RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 PPP1R27Q86WC6 154 aa12.96□□□□□ -0.33
USB1-206ENST00000562534 CCDC71LQ8N9Z2 235 aa12.96□□□□□ -0.33
USB1-206ENST00000562534 OR13C8Q8NGS7 320 aa12.96□□□□□ -0.33
USB1-206ENST00000562534 C7orf50Q9BRJ6 194 aaKnown RBP12.96□□□□□ -0.33
USB1-206ENST00000562534 PLEKHA2Q9HB19 425 aa12.96□□□□□ -0.33
USB1-206ENST00000562534 COPZ2Q9P299 210 aa12.96□□□□□ -0.33
USB1-206ENST00000562534 SLC25A17O43808 307 aa12.95□□□□□ -0.34
USB1-206ENST00000562534 CRYGBP07316 175 aa12.95□□□□□ -0.34
USB1-206ENST00000562534 UBE2KP61086 200 aa12.95□□□□□ -0.34
USB1-206ENST00000562534 ZNF562Q6V9R5 426 aa12.95□□□□□ -0.34
USB1-206ENST00000562534 CENPVQ7Z7K6 275 aaPredicted RBP12.95□□□□□ -0.34
USB1-206ENST00000562534 VSTM2AQ8TAG5 236 aa12.95□□□□□ -0.34
USB1-206ENST00000562534 MRGPRFQ96AM1 343 aa12.95□□□□□ -0.34
USB1-206ENST00000562534 SLC25A21Q9BQT8 299 aaPredicted RBP12.95□□□□□ -0.34
USB1-206ENST00000562534 ZNF747Q9BV97 191 aa12.95□□□□□ -0.34
USB1-206ENST00000562534 GON7Q9BXV9 100 aa12.95□□□□□ -0.34
USB1-206ENST00000562534 WNT10AQ9GZT5 417 aa12.95□□□□□ -0.34
USB1-206ENST00000562534 AP4M1O00189 453 aa12.94□□□□□ -0.34
USB1-206ENST00000562534 FCN1O00602 326 aa12.94□□□□□ -0.34
USB1-206ENST00000562534 RAMP3O60896 148 aa12.94□□□□□ -0.34
USB1-206ENST00000562534 B3GALNT1O75752 331 aa12.94□□□□□ -0.34
USB1-206ENST00000562534 VSIG10L2P0DP72 767 aa12.94□□□□□ -0.34
USB1-206ENST00000562534 PI3P19957 117 aa12.94□□□□□ -0.34
USB1-206ENST00000562534 TAS2R31P59538 309 aa12.94□□□□□ -0.34
USB1-206ENST00000562534 CHPT1Q8WUD6 406 aa12.94□□□□□ -0.34
USB1-206ENST00000562534 RHOVQ96L33 236 aa12.94□□□□□ -0.34
USB1-206ENST00000562534 RTBDNQ9BSG5 229 aaPredicted RBP12.94□□□□□ -0.34
USB1-206ENST00000562534 COL6A5A8TX70 2615 aa12.94□□□□□ -0.34
USB1-206ENST00000562534 LINC01548A6NM66 108 aa12.93□□□□□ -0.34
USB1-206ENST00000562534 CREBL2O60519 120 aaPredicted RBP12.93□□□□□ -0.34
USB1-206ENST00000562534 OR2A4O95047 310 aa12.93□□□□□ -0.34
USB1-206ENST00000562534 IGF1P05019 195 aa12.93□□□□□ -0.34
USB1-206ENST00000562534 NQO2P16083 231 aa12.93□□□□□ -0.34
USB1-206ENST00000562534 LPAR6P43657 344 aa12.93□□□□□ -0.34
USB1-206ENST00000562534 CX3CL1P78423 397 aa12.93□□□□□ -0.34
USB1-206ENST00000562534 OR2A7Q96R45 310 aa12.93□□□□□ -0.34
USB1-206ENST00000562534 CLCC1Q96S66 551 aa12.93□□□□□ -0.34
USB1-206ENST00000562534 HSPB9Q9BQS6 159 aa12.93□□□□□ -0.34
USB1-206ENST00000562534 OR51J1Q9H342 316 aa12.93□□□□□ -0.34
USB1-206ENST00000562534 C5orf66Q9H5L9 145 aa12.93□□□□□ -0.34
USB1-206ENST00000562534 COMMD9Q9P000 198 aa12.93□□□□□ -0.34
USB1-206ENST00000562534 IGHV7-81A0A0B4J1V7 117 aa12.92□□□□□ -0.34
USB1-206ENST00000562534 TEX13DA0A0J9YY54 714 aaPredicted RBP12.92□□□□□ -0.34
USB1-206ENST00000562534 C3orf85A0A1B0GTC6 90 aa12.92□□□□□ -0.34
USB1-206ENST00000562534 LINC00854A0A1B0GVQ3 168 aa12.92□□□□□ -0.34
USB1-206ENST00000562534 SERPINE2P07093 398 aa12.92□□□□□ -0.34
USB1-206ENST00000562534 RPA2P15927 270 aa12.92□□□□□ -0.34
USB1-206ENST00000562534 POU2AF1Q16633 256 aa12.92□□□□□ -0.34
USB1-206ENST00000562534 ZNF585BQ52M93 769 aa12.92□□□□□ -0.34
USB1-206ENST00000562534 SHISA2Q6UWI4 295 aa12.92□□□□□ -0.34
USB1-206ENST00000562534 CADM3Q8N126 398 aa12.92□□□□□ -0.34
USB1-206ENST00000562534 KLHDC1Q8N7A1 406 aa12.92□□□□□ -0.34
USB1-206ENST00000562534 OR4A5Q8NH83 315 aa12.92□□□□□ -0.34
USB1-206ENST00000562534 WFDC12Q8WWY7 111 aa12.92□□□□□ -0.34
USB1-206ENST00000562534 ZNF580Q9UK33 172 aa12.92□□□□□ -0.34
USB1-206ENST00000562534 KCNIP3Q9Y2W7 256 aa12.92□□□□□ -0.34
USB1-206ENST00000562534 H0Y980 276 aa12.91□□□□□ -0.34
USB1-206ENST00000562534 CNIH1O95406 144 aa12.91□□□□□ -0.34
USB1-206ENST00000562534 SAA1P0DJI8 122 aaPredicted RBP12.91□□□□□ -0.34
USB1-206ENST00000562534 SLC35B1P78383 322 aa12.91□□□□□ -0.34
USB1-206ENST00000562534 TMEM267Q0VDI3 215 aaPredicted RBP12.91□□□□□ -0.34
USB1-206ENST00000562534 FXYD3Q14802 87 aa12.91□□□□□ -0.34
USB1-206ENST00000562534 PRSS8Q16651 343 aa12.91□□□□□ -0.34
USB1-206ENST00000562534 TMEM95Q3KNT9 176 aa12.91□□□□□ -0.34
USB1-206ENST00000562534 SGPP2Q8IWX5 399 aa12.91□□□□□ -0.34
USB1-206ENST00000562534 MMD2Q8IY49 270 aa12.91□□□□□ -0.34
USB1-206ENST00000562534 VKORC1L1Q8N0U8 176 aa12.91□□□□□ -0.34
USB1-206ENST00000562534 PUSL1Q8N0Z8 303 aaKnown RBP12.91□□□□□ -0.34
USB1-206ENST00000562534 STPG2Q8N412 459 aa12.91□□□□□ -0.34
USB1-206ENST00000562534 OR5AU1Q8NGC0 362 aa12.91□□□□□ -0.34
USB1-206ENST00000562534 PSMB11A5LHX3 300 aa12.9□□□□□ -0.34
USB1-206ENST00000562534 PLA2G10O15496 165 aa12.9□□□□□ -0.34
USB1-206ENST00000562534 ACTL6BO94805 426 aa12.9□□□□□ -0.34
USB1-206ENST00000562534 ATG12O94817 140 aa12.9□□□□□ -0.34
USB1-206ENST00000562534 CA2P00918 260 aa12.9□□□□□ -0.34
USB1-206ENST00000562534 ERVK-16P61578 105 aa12.9□□□□□ -0.34
USB1-206ENST00000562534 PJVKQ0ZLH3 352 aa12.9□□□□□ -0.34
USB1-206ENST00000562534 RBMS2Q15434 407 aaKnown RBP12.9□□□□□ -0.34
USB1-206ENST00000562534 DMBX1Q8NFW5 382 aa12.9□□□□□ -0.34
USB1-206ENST00000562534 TMEM167AQ8TBQ9 72 aa12.9□□□□□ -0.34
USB1-206ENST00000562534 R3HDM4Q96D70 268 aa12.9□□□□□ -0.34
USB1-206ENST00000562534 NOL4LQ96MY1 436 aaPredicted RBP12.9□□□□□ -0.34
USB1-206ENST00000562534 BET1LQ9NYM9 111 aa12.9□□□□□ -0.34
USB1-206ENST00000562534 VSIG4Q9Y279 399 aa12.9□□□□□ -0.34
USB1-206ENST00000562534 CRYM-AS1A6NIL9 109 aa12.89□□□□□ -0.35
USB1-206ENST00000562534 LYRM1O43325 122 aa12.89□□□□□ -0.35
USB1-206ENST00000562534 KBTBD11O94819 623 aa12.89□□□□□ -0.35
USB1-206ENST00000562534 S1PR2O95136 353 aa12.89□□□□□ -0.35
USB1-206ENST00000562534 KRASP01116 189 aa12.89□□□□□ -0.35
USB1-206ENST00000562534 IL6RP08887 468 aaPredicted RBP12.89□□□□□ -0.35
USB1-206ENST00000562534 VDAC1P21796 283 aa12.89□□□□□ -0.35
USB1-206ENST00000562534 MAS1LP35410 378 aa12.89□□□□□ -0.35
USB1-206ENST00000562534 DHODHQ02127 395 aa12.89□□□□□ -0.35
USB1-206ENST00000562534 AKIRIN2Q53H80 203 aa12.89□□□□□ -0.35
USB1-206ENST00000562534 OR4A47Q6IF82 309 aa12.89□□□□□ -0.35
USB1-206ENST00000562534 SSX9Q7RTT3 188 aa12.89□□□□□ -0.35
USB1-206ENST00000562534 COMMD1Q8N668 190 aa12.89□□□□□ -0.35
USB1-206ENST00000562534 SGMS2Q8NHU3 365 aa12.89□□□□□ -0.35
USB1-206ENST00000562534 WIPF2Q8TF74 440 aaPredicted RBP12.89□□□□□ -0.35
USB1-206ENST00000562534 TMEM68Q96MH6 324 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms