RNA–Protein interactions for RNA: ENST00000562874.2

SF3B3-203, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-203ENST00000562874 RANGRFQ9HD47 186 aaPredicted RBP12.05□□□□□ -0.48
SF3B3-203ENST00000562874 SPATA2Q9UM82 520 aa12.05□□□□□ -0.48
SF3B3-203ENST00000562874 RBMX2Q9Y388 322 aaKnown RBP12.05□□□□□ -0.48
SF3B3-203ENST00000562874 HLA-DQB1P01920 261 aa12.04□□□□□ -0.48
SF3B3-203ENST00000562874 OR9G9P0C7N8 305 aa12.04□□□□□ -0.48
SF3B3-203ENST00000562874 FRMD6-AS1P0C7T7 363 aa12.04□□□□□ -0.48
SF3B3-203ENST00000562874 ZP3P21754 424 aa12.04□□□□□ -0.48
SF3B3-203ENST00000562874 SYNJ2BPP57105 145 aa12.04□□□□□ -0.48
SF3B3-203ENST00000562874 CDK10Q15131 360 aa12.04□□□□□ -0.48
SF3B3-203ENST00000562874 CNIH2Q6PI25 160 aa12.04□□□□□ -0.48
SF3B3-203ENST00000562874 C19orf35Q6ZS72 473 aa12.04□□□□□ -0.48
SF3B3-203ENST00000562874 GVQW1Q8N7I0 195 aa12.04□□□□□ -0.48
SF3B3-203ENST00000562874 TEX45Q8NA69 505 aa12.04□□□□□ -0.48
SF3B3-203ENST00000562874 TCTEX1D2Q8WW35 142 aa12.04□□□□□ -0.48
SF3B3-203ENST00000562874 TAS2R8Q9NYW2 309 aa12.04□□□□□ -0.48
SF3B3-203ENST00000562874 ANXA10Q9UJ72 324 aa12.04□□□□□ -0.48
SF3B3-203ENST00000562874 TRAV18A0A075B6X5 111 aa12.03□□□□□ -0.48
SF3B3-203ENST00000562874 A0A0G2JLM5 398 aa12.03□□□□□ -0.48
SF3B3-203ENST00000562874 TNFSF12O43508 249 aa12.03□□□□□ -0.48
SF3B3-203ENST00000562874 SCGNO76038 276 aa12.03□□□□□ -0.48
SF3B3-203ENST00000562874 ZNF45Q02386 682 aa12.03□□□□□ -0.48
SF3B3-203ENST00000562874 ANKRD13BQ86YJ7 626 aa12.03□□□□□ -0.48
SF3B3-203ENST00000562874 ELOVL1Q9BW60 279 aa12.03□□□□□ -0.48
SF3B3-203ENST00000562874 YTHDF1Q9BYJ9 559 aaKnown RBP12.03□□□□□ -0.48
SF3B3-203ENST00000562874 DCSTAMPQ9H295 470 aa12.03□□□□□ -0.48
SF3B3-203ENST00000562874 MRPS7Q9Y2R9 242 aaKnown RBP12.03□□□□□ -0.48
SF3B3-203ENST00000562874 MEIS3P1A6NDR6 274 aa12.02□□□□□ -0.49
SF3B3-203ENST00000562874 HMX3A6NHT5 357 aa12.02□□□□□ -0.49
SF3B3-203ENST00000562874 IGLV1-51P01701 117 aa12.02□□□□□ -0.49
SF3B3-203ENST00000562874 CTXN2P0C2S0 81 aa12.02□□□□□ -0.49
SF3B3-203ENST00000562874 ARPC4P59998 168 aa12.02□□□□□ -0.49
SF3B3-203ENST00000562874 RHOGP84095 191 aa12.02□□□□□ -0.49
SF3B3-203ENST00000562874 EXOSC2Q13868 293 aaKnown RBP12.02□□□□□ -0.49
SF3B3-203ENST00000562874 ZNF343Q6P1L6 599 aa12.02□□□□□ -0.49
SF3B3-203ENST00000562874 BEST4Q8NFU0 473 aa12.02□□□□□ -0.49
SF3B3-203ENST00000562874 OR9G4Q8NGQ1 327 aa12.02□□□□□ -0.49
SF3B3-203ENST00000562874 SECTM1Q8WVN6 248 aa12.02□□□□□ -0.49
SF3B3-203ENST00000562874 TMEM68Q96MH6 324 aa12.02□□□□□ -0.49
SF3B3-203ENST00000562874 RCHY1Q96PM5 261 aa12.02□□□□□ -0.49
SF3B3-203ENST00000562874 AKIP1Q9NQ31 210 aa12.02□□□□□ -0.49
SF3B3-203ENST00000562874 PEF1Q9UBV8 284 aaKnown RBP12.02□□□□□ -0.49
SF3B3-203ENST00000562874 PRELID3BQ9Y3B1 194 aa12.02□□□□□ -0.49
SF3B3-203ENST00000562874 ETV7Q9Y603 341 aa12.02□□□□□ -0.49
SF3B3-203ENST00000562874 ACTL6BO94805 426 aa12.01□□□□□ -0.49
SF3B3-203ENST00000562874 MYOD1P15172 320 aa12.01□□□□□ -0.49
SF3B3-203ENST00000562874 AADACP22760 399 aa12.01□□□□□ -0.49
SF3B3-203ENST00000562874 EIF4EBP1Q13541 118 aaPredicted RBP12.01□□□□□ -0.49
SF3B3-203ENST00000562874 KLF5Q13887 457 aaPredicted RBP12.01□□□□□ -0.49
SF3B3-203ENST00000562874 RPEL1Q2QD12 228 aa12.01□□□□□ -0.49
SF3B3-203ENST00000562874 SSX9Q7RTT3 188 aa12.01□□□□□ -0.49
SF3B3-203ENST00000562874 MMD2Q8IY49 270 aa12.01□□□□□ -0.49
SF3B3-203ENST00000562874 OR13F1Q8NGS4 319 aa12.01□□□□□ -0.49
SF3B3-203ENST00000562874 OR4S2Q8NH73 311 aa12.01□□□□□ -0.49
SF3B3-203ENST00000562874 CCL28Q9NRJ3 127 aa12.01□□□□□ -0.49
SF3B3-203ENST00000562874 CREBL2O60519 120 aaPredicted RBP12□□□□□ -0.49
SF3B3-203ENST00000562874 OR2J3O76001 311 aa12□□□□□ -0.49
SF3B3-203ENST00000562874 KBTBD11O94819 623 aa12□□□□□ -0.49
SF3B3-203ENST00000562874 FCGR2CP31995 323 aa12□□□□□ -0.49
SF3B3-203ENST00000562874 BRWD1-AS2P59051 145 aa12□□□□□ -0.49
SF3B3-203ENST00000562874 FXYD4P59646 89 aa12□□□□□ -0.49
SF3B3-203ENST00000562874 KCTD21Q4G0X4 260 aa12□□□□□ -0.49
SF3B3-203ENST00000562874 IL34Q6ZMJ4 242 aa12□□□□□ -0.49
SF3B3-203ENST00000562874 FYTTD1Q96QD9 318 aaKnown RBP12□□□□□ -0.49
SF3B3-203ENST00000562874 HSD17B10Q99714 261 aaKnown RBP12□□□□□ -0.49
SF3B3-203ENST00000562874 TENM3Q9P273 2699 aa12□□□□□ -0.49
SF3B3-203ENST00000562874 E7EUB6 86 aa11.99□□□□□ -0.49
SF3B3-203ENST00000562874 BMPR1BO00238 502 aa11.99□□□□□ -0.49
SF3B3-203ENST00000562874 BRI3O95415 125 aa11.99□□□□□ -0.49
SF3B3-203ENST00000562874 IGHV4-30-4P0DP06 118 aa11.99□□□□□ -0.49
SF3B3-203ENST00000562874 EDN2P20800 178 aa11.99□□□□□ -0.49
SF3B3-203ENST00000562874 LSM3P62310 102 aaKnown RBP11.99□□□□□ -0.49
SF3B3-203ENST00000562874 MFSD4AQ8N468 514 aa11.99□□□□□ -0.49
SF3B3-203ENST00000562874 SNAPC3Q92966 411 aa11.99□□□□□ -0.49
SF3B3-203ENST00000562874 USMG5Q96IX5 58 aa11.99□□□□□ -0.49
SF3B3-203ENST00000562874 SPIN2AQ99865 258 aa11.99□□□□□ -0.49
SF3B3-203ENST00000562874 SPIN2BQ9BPZ2 258 aa11.99□□□□□ -0.49
SF3B3-203ENST00000562874 S4R3C0 116 aa11.99□□□□□ -0.49
SF3B3-203ENST00000562874 RYR3Q15413 4870 aa11.99□□□□□ -0.49
SF3B3-203ENST00000562874 STAB2Q8WWQ8 2551 aa11.98□□□□□ -0.49
SF3B3-203ENST00000562874 A0A1B0GW64 132 aa11.98□□□□□ -0.49
SF3B3-203ENST00000562874 IZUMO1RA6ND01 250 aa11.98□□□□□ -0.49
SF3B3-203ENST00000562874 FAM223BA6NKX1 122 aa11.98□□□□□ -0.49
SF3B3-203ENST00000562874 TEX22C9J3V5 150 aa11.98□□□□□ -0.49
SF3B3-203ENST00000562874 PPP5D1E7EU14 171 aa11.98□□□□□ -0.49
SF3B3-203ENST00000562874 SLC22A5O76082 557 aa11.98□□□□□ -0.49
SF3B3-203ENST00000562874 OR2A4O95047 310 aa11.98□□□□□ -0.49
SF3B3-203ENST00000562874 PPYP01298 95 aa11.98□□□□□ -0.49
SF3B3-203ENST00000562874 IGHV3-23P01764 117 aa11.98□□□□□ -0.49
SF3B3-203ENST00000562874 CSN3P07498 182 aa11.98□□□□□ -0.49
SF3B3-203ENST00000562874 RPL27AP46776 148 aaKnown RBP11.98□□□□□ -0.49
SF3B3-203ENST00000562874 SCAND1P57086 179 aa11.98□□□□□ -0.49
SF3B3-203ENST00000562874 TMEM17Q86X19 198 aa11.98□□□□□ -0.49
SF3B3-203ENST00000562874 HOGA1Q86XE5 327 aa11.98□□□□□ -0.49
SF3B3-203ENST00000562874 FAM223AQ8IWN6 122 aa11.98□□□□□ -0.49
SF3B3-203ENST00000562874 PUSL1Q8N0Z8 303 aaKnown RBP11.98□□□□□ -0.49
SF3B3-203ENST00000562874 Q8N1Y9 231 aa11.98□□□□□ -0.49
SF3B3-203ENST00000562874 OR2A7Q96R45 310 aa11.98□□□□□ -0.49
SF3B3-203ENST00000562874 AUNIPQ9H7T9 357 aa11.98□□□□□ -0.49
SF3B3-203ENST00000562874 REG1AP05451 166 aa11.97□□□□□ -0.49
SF3B3-203ENST00000562874 AREGP15514 252 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms