RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 TGFAP01135 160 aa8.34□□□□□ -1.07
USP3-219ENST00000561326 MBPP02686 304 aaPredicted RBP8.34□□□□□ -1.07
USP3-219ENST00000561326 CD1BP29016 333 aa8.34□□□□□ -1.07
USP3-219ENST00000561326 BRS3P32247 399 aa8.34□□□□□ -1.07
USP3-219ENST00000561326 ID3Q02535 119 aa8.34□□□□□ -1.07
USP3-219ENST00000561326 POU2AF1Q16633 256 aa8.34□□□□□ -1.07
USP3-219ENST00000561326 TMEM177Q53S58 311 aa8.34□□□□□ -1.07
USP3-219ENST00000561326 GPR157Q5UAW9 335 aa8.34□□□□□ -1.07
USP3-219ENST00000561326 PRSS54Q6PEW0 395 aa8.34□□□□□ -1.07
USP3-219ENST00000561326 PDZD9Q8IXQ8 264 aa8.34□□□□□ -1.07
USP3-219ENST00000561326 OR4D5Q8NGN0 318 aa8.34□□□□□ -1.07
USP3-219ENST00000561326 VSTM2AQ8TAG5 236 aa8.34□□□□□ -1.07
USP3-219ENST00000561326 HARBI1Q96MB7 349 aa8.34□□□□□ -1.07
USP3-219ENST00000561326 TSNAXQ99598 290 aaKnown RBP8.34□□□□□ -1.07
USP3-219ENST00000561326 MS4A7Q9GZW8 240 aaPredicted RBP8.34□□□□□ -1.07
USP3-219ENST00000561326 FKBP11Q9NYL4 201 aa8.34□□□□□ -1.07
USP3-219ENST00000561326 LSM5Q9Y4Y9 91 aaKnown RBP8.34□□□□□ -1.07
USP3-219ENST00000561326 HILPDAQ9Y5L2 63 aa8.34□□□□□ -1.07
USP3-219ENST00000561326 POMT1Q9Y6A1 747 aa8.34□□□□□ -1.07
USP3-219ENST00000561326 A0A096LNT2 108 aa8.33□□□□□ -1.08
USP3-219ENST00000561326 TRAV14DV4A0A0A6YYC5 116 aa8.33□□□□□ -1.08
USP3-219ENST00000561326 IGHV1-69DA0A0B4J2H0 117 aa8.33□□□□□ -1.08
USP3-219ENST00000561326 A0A0D9SG52 128 aa8.33□□□□□ -1.08
USP3-219ENST00000561326 CENPVL3A0A0U1RRI6 287 aa8.33□□□□□ -1.08
USP3-219ENST00000561326 A0A1W2PRD5 423 aa8.33□□□□□ -1.08
USP3-219ENST00000561326 A0A1W2PRF3 423 aa8.33□□□□□ -1.08
USP3-219ENST00000561326 A0A1W2PRM7 423 aa8.33□□□□□ -1.08
USP3-219ENST00000561326 E5RGE8 158 aa8.33□□□□□ -1.08
USP3-219ENST00000561326 K7EPK0 472 aa8.33□□□□□ -1.08
USP3-219ENST00000561326 L7N2F9 121 aa8.33□□□□□ -1.08
USP3-219ENST00000561326 NPFFO15130 113 aa8.33□□□□□ -1.08
USP3-219ENST00000561326 PITX3O75364 302 aa8.33□□□□□ -1.08
USP3-219ENST00000561326 DEDDO75618 318 aa8.33□□□□□ -1.08
USP3-219ENST00000561326 LY86O95711 162 aa8.33□□□□□ -1.08
USP3-219ENST00000561326 IGHV1-69P01742 117 aa8.33□□□□□ -1.08
USP3-219ENST00000561326 P0C879 139 aa8.33□□□□□ -1.08
USP3-219ENST00000561326 LYL1P12980 280 aa8.33□□□□□ -1.08
USP3-219ENST00000561326 NKX2-5P52952 324 aaPredicted RBP8.33□□□□□ -1.08
USP3-219ENST00000561326 BPIFB3P59826 476 aa8.33□□□□□ -1.08
USP3-219ENST00000561326 VAMP2P63027 116 aa8.33□□□□□ -1.08
USP3-219ENST00000561326 DIAPH2-AS1Q14236 149 aa8.33□□□□□ -1.08
USP3-219ENST00000561326 SSX2Q16385 188 aa8.33□□□□□ -1.08
USP3-219ENST00000561326 TMEM249Q2WGJ8 235 aa8.33□□□□□ -1.08
USP3-219ENST00000561326 VMA21Q3ZAQ7 101 aa8.33□□□□□ -1.08
USP3-219ENST00000561326 CYB5R2Q6BCY4 276 aa8.33□□□□□ -1.08
USP3-219ENST00000561326 Q6ZRM9 215 aa8.33□□□□□ -1.08
USP3-219ENST00000561326 ACOT7LQ6ZUV0 252 aa8.33□□□□□ -1.08
USP3-219ENST00000561326 SSX9Q7RTT3 188 aa8.33□□□□□ -1.08
USP3-219ENST00000561326 FAM71E2Q8N5Q1 922 aa8.33□□□□□ -1.08
USP3-219ENST00000561326 OR11H4Q8NGC9 324 aa8.33□□□□□ -1.08
USP3-219ENST00000561326 OR4A5Q8NH83 315 aa8.33□□□□□ -1.08
USP3-219ENST00000561326 DCUN1D4Q92564 292 aa8.33□□□□□ -1.08
USP3-219ENST00000561326 RAB40CQ96S21 281 aa8.33□□□□□ -1.08
USP3-219ENST00000561326 RNF126Q9BV68 326 aa8.33□□□□□ -1.08
USP3-219ENST00000561326 MFFQ9GZY8 342 aa8.33□□□□□ -1.08
USP3-219ENST00000561326 UNC79Q9P2D8 2635 aa8.33□□□□□ -1.08
USP3-219ENST00000561326 MBD2Q9UBB5 411 aa8.33□□□□□ -1.08
USP3-219ENST00000561326 NSG2Q9Y328 171 aa8.33□□□□□ -1.08
USP3-219ENST00000561326 CSPG4Q6UVK1 2322 aa8.32□□□□□ -1.08
USP3-219ENST00000561326 PDZD2O15018 2839 aa8.32□□□□□ -1.08
USP3-219ENST00000561326 PLXNB1O43157 2135 aa8.32□□□□□ -1.08
USP3-219ENST00000561326 TEX15Q9BXT5 2789 aa8.32□□□□□ -1.08
USP3-219ENST00000561326 A0A0G2JRQ6 117 aa8.32□□□□□ -1.08
USP3-219ENST00000561326 G3V3Q6 166 aa8.32□□□□□ -1.08
USP3-219ENST00000561326 ARPC5O15511 151 aa8.32□□□□□ -1.08
USP3-219ENST00000561326 GPR137BO60478 399 aa8.32□□□□□ -1.08
USP3-219ENST00000561326 OR2F2O95006 317 aa8.32□□□□□ -1.08
USP3-219ENST00000561326 IFNA17P01571 189 aa8.32□□□□□ -1.08
USP3-219ENST00000561326 IGKV1-16P04430 117 aa8.32□□□□□ -1.08
USP3-219ENST00000561326 RPL23AP62750 156 aaKnown RBP8.32□□□□□ -1.08
USP3-219ENST00000561326 OR2F1Q13607 317 aa8.32□□□□□ -1.08
USP3-219ENST00000561326 IZUMO4Q1ZYL8 232 aa8.32□□□□□ -1.08
USP3-219ENST00000561326 CXorf66Q5JRM2 361 aaPredicted RBP8.32□□□□□ -1.08
USP3-219ENST00000561326 OR4A47Q6IF82 309 aa8.32□□□□□ -1.08
USP3-219ENST00000561326 LHFPL4Q7Z7J7 247 aa8.32□□□□□ -1.08
USP3-219ENST00000561326 CLCC1Q96S66 551 aa8.32□□□□□ -1.08
USP3-219ENST00000561326 ZC4H2Q9NQZ6 224 aa8.32□□□□□ -1.08
USP3-219ENST00000561326 TMEM140Q9NV12 185 aa8.32□□□□□ -1.08
USP3-219ENST00000561326 BET1LQ9NYM9 111 aa8.32□□□□□ -1.08
USP3-219ENST00000561326 PRNDQ9UKY0 176 aa8.32□□□□□ -1.08
USP3-219ENST00000561326 HSPB11Q9Y547 144 aa8.32□□□□□ -1.08
USP3-219ENST00000561326 IGHV3-72A0A0B4J1Y9 119 aa8.31□□□□□ -1.08
USP3-219ENST00000561326 A0A1W2PPI3 338 aa8.31□□□□□ -1.08
USP3-219ENST00000561326 TIMM23O14925 209 aa8.31□□□□□ -1.08
USP3-219ENST00000561326 SYNGR2O43760 224 aa8.31□□□□□ -1.08
USP3-219ENST00000561326 CHST1O43916 411 aa8.31□□□□□ -1.08
USP3-219ENST00000561326 MOSP00540 346 aa8.31□□□□□ -1.08
USP3-219ENST00000561326 FAM106CPP0CH98 169 aa8.31□□□□□ -1.08
USP3-219ENST00000561326 IGHV4-31P0DP07 118 aa8.31□□□□□ -1.08
USP3-219ENST00000561326 SAA4P35542 130 aa8.31□□□□□ -1.08
USP3-219ENST00000561326 P2RY1P47900 373 aa8.31□□□□□ -1.08
USP3-219ENST00000561326 SPCS3P61009 180 aa8.31□□□□□ -1.08
USP3-219ENST00000561326 POLR2GP62487 172 aaKnown RBP eCLIP8.31□□□□□ -1.08
USP3-219ENST00000561326 TNFRSF9Q07011 255 aa8.31□□□□□ -1.08
USP3-219ENST00000561326 HABP2Q14520 560 aaPredicted RBP8.31□□□□□ -1.08
USP3-219ENST00000561326 LGALSLQ3ZCW2 172 aaPredicted RBP8.31□□□□□ -1.08
USP3-219ENST00000561326 ZNF429Q86V71 674 aa8.31□□□□□ -1.08
USP3-219ENST00000561326 KRTAP1-3Q8IUG1 177 aa8.31□□□□□ -1.08
USP3-219ENST00000561326 VKORC1L1Q8N0U8 176 aa8.31□□□□□ -1.08
USP3-219ENST00000561326 TEX29Q8N6K0 151 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms