RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 OR10G8Q8NGN5 311 aa11.82□□□□□ -0.52
GTF3C1-203ENST00000562609 HES7Q9BYE0 225 aa11.82□□□□□ -0.52
GTF3C1-203ENST00000562609 CACNG5Q9UF02 275 aa11.82□□□□□ -0.52
GTF3C1-203ENST00000562609 IGKV1-27A0A075B6S5 117 aa11.81□□□□□ -0.52
GTF3C1-203ENST00000562609 CDC34P49427 236 aaPredicted RBP11.81□□□□□ -0.52
GTF3C1-203ENST00000562609 ZNF83P51522 516 aa11.81□□□□□ -0.52
GTF3C1-203ENST00000562609 SLC38A11Q08AI6 406 aa11.81□□□□□ -0.52
GTF3C1-203ENST00000562609 MALLQ13021 153 aa11.81□□□□□ -0.52
GTF3C1-203ENST00000562609 FAM19A2Q8N3H0 131 aa11.81□□□□□ -0.52
GTF3C1-203ENST00000562609 OR52L2PQ8NGH6 319 aa11.81□□□□□ -0.52
GTF3C1-203ENST00000562609 KCNS1Q96KK3 526 aa11.81□□□□□ -0.52
GTF3C1-203ENST00000562609 STRADBQ9C0K7 418 aa11.81□□□□□ -0.52
GTF3C1-203ENST00000562609 OTOGLQ3ZCN5 2332 aa11.81□□□□□ -0.52
GTF3C1-203ENST00000562609 SLC22A20A6NK97 555 aa11.81□□□□□ -0.52
GTF3C1-203ENST00000562609 CORTO00230 105 aa11.81□□□□□ -0.52
GTF3C1-203ENST00000562609 SLC17A3O00476 420 aa11.81□□□□□ -0.52
GTF3C1-203ENST00000562609 TOX4O94842 621 aa11.81□□□□□ -0.52
GTF3C1-203ENST00000562609 IGLV3-1P01715 115 aa11.81□□□□□ -0.52
GTF3C1-203ENST00000562609 ARG2P78540 354 aa11.81□□□□□ -0.52
GTF3C1-203ENST00000562609 RNPS1Q15287 305 aaKnown RBP11.81□□□□□ -0.52
GTF3C1-203ENST00000562609 HIST3H3Q16695 136 aa11.81□□□□□ -0.52
GTF3C1-203ENST00000562609 ASCL4Q6XD76 172 aa11.81□□□□□ -0.52
GTF3C1-203ENST00000562609 TRBV20OR9-2A0A075B6H5 130 aa11.8□□□□□ -0.52
GTF3C1-203ENST00000562609 H0Y980 276 aa11.8□□□□□ -0.52
GTF3C1-203ENST00000562609 S1PR2O95136 353 aa11.8□□□□□ -0.52
GTF3C1-203ENST00000562609 PATE4P0C8F1 98 aa11.8□□□□□ -0.52
GTF3C1-203ENST00000562609 TIMP3P35625 211 aa11.8□□□□□ -0.52
GTF3C1-203ENST00000562609 RELBQ01201 579 aa11.8□□□□□ -0.52
GTF3C1-203ENST00000562609 KIAA1644Q3SXP7 199 aa11.8□□□□□ -0.52
GTF3C1-203ENST00000562609 MPV17L2Q567V2 206 aa11.8□□□□□ -0.52
GTF3C1-203ENST00000562609 BATF2Q8N1L9 274 aa11.8□□□□□ -0.52
GTF3C1-203ENST00000562609 OSR2Q8N2R0 312 aa11.8□□□□□ -0.52
GTF3C1-203ENST00000562609 OR51H1Q8NH63 302 aa11.8□□□□□ -0.52
GTF3C1-203ENST00000562609 CXCL13O43927 109 aa11.8□□□□□ -0.52
GTF3C1-203ENST00000562609 CA2P00918 260 aa11.8□□□□□ -0.52
GTF3C1-203ENST00000562609 SERPINE2P07093 398 aa11.8□□□□□ -0.52
GTF3C1-203ENST00000562609 NTF3P20783 257 aa11.8□□□□□ -0.52
GTF3C1-203ENST00000562609 ARR3P36575 388 aa11.8□□□□□ -0.52
GTF3C1-203ENST00000562609 OR8B8Q15620 311 aa11.8□□□□□ -0.52
GTF3C1-203ENST00000562609 SMIM21Q3B7S5 101 aa11.8□□□□□ -0.52
GTF3C1-203ENST00000562609 TMEM211Q6ICI0 200 aa11.8□□□□□ -0.52
GTF3C1-203ENST00000562609 TP73-AS1Q9UF72 201 aa11.8□□□□□ -0.52
GTF3C1-203ENST00000562609 ERRFI1Q9UJM3 462 aaPredicted RBP11.8□□□□□ -0.52
GTF3C1-203ENST00000562609 SPTBN2O15020 2390 aa11.8□□□□□ -0.52
GTF3C1-203ENST00000562609 IGKV1-12A0A0C4DH73 117 aa11.79□□□□□ -0.52
GTF3C1-203ENST00000562609 NDUFS8O00217 210 aa11.79□□□□□ -0.52
GTF3C1-203ENST00000562609 ZNHIT1O43257 154 aa11.79□□□□□ -0.52
GTF3C1-203ENST00000562609 TLX3O43711 291 aaPredicted RBP11.79□□□□□ -0.52
GTF3C1-203ENST00000562609 PDE6DO43924 150 aa11.79□□□□□ -0.52
GTF3C1-203ENST00000562609 PDCD6O75340 191 aa11.79□□□□□ -0.52
GTF3C1-203ENST00000562609 ZNF324O75467 553 aaPredicted RBP11.79□□□□□ -0.52
GTF3C1-203ENST00000562609 IGKV1D-12P01611 117 aa11.79□□□□□ -0.52
GTF3C1-203ENST00000562609 IGHV3-9P01782 118 aa11.79□□□□□ -0.52
GTF3C1-203ENST00000562609 GUCA1AP43080 201 aaPredicted RBP11.79□□□□□ -0.52
GTF3C1-203ENST00000562609 CYB561P49447 251 aa11.79□□□□□ -0.52
GTF3C1-203ENST00000562609 LINC00696Q6ZRV3 163 aa11.79□□□□□ -0.52
GTF3C1-203ENST00000562609 BORCS7Q96B45 105 aa11.79□□□□□ -0.52
GTF3C1-203ENST00000562609 SGCZQ96LD1 299 aa11.79□□□□□ -0.52
GTF3C1-203ENST00000562609 TIMM9Q9Y5J7 89 aa11.79□□□□□ -0.52
GTF3C1-203ENST00000562609 MAP1BP46821 2468 aaKnown RBP11.79□□□□□ -0.52
GTF3C1-203ENST00000562609 CD300LBA8K4G0 201 aa11.79□□□□□ -0.52
GTF3C1-203ENST00000562609 PGLYRP1O75594 196 aaPredicted RBP11.79□□□□□ -0.52
GTF3C1-203ENST00000562609 OR7C1O76099 320 aaPredicted RBP11.79□□□□□ -0.52
GTF3C1-203ENST00000562609 VAMP5O95183 116 aa11.79□□□□□ -0.52
GTF3C1-203ENST00000562609 SCTP09683 121 aa11.79□□□□□ -0.52
GTF3C1-203ENST00000562609 GDF1P27539 372 aa11.79□□□□□ -0.52
GTF3C1-203ENST00000562609 B3GALT5-AS1P59052 145 aa11.79□□□□□ -0.52
GTF3C1-203ENST00000562609 SRYQ05066 204 aa11.79□□□□□ -0.52
GTF3C1-203ENST00000562609 CLEC7AQ9BXN2 247 aa11.79□□□□□ -0.52
GTF3C1-203ENST00000562609 IL36BQ9NZH7 164 aa11.79□□□□□ -0.52
GTF3C1-203ENST00000562609 C17orf112F2Z3M2 114 aa11.78□□□□□ -0.52
GTF3C1-203ENST00000562609 CELA3AP09093 270 aa11.78□□□□□ -0.52
GTF3C1-203ENST00000562609 PSG2P11465 335 aa11.78□□□□□ -0.52
GTF3C1-203ENST00000562609 IGLL1P15814 213 aa11.78□□□□□ -0.52
GTF3C1-203ENST00000562609 FAM58AQ8N1B3 248 aa11.78□□□□□ -0.52
GTF3C1-203ENST00000562609 APOBEC3DQ96AK3 386 aaPredicted RBP11.78□□□□□ -0.52
GTF3C1-203ENST00000562609 SARAFQ96BY9 339 aa11.78□□□□□ -0.52
GTF3C1-203ENST00000562609 GMPPAQ96IJ6 420 aaPredicted RBP11.78□□□□□ -0.52
GTF3C1-203ENST00000562609 ULBP2Q9BZM5 246 aa11.78□□□□□ -0.52
GTF3C1-203ENST00000562609 WASHC3Q9Y3C0 194 aa11.78□□□□□ -0.52
GTF3C1-203ENST00000562609 KIAA1549Q9HCM3 1950 aa11.78□□□□□ -0.52
GTF3C1-203ENST00000562609 J3QW42 95 aa11.78□□□□□ -0.52
GTF3C1-203ENST00000562609 GOSR1O95249 250 aa11.78□□□□□ -0.52
GTF3C1-203ENST00000562609 F2RP25116 425 aa11.78□□□□□ -0.52
GTF3C1-203ENST00000562609 CLDN15P56746 228 aa11.78□□□□□ -0.52
GTF3C1-203ENST00000562609 PMCHL1Q16048 86 aa11.78□□□□□ -0.52
GTF3C1-203ENST00000562609 VASH2Q86V25 355 aa11.78□□□□□ -0.52
GTF3C1-203ENST00000562609 OCC1Q8TAD7 63 aa11.78□□□□□ -0.52
GTF3C1-203ENST00000562609 NAT8BQ9UHF3 227 aa11.78□□□□□ -0.52
GTF3C1-203ENST00000562609 ZFHX2Q9C0A1 2572 aaPredicted RBP11.78□□□□□ -0.52
GTF3C1-203ENST00000562609 TRAV9-2A0A087WT02 112 aa11.78□□□□□ -0.52
GTF3C1-203ENST00000562609 SPINK4O60575 86 aa11.78□□□□□ -0.52
GTF3C1-203ENST00000562609 COX5AP20674 150 aa11.78□□□□□ -0.52
GTF3C1-203ENST00000562609 PLA2G2CQ5R387 149 aa11.78□□□□□ -0.52
GTF3C1-203ENST00000562609 ATP1A1-AS1Q5TC04 95 aa11.78□□□□□ -0.52
GTF3C1-203ENST00000562609 PLEK2Q9NYT0 353 aa11.78□□□□□ -0.52
GTF3C1-203ENST00000562609 IL36GQ9NZH8 169 aa11.78□□□□□ -0.52
GTF3C1-203ENST00000562609 DHHO43323 396 aa11.77□□□□□ -0.53
GTF3C1-203ENST00000562609 ZNF883P0CG24 379 aa11.77□□□□□ -0.53
GTF3C1-203ENST00000562609 MSR1P21757 451 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms