204ENST00000563240 SCAND1P57086 179 aa11.7□□□□□ -0.54
LPCAT4-204ENST00000563240 CDK10Q15131 360 aa11.7□□□□□ -0.54
LPCAT4-204ENST00000563240 OVCH2Q7RTZ1 564 aa11.7□□□□□ -0.54
LPCAT4-204ENST00000563240 MFSD4AQ8N468 514 aa11.7□□□□□ -0.54
LPCAT4-204ENST00000563240 SECTM1Q8WVN6 248 aa11.7□□□□□ -0.54
LPCAT4-204ENST00000563240 WWC2-AS2Q96NR7 200 aa11.7□□□□□ -0.54
LPCAT4-204ENST00000563240 AUNIPQ9H7T9 357 aa11.7□□□□□ -0.54
LPCAT4-204ENST00000563240 ADAM30Q9UKF2 790 aa11.7□□□□□ -0.54
LPCAT4-204ENST00000563240 U3KQK5 164 aa11.7□□□□□ -0.54
LPCAT4-204ENST00000563240 AIREO43918 545 aa11.69□□□□□ -0.54
LPCAT4-204ENST00000563240 SLC22A5O76082 557 aa11.69□□□□□ -0.54
LPCAT4-204ENST00000563240 SYNJ2BPP57105 145 aa11.69□□□□□ -0.54
LPCAT4-204ENST00000563240 DYRK1AQ13627 763 aa11.69□□□□□ -0.54
LPCAT4-204ENST00000563240 SSX9Q7RTT3 188 aa11.69□□□□□ -0.54
LPCAT4-204ENST00000563240 HOGA1Q86XE5 327 aa11.69□□□□□ -0.54
LPCAT4-204ENST00000563240 ANKRD13BQ86YJ7 626 aa11.69□□□□□ -0.54
LPCAT4-204ENST00000563240 ADAD2Q8NCV1 583 aaKnown RBP11.69□□□□□ -0.54
LPCAT4-204ENST00000563240 OR13F1Q8NGS4 319 aa11.69□□□□□ -0.54
LPCAT4-204ENST00000563240 HSD17B10Q99714 261 aaKnown RBP11.69□□□□□ -0.54
LPCAT4-204ENST00000563240 PEF1Q9UBV8 284 aaKnown RBP11.69□□□□□ -0.54
LPCAT4-204ENST00000563240 HMX3A6NHT5 357 aa11.68□□□□□ -0.54
LPCAT4-204ENST00000563240 TRIM64CA6NLI5 447 aa11.68□□□□□ -0.54
LPCAT4-204ENST00000563240 RPS19P39019 145 aaKnown RBP11.68□□□□□ -0.54
LPCAT4-204ENST00000563240 BRWD1-AS2P59051 145 aa11.68□□□□□ -0.54
LPCAT4-204ENST00000563240 FXYD4P59646 89 aa11.68□□□□□ -0.54
LPCAT4-204ENST00000563240 RHOGP84095 191 aa11.68□□□□□ -0.54
LPCAT4-204ENST00000563240 KLF5Q13887 457 aaPredicted RBP11.68□□□□□ -0.54
LPCAT4-204ENST00000563240 ZNF343Q6P1L6 599 aa11.68□□□□□ -0.54
LPCAT4-204ENST00000563240 MMD2Q8IY49 270 aa11.68□□□□□ -0.54
LPCAT4-204ENST00000563240 TSPAN14Q8NG11 270 aa11.68□□□□□ -0.54
LPCAT4-204ENST00000563240 OR4S2Q8NH73 311 aa11.68□□□□□ -0.54
LPCAT4-204ENST00000563240 USMG5Q96IX5 58 aa11.68□□□□□ -0.54
LPCAT4-204ENST00000563240 FYTTD1Q96QD9 318 aaKnown RBP11.68□□□□□ -0.54
LPCAT4-204ENST00000563240 A0A0A6YYH2 397 aa11.67□□□□□ -0.54
LPCAT4-204ENST00000563240 A6NJ64 397 aa11.67□□□□□ -0.54
LPCAT4-204ENST00000563240 CREBL2O60519 120 aaPredicted RBP11.67□□□□□ -0.54
LPCAT4-204ENST00000563240 PPYP01298 95 aa11.67□□□□□ -0.54
LPCAT4-204ENST00000563240 ATP5G2Q06055 141 aa11.67□□□□□ -0.54
LPCAT4-204ENST00000563240 EIF4EBP1Q13541 118 aaPredicted RBP11.67□□□□□ -0.54
LPCAT4-204ENST00000563240 TIMM50Q3ZCQ8 353 aa11.67□□□□□ -0.54
LPCAT4-204ENST00000563240 YIPF6Q96EC8 236 aa11.67□□□□□ -0.54
LPCAT4-204ENST00000563240 S100A16Q96FQ6 103 aaKnown RBP11.67□□□□□ -0.54
LPCAT4-204ENST00000563240 SPIN2AQ99865 258 aa11.67□□□□□ -0.54
LPCAT4-204ENST00000563240 SPIN2BQ9BPZ2 258 aa11.67□□□□□ -0.54
LPCAT4-204ENST00000563240 SLC5A7Q9GZV3 580 aa11.67□□□□□ -0.54
LPCAT4-204ENST00000563240 VCX3AQ9NNX9 186 aa11.67□□□□□ -0.54
LPCAT4-204ENST00000563240 AKIP1Q9NQ31 210 aa11.67□□□□□ -0.54
LPCAT4-204ENST00000563240 A0A087WXM4 84 aa11.66□□□□□ -0.54
LPCAT4-204ENST00000563240 SULT1C2O00338 296 aa11.66□□□□□ -0.54
LPCAT4-204ENST00000563240 OR2A4O95047 310 aa11.66□□□□□ -0.54
LPCAT4-204ENST00000563240 BRI3O95415 125 aa11.66□□□□□ -0.54
LPCAT4-204ENST00000563240 MYOD1P15172 320 aa11.66□□□□□ -0.54
LPCAT4-204ENST00000563240 ZNF45Q02386 682 aa11.66□□□□□ -0.54
LPCAT4-204ENST00000563240 RPEL1Q2QD12 228 aa11.66□□□□□ -0.54
LPCAT4-204ENST00000563240 ZNF66Q6ZN08 573 aa11.66□□□□□ -0.54
LPCAT4-204ENST00000563240 C19orf35Q6ZS72 473 aa11.66□□□□□ -0.54
LPCAT4-204ENST00000563240 SBSPONQ8IVN8 264 aa11.66□□□□□ -0.54
LPCAT4-204ENST00000563240 SAMD12Q8N8I0 201 aa11.66□□□□□ -0.54
LPCAT4-204ENST00000563240 OR9G4Q8NGQ1 327 aa11.66□□□□□ -0.54
LPCAT4-204ENST00000563240 SNAPC3Q92966 411 aa11.66□□□□□ -0.54
LPCAT4-204ENST00000563240 OR2A7Q96R45 310 aa11.66□□□□□ -0.54
LPCAT4-204ENST00000563240 COL7A1Q02388 2944 aa11.66□□□□□ -0.54
LPCAT4-204ENST00000563240 SORL1Q92673 2214 aa11.66□□□□□ -0.54
LPCAT4-204ENST00000563240 DNAH9Q9NYC9 4486 aa11.65□□□□□ -0.54
LPCAT4-204ENST00000563240 DPPA5A6NC42 116 aa11.65□□□□□ -0.54
LPCAT4-204ENST00000563240 E7EUB6 86 aa11.65□□□□□ -0.54
LPCAT4-204ENST00000563240 XRCC3O43542 346 aa11.65□□□□□ -0.54
LPCAT4-204ENST00000563240 OR2J3O76001 311 aa11.65□□□□□ -0.54
LPCAT4-204ENST00000563240 KBTBD11O94819 623 aa11.65□□□□□ -0.54
LPCAT4-204ENST00000563240 IGLV1-51P01701 117 aa11.65□□□□□ -0.54
LPCAT4-204ENST00000563240 FRMD6-AS1P0C7T7 363 aa11.65□□□□□ -0.54
LPCAT4-204ENST00000563240 EXOSC2Q13868 293 aaKnown RBP11.65□□□□□ -0.54
LPCAT4-204ENST00000563240 TATDN3Q17R31 274 aa11.65□□□□□ -0.54
LPCAT4-204ENST00000563240 TMEM17Q86X19 198 aa11.65□□□□□ -0.54
LPCAT4-204ENST00000563240 CROCCP3Q8IVE0 287 aa11.65□□□□□ -0.54
LPCAT4-204ENST00000563240 SPAG16Q8N0X2 631 aa11.65□□□□□ -0.54
LPCAT4-204ENST00000563240 TTC9CQ8N5M4 171 aa11.65□□□□□ -0.54
LPCAT4-204ENST00000563240 VSTM2AQ8TAG5 236 aa11.65□□□□□ -0.54
LPCAT4-204ENST00000563240 IFT46Q9NQC8 304 aa11.65□□□□□ -0.54
LPCAT4-204ENST00000563240 FAM223BA6NKX1 122 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms