RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 BPIFB6Q8NFQ5 453 aa8.7□□□□□ -1.02
NSMCE1-202ENST00000561960 GPHA2Q96T91 129 aa8.7□□□□□ -1.02
NSMCE1-202ENST00000561960 GHRLQ9UBU3 117 aa8.7□□□□□ -1.02
NSMCE1-202ENST00000561960 IGHV3OR16-8A0A075B7F1 116 aa8.69□□□□□ -1.02
NSMCE1-202ENST00000561960 TRBV6-6A0A0A6YYG2 114 aa8.69□□□□□ -1.02
NSMCE1-202ENST00000561960 TRBV9A0A0B4J1U6 114 aa8.69□□□□□ -1.02
NSMCE1-202ENST00000561960 A0A1B0GW64 132 aa8.69□□□□□ -1.02
NSMCE1-202ENST00000561960 IRGMA1A4Y4 181 aa8.69□□□□□ -1.02
NSMCE1-202ENST00000561960 FOXI3A8MTJ6 420 aaPredicted RBP8.69□□□□□ -1.02
NSMCE1-202ENST00000561960 FABP7O15540 132 aa8.69□□□□□ -1.02
NSMCE1-202ENST00000561960 FCGR3BO75015 233 aa8.69□□□□□ -1.02
NSMCE1-202ENST00000561960 ATP5HO75947 161 aa8.69□□□□□ -1.02
NSMCE1-202ENST00000561960 BPNT1O95861 308 aa8.69□□□□□ -1.02
NSMCE1-202ENST00000561960 AREGP15514 252 aa8.69□□□□□ -1.02
NSMCE1-202ENST00000561960 RPA2P15927 270 aa8.69□□□□□ -1.02
NSMCE1-202ENST00000561960 SRMP19623 302 aa8.69□□□□□ -1.02
NSMCE1-202ENST00000561960 MAPK3P27361 379 aaPredicted RBP8.69□□□□□ -1.02
NSMCE1-202ENST00000561960 FCGR2BP31994 310 aaPredicted RBP8.69□□□□□ -1.02
NSMCE1-202ENST00000561960 TAS2R43P59537 309 aa8.69□□□□□ -1.02
NSMCE1-202ENST00000561960 UBE2KP61086 200 aa8.69□□□□□ -1.02
NSMCE1-202ENST00000561960 MED21Q13503 144 aa8.69□□□□□ -1.02
NSMCE1-202ENST00000561960 ZNF124Q15973 351 aa8.69□□□□□ -1.02
NSMCE1-202ENST00000561960 HSD17B12Q53GQ0 312 aa8.69□□□□□ -1.02
NSMCE1-202ENST00000561960 FBLIM1Q8WUP2 373 aa8.69□□□□□ -1.02
NSMCE1-202ENST00000561960 ELF5Q9UKW6 265 aaPredicted RBP8.69□□□□□ -1.02
NSMCE1-202ENST00000561960 DNAH17Q9UFH2 4485 aa8.69□□□□□ -1.02
NSMCE1-202ENST00000561960 IGKV1D-8A0A087WSZ0 117 aa8.68□□□□□ -1.02
NSMCE1-202ENST00000561960 EFCAB10A6NFE3 127 aa8.68□□□□□ -1.02
NSMCE1-202ENST00000561960 MFSD2BA6NFX1 497 aa8.68□□□□□ -1.02
NSMCE1-202ENST00000561960 TEX22C9J3V5 150 aa8.68□□□□□ -1.02
NSMCE1-202ENST00000561960 DEFB4AO15263 64 aa8.68□□□□□ -1.02
NSMCE1-202ENST00000561960 SPRY2O43597 315 aa8.68□□□□□ -1.02
NSMCE1-202ENST00000561960 GGCTO75223 188 aaKnown RBP8.68□□□□□ -1.02
NSMCE1-202ENST00000561960 ACTL6BO94805 426 aa8.68□□□□□ -1.02
NSMCE1-202ENST00000561960 FCGR3AP08637 254 aa8.68□□□□□ -1.02
NSMCE1-202ENST00000561960 GNB3P16520 340 aa8.68□□□□□ -1.02
NSMCE1-202ENST00000561960 DUTP33316 252 aaKnown RBP8.68□□□□□ -1.02
NSMCE1-202ENST00000561960 NANOS2P60321 138 aaKnown RBP8.68□□□□□ -1.02
NSMCE1-202ENST00000561960 ZNF585BQ52M93 769 aa8.68□□□□□ -1.02
NSMCE1-202ENST00000561960 HES5Q5TA89 166 aa8.68□□□□□ -1.02
NSMCE1-202ENST00000561960 SSX9Q7RTT3 188 aa8.68□□□□□ -1.02
NSMCE1-202ENST00000561960 NANOGP1Q8N7R0 232 aa8.68□□□□□ -1.02
NSMCE1-202ENST00000561960 NECAP1Q8NC96 275 aa8.68□□□□□ -1.02
NSMCE1-202ENST00000561960 OR5B3Q8NH48 314 aa8.68□□□□□ -1.02
NSMCE1-202ENST00000561960 OR10J5Q8NHC4 309 aa8.68□□□□□ -1.02
NSMCE1-202ENST00000561960 PHLDA1Q8WV24 401 aaPredicted RBP8.68□□□□□ -1.02
NSMCE1-202ENST00000561960 KCTD12Q96CX2 325 aaKnown RBP8.68□□□□□ -1.02
NSMCE1-202ENST00000561960 GINS4Q9BRT9 223 aa8.68□□□□□ -1.02
NSMCE1-202ENST00000561960 URM1Q9BTM9 101 aaKnown RBP8.68□□□□□ -1.02
NSMCE1-202ENST00000561960 FBXL17Q9UF56 701 aa8.68□□□□□ -1.02
NSMCE1-202ENST00000561960 KCNK7Q9Y2U2 307 aa8.68□□□□□ -1.02
NSMCE1-202ENST00000561960 PKD1P98161 4303 aa8.68□□□□□ -1.02
NSMCE1-202ENST00000561960 DPPA5A6NC42 116 aa8.67□□□□□ -1.02
NSMCE1-202ENST00000561960 ZNF207O43670 478 aaKnown RBP8.67□□□□□ -1.02
NSMCE1-202ENST00000561960 IL6RP08887 468 aaPredicted RBP8.67□□□□□ -1.02
NSMCE1-202ENST00000561960 CTRB1P17538 263 aa8.67□□□□□ -1.02
NSMCE1-202ENST00000561960 RPS25P62851 125 aaKnown RBP8.67□□□□□ -1.02
NSMCE1-202ENST00000561960 RPL30P62888 115 aaKnown RBP8.67□□□□□ -1.02
NSMCE1-202ENST00000561960 RAB11BQ15907 218 aa8.67□□□□□ -1.02
NSMCE1-202ENST00000561960 LIPKQ5VXJ0 399 aa8.67□□□□□ -1.02
NSMCE1-202ENST00000561960 CTRB2Q6GPI1 263 aa8.67□□□□□ -1.02
NSMCE1-202ENST00000561960 TTC9CQ8N5M4 171 aa8.67□□□□□ -1.02
NSMCE1-202ENST00000561960 TEX45Q8NA69 505 aa8.67□□□□□ -1.02
NSMCE1-202ENST00000561960 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.67□□□□□ -1.02
NSMCE1-202ENST00000561960 SETD9Q8NE22 299 aa8.67□□□□□ -1.02
NSMCE1-202ENST00000561960 OR4A4PQ8NGN8 299 aa8.67□□□□□ -1.02
NSMCE1-202ENST00000561960 TMEM68Q96MH6 324 aa8.67□□□□□ -1.02
NSMCE1-202ENST00000561960 RIMS4Q9H426 269 aaPredicted RBP8.67□□□□□ -1.02
NSMCE1-202ENST00000561960 TECRQ9NZ01 308 aaKnown RBP8.67□□□□□ -1.02
NSMCE1-202ENST00000561960 PSORS1C1Q9UIG5 152 aa8.67□□□□□ -1.02
NSMCE1-202ENST00000561960 IGHV3-21A0A0B4J1V1 117 aa8.66□□□□□ -1.02
NSMCE1-202ENST00000561960 TMEM272A0A1B0GTI8 110 aa8.66□□□□□ -1.02
NSMCE1-202ENST00000561960 CRHBPP24387 322 aa8.66□□□□□ -1.02
NSMCE1-202ENST00000561960 GPR183P32249 361 aa8.66□□□□□ -1.02
NSMCE1-202ENST00000561960 MRPS15P82914 257 aaKnown RBP8.66□□□□□ -1.02
NSMCE1-202ENST00000561960 CDK10Q15131 360 aa8.66□□□□□ -1.02
NSMCE1-202ENST00000561960 RBPMS2Q6ZRY4 209 aaKnown RBP8.66□□□□□ -1.02
NSMCE1-202ENST00000561960 APRG1Q8IVJ8 170 aa8.66□□□□□ -1.02
NSMCE1-202ENST00000561960 FAM89BQ8N5H3 189 aa8.66□□□□□ -1.02
NSMCE1-202ENST00000561960 OR1L6Q8NGR2 347 aa8.66□□□□□ -1.02
NSMCE1-202ENST00000561960 SPIN2AQ99865 258 aa8.66□□□□□ -1.02
NSMCE1-202ENST00000561960 SPIN2BQ9BPZ2 258 aa8.66□□□□□ -1.02
NSMCE1-202ENST00000561960 KLK5Q9Y337 293 aaPredicted RBP8.66□□□□□ -1.02
NSMCE1-202ENST00000561960 DYNC1H1Q14204 4646 aaKnown RBP8.65□□□□□ -1.02
NSMCE1-202ENST00000561960 TRBV6-7A0A0A0MS04 114 aa8.65□□□□□ -1.02
NSMCE1-202ENST00000561960 SMIM30A4D0T7 59 aa8.65□□□□□ -1.02
NSMCE1-202ENST00000561960 PTGES3LE9PB15 166 aa8.65□□□□□ -1.02
NSMCE1-202ENST00000561960 SLC17A2O00624 439 aa8.65□□□□□ -1.02
NSMCE1-202ENST00000561960 DENRO43583 198 aaKnown RBP8.65□□□□□ -1.02
NSMCE1-202ENST00000561960 HSMCR30P0CW71 290 aa8.65□□□□□ -1.02
NSMCE1-202ENST00000561960 NFYAP23511 347 aaPredicted RBP8.65□□□□□ -1.02
NSMCE1-202ENST00000561960 MED22Q15528 200 aa8.65□□□□□ -1.02
NSMCE1-202ENST00000561960 C2orf76Q3KRA6 126 aa8.65□□□□□ -1.02
NSMCE1-202ENST00000561960 KCTD9Q7L273 389 aa8.65□□□□□ -1.02
NSMCE1-202ENST00000561960 GATAD1Q8WUU5 269 aa8.65□□□□□ -1.02
NSMCE1-202ENST00000561960 PHYHIPQ92561 330 aa8.65□□□□□ -1.02
NSMCE1-202ENST00000561960 FANCD2OSQ96PS1 177 aa8.65□□□□□ -1.02
NSMCE1-202ENST00000561960 CABLES2Q9BTV7 478 aa8.65□□□□□ -1.02
NSMCE1-202ENST00000561960 HSF4Q9ULV5 492 aa8.65□□□□□ -1.02
NSMCE1-202ENST00000561960 MGAT4AQ9UM21 535 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms