RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 RAB6AP20340 208 aa8.83□□□□□ -1
USP3-220ENST00000561381 GADD45AP24522 165 aa8.83□□□□□ -1
USP3-220ENST00000561381 RHOGP84095 191 aa8.83□□□□□ -1
USP3-220ENST00000561381 TAGLNQ01995 201 aaKnown RBP8.83□□□□□ -1
USP3-220ENST00000561381 ARFRP1Q13795 201 aa8.83□□□□□ -1
USP3-220ENST00000561381 TBCEQ15813 527 aaPredicted RBP8.83□□□□□ -1
USP3-220ENST00000561381 VMA21Q3ZAQ7 101 aa8.83□□□□□ -1
USP3-220ENST00000561381 C10orf55Q5SWW7 151 aa8.83□□□□□ -1
USP3-220ENST00000561381 ADAMTSL5Q6ZMM2 481 aa8.83□□□□□ -1
USP3-220ENST00000561381 ZNF367Q7RTV3 350 aa8.83□□□□□ -1
USP3-220ENST00000561381 ACOT12Q8WYK0 555 aa8.83□□□□□ -1
USP3-220ENST00000561381 ISOC1Q96CN7 298 aa8.83□□□□□ -1
USP3-220ENST00000561381 ZNF430Q9H8G1 570 aaPredicted RBP8.83□□□□□ -1
USP3-220ENST00000561381 AKIP1Q9NQ31 210 aa8.83□□□□□ -1
USP3-220ENST00000561381 BMPR1BO00238 502 aa8.82□□□□□ -1
USP3-220ENST00000561381 MPPED1O15442 326 aa8.82□□□□□ -1
USP3-220ENST00000561381 OR2A4O95047 310 aa8.82□□□□□ -1
USP3-220ENST00000561381 SAA1P0DJI8 122 aaPredicted RBP8.82□□□□□ -1
USP3-220ENST00000561381 RAB3BP20337 219 aa8.82□□□□□ -1
USP3-220ENST00000561381 EDN2P20800 178 aa8.82□□□□□ -1
USP3-220ENST00000561381 MYL9P24844 172 aa8.82□□□□□ -1
USP3-220ENST00000561381 TALDO1P37837 337 aa8.82□□□□□ -1
USP3-220ENST00000561381 RANBP1P43487 201 aa8.82□□□□□ -1
USP3-220ENST00000561381 MECP2P51608 486 aaKnown RBP8.82□□□□□ -1
USP3-220ENST00000561381 RPL30P62888 115 aaKnown RBP8.82□□□□□ -1
USP3-220ENST00000561381 EXOSC2Q13868 293 aaKnown RBP8.82□□□□□ -1
USP3-220ENST00000561381 OR2B11Q5JQS5 317 aa8.82□□□□□ -1
USP3-220ENST00000561381 C22orf42Q6IC83 251 aa8.82□□□□□ -1
USP3-220ENST00000561381 LCN12Q6JVE5 192 aa8.82□□□□□ -1
USP3-220ENST00000561381 Q6ZS49 121 aa8.82□□□□□ -1
USP3-220ENST00000561381 C19orf35Q6ZS72 473 aa8.82□□□□□ -1
USP3-220ENST00000561381 VKORC1L1Q8N0U8 176 aa8.82□□□□□ -1
USP3-220ENST00000561381 SNAPC3Q92966 411 aa8.82□□□□□ -1
USP3-220ENST00000561381 ADTRPQ96IZ2 230 aa8.82□□□□□ -1
USP3-220ENST00000561381 CNBD2Q96M20 576 aa8.82□□□□□ -1
USP3-220ENST00000561381 SPATA25Q9BR10 227 aa8.82□□□□□ -1
USP3-220ENST00000561381 ATG5Q9H1Y0 275 aa8.82□□□□□ -1
USP3-220ENST00000561381 TUBA4BQ9H853 241 aa8.82□□□□□ -1
USP3-220ENST00000561381 RETNQ9HD89 108 aa8.82□□□□□ -1
USP3-220ENST00000561381 NDUFB11Q9NX14 153 aa8.82□□□□□ -1
USP3-220ENST00000561381 SIGLEC8Q9NYZ4 499 aa8.82□□□□□ -1
USP3-220ENST00000561381 TRBV9A0A0B4J1U6 114 aa8.81□□□□□ -1
USP3-220ENST00000561381 IGKV1D-13A0A0B4J2D9 117 aa8.81□□□□□ -1
USP3-220ENST00000561381 TRDV1A0A1B0GX56 115 aa8.81□□□□□ -1
USP3-220ENST00000561381 METTL21EPA6NDL7 271 aa8.81□□□□□ -1
USP3-220ENST00000561381 FCGR3BO75015 233 aa8.81□□□□□ -1
USP3-220ENST00000561381 IGLV2-14P01704 120 aa8.81□□□□□ -1
USP3-220ENST00000561381 IGKV1-13P0DP09 117 aa8.81□□□□□ -1
USP3-220ENST00000561381 NFYAP23511 347 aaPredicted RBP8.81□□□□□ -1
USP3-220ENST00000561381 ATP5G2Q06055 141 aa8.81□□□□□ -1
USP3-220ENST00000561381 CDK10Q15131 360 aa8.81□□□□□ -1
USP3-220ENST00000561381 TATDN3Q17R31 274 aa8.81□□□□□ -1
USP3-220ENST00000561381 CDNFQ49AH0 187 aa8.81□□□□□ -1
USP3-220ENST00000561381 GTSCR1Q86UQ5 136 aa8.81□□□□□ -1
USP3-220ENST00000561381 Q8N402 240 aa8.81□□□□□ -1
USP3-220ENST00000561381 OSR1Q8TAX0 266 aaPredicted RBP8.81□□□□□ -1
USP3-220ENST00000561381 DCUN1D5Q9BTE7 237 aa8.81□□□□□ -1
USP3-220ENST00000561381 ST6GALNAC5Q9BVH7 336 aa8.81□□□□□ -1
USP3-220ENST00000561381 PLEKHA3Q9HB20 300 aa8.81□□□□□ -1
USP3-220ENST00000561381 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.8□□□□□ -1
USP3-220ENST00000561381 HMX3A6NHT5 357 aa8.8□□□□□ -1
USP3-220ENST00000561381 FAM223BA6NKX1 122 aa8.8□□□□□ -1
USP3-220ENST00000561381 TUSC2O75896 110 aa8.8□□□□□ -1
USP3-220ENST00000561381 OR2J3O76001 311 aa8.8□□□□□ -1
USP3-220ENST00000561381 HLA-AP01891 365 aaKnown RBP8.8□□□□□ -1
USP3-220ENST00000561381 DTYMKP23919 212 aa8.8□□□□□ -1
USP3-220ENST00000561381 CD300EQ496F6 205 aaPredicted RBP8.8□□□□□ -1
USP3-220ENST00000561381 IZUMO2Q6UXV1 221 aa8.8□□□□□ -1
USP3-220ENST00000561381 KCTD9Q7L273 389 aa8.8□□□□□ -1
USP3-220ENST00000561381 FAM223AQ8IWN6 122 aa8.8□□□□□ -1
USP3-220ENST00000561381 TTC9CQ8N5M4 171 aa8.8□□□□□ -1
USP3-220ENST00000561381 ZNF645Q8N7E2 425 aa8.8□□□□□ -1
USP3-220ENST00000561381 NUDCD2Q8WVJ2 157 aa8.8□□□□□ -1
USP3-220ENST00000561381 PEMTQ9UBM1 199 aa8.8□□□□□ -1
USP3-220ENST00000561381 RBMX2Q9Y388 322 aaKnown RBP8.8□□□□□ -1
USP3-220ENST00000561381 OR2W1Q9Y3N9 320 aa8.8□□□□□ -1
USP3-220ENST00000561381 SELENOKQ9Y6D0 94 aa8.8□□□□□ -1
USP3-220ENST00000561381 EPPK1P58107 5090 aaKnown RBP8.8□□□□□ -1
USP3-220ENST00000561381 A0A1B0GW64 132 aa8.79□□□□□ -1
USP3-220ENST00000561381 TMEM235A6NFC5 223 aa8.79□□□□□ -1
USP3-220ENST00000561381 ZNF785A8K8V0 405 aa8.79□□□□□ -1
USP3-220ENST00000561381 TEX22C9J3V5 150 aa8.79□□□□□ -1
USP3-220ENST00000561381 PPP5D1E7EU14 171 aa8.79□□□□□ -1
USP3-220ENST00000561381 E7EUB6 86 aa8.79□□□□□ -1
USP3-220ENST00000561381 ACTL6BO94805 426 aa8.79□□□□□ -1
USP3-220ENST00000561381 HLA-DQB1P01920 261 aa8.79□□□□□ -1
USP3-220ENST00000561381 CD7P09564 240 aa8.79□□□□□ -1
USP3-220ENST00000561381 BRWD1-AS2P59051 145 aa8.79□□□□□ -1
USP3-220ENST00000561381 CD81P60033 236 aa8.79□□□□□ -1
USP3-220ENST00000561381 C15orf32Q32M92 178 aa8.79□□□□□ -1
USP3-220ENST00000561381 HACD4Q5VWC8 232 aa8.79□□□□□ -1
USP3-220ENST00000561381 LINC00322Q6ZN03 302 aaPredicted RBP8.79□□□□□ -1
USP3-220ENST00000561381 MMD2Q8IY49 270 aa8.79□□□□□ -1
USP3-220ENST00000561381 GPHA2Q96T91 129 aa8.79□□□□□ -1
USP3-220ENST00000561381 SPIN2AQ99865 258 aa8.79□□□□□ -1
USP3-220ENST00000561381 SPIN2BQ9BPZ2 258 aa8.79□□□□□ -1
USP3-220ENST00000561381 FAM110AQ9BQ89 295 aa8.79□□□□□ -1
USP3-220ENST00000561381 WFDC10AQ9H1F0 79 aa8.79□□□□□ -1
USP3-220ENST00000561381 HIPK2Q9H2X6 1198 aa8.79□□□□□ -1
USP3-220ENST00000561381 DMRT1Q9Y5R6 373 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms