RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 TUSC2O75896 110 aa20.56■□□□□ 0.88
SNRPA1-215ENST00000561187 HAGHQ16775 308 aa20.56■□□□□ 0.88
SNRPA1-215ENST00000561187 TATDN3Q17R31 274 aa20.56■□□□□ 0.88
SNRPA1-215ENST00000561187 LCN12Q6JVE5 192 aa20.56■□□□□ 0.88
SNRPA1-215ENST00000561187 KCTD9Q7L273 389 aa20.56■□□□□ 0.88
SNRPA1-215ENST00000561187 RETNQ9HD89 108 aa20.56■□□□□ 0.88
SNRPA1-215ENST00000561187 BMPR1BO00238 502 aa20.55■□□□□ 0.88
SNRPA1-215ENST00000561187 ACTL6BO94805 426 aa20.55■□□□□ 0.88
SNRPA1-215ENST00000561187 CDNFQ49AH0 187 aa20.55■□□□□ 0.88
SNRPA1-215ENST00000561187 ZNF645Q8N7E2 425 aa20.55■□□□□ 0.88
SNRPA1-215ENST00000561187 OSR1Q8TAX0 266 aaPredicted RBP20.55■□□□□ 0.88
SNRPA1-215ENST00000561187 SNAPC3Q92966 411 aa20.55■□□□□ 0.88
SNRPA1-215ENST00000561187 SPATA25Q9BR10 227 aa20.55■□□□□ 0.88
SNRPA1-215ENST00000561187 VCX3BQ9H321 246 aa20.55■□□□□ 0.88
SNRPA1-215ENST00000561187 EDA2RQ9HAV5 297 aa20.55■□□□□ 0.88
SNRPA1-215ENST00000561187 PLEKHA3Q9HB20 300 aa20.55■□□□□ 0.88
SNRPA1-215ENST00000561187 TMEM235A6NFC5 223 aa20.54■□□□□ 0.88
SNRPA1-215ENST00000561187 HMX3A6NHT5 357 aa20.54■□□□□ 0.88
SNRPA1-215ENST00000561187 A8MZ25 164 aa20.54■□□□□ 0.88
SNRPA1-215ENST00000561187 BRI3O95415 125 aa20.54■□□□□ 0.88
SNRPA1-215ENST00000561187 RPL30P62888 115 aaKnown RBP20.54■□□□□ 0.88
SNRPA1-215ENST00000561187 ATP5G2Q06055 141 aa20.54■□□□□ 0.88
SNRPA1-215ENST00000561187 CDK10Q15131 360 aa20.54■□□□□ 0.88
SNRPA1-215ENST00000561187 Q8N402 240 aa20.54■□□□□ 0.88
SNRPA1-215ENST00000561187 THAP7Q9BT49 309 aaPredicted RBP20.54■□□□□ 0.88
SNRPA1-215ENST00000561187 SELENOKQ9Y6D0 94 aa20.54■□□□□ 0.88
SNRPA1-215ENST00000561187 IGKV1D-13A0A0B4J2D9 117 aa20.53■□□□□ 0.88
SNRPA1-215ENST00000561187 OR2J3O76001 311 aa20.53■□□□□ 0.88
SNRPA1-215ENST00000561187 OR2A4O95047 310 aa20.53■□□□□ 0.88
SNRPA1-215ENST00000561187 IGKV1-13P0DP09 117 aa20.53■□□□□ 0.88
SNRPA1-215ENST00000561187 EDN2P20800 178 aa20.53■□□□□ 0.88
SNRPA1-215ENST00000561187 DTYMKP23919 212 aa20.53■□□□□ 0.88
SNRPA1-215ENST00000561187 ADAMTSL5Q6ZMM2 481 aa20.53■□□□□ 0.88
SNRPA1-215ENST00000561187 Q6ZS49 121 aa20.53■□□□□ 0.88
SNRPA1-215ENST00000561187 FAM223BA6NKX1 122 aa20.52■□□□□ 0.88
SNRPA1-215ENST00000561187 PPP5D1E7EU14 171 aa20.52■□□□□ 0.88
SNRPA1-215ENST00000561187 HLA-AP01891 365 aaKnown RBP20.52■□□□□ 0.88
SNRPA1-215ENST00000561187 PSMB9P28065 219 aa20.52■□□□□ 0.88
SNRPA1-215ENST00000561187 FAM223AQ8IWN6 122 aa20.52■□□□□ 0.88
SNRPA1-215ENST00000561187 GPHA2Q96T91 129 aa20.52■□□□□ 0.88
SNRPA1-215ENST00000561187 PEMTQ9UBM1 199 aa20.52■□□□□ 0.88
SNRPA1-215ENST00000561187 SPATA2Q9UM82 520 aa20.52■□□□□ 0.88
SNRPA1-215ENST00000561187 RBMX2Q9Y388 322 aaKnown RBP20.52■□□□□ 0.88
SNRPA1-215ENST00000561187 OR2W1Q9Y3N9 320 aa20.52■□□□□ 0.88
SNRPA1-215ENST00000561187 IGHV3-23P01764 117 aa20.51■□□□□ 0.87
SNRPA1-215ENST00000561187 HSPA13P48723 471 aa20.51■□□□□ 0.87
SNRPA1-215ENST00000561187 CD81P60033 236 aa20.51■□□□□ 0.87
SNRPA1-215ENST00000561187 HACD4Q5VWC8 232 aa20.51■□□□□ 0.87
SNRPA1-215ENST00000561187 MMD2Q8IY49 270 aa20.51■□□□□ 0.87
SNRPA1-215ENST00000561187 DYNLRB2Q8TF09 96 aa20.51■□□□□ 0.87
SNRPA1-215ENST00000561187 TCTEX1D2Q8WW35 142 aa20.51■□□□□ 0.87
SNRPA1-215ENST00000561187 SPIN2AQ99865 258 aa20.51■□□□□ 0.87
SNRPA1-215ENST00000561187 SPIN2BQ9BPZ2 258 aa20.51■□□□□ 0.87
SNRPA1-215ENST00000561187 FAM110AQ9BQ89 295 aa20.51■□□□□ 0.87
SNRPA1-215ENST00000561187 DAPK2Q9UIK4 370 aa20.51■□□□□ 0.87
SNRPA1-215ENST00000561187 MRPS7Q9Y2R9 242 aaKnown RBP20.51■□□□□ 0.87
SNRPA1-215ENST00000561187 PRELID3BQ9Y3B1 194 aa20.51■□□□□ 0.87
SNRPA1-215ENST00000561187 S4R3C0 116 aa20.51■□□□□ 0.87
SNRPA1-215ENST00000561187 LCE6AA0A183 80 aa20.5■□□□□ 0.87
SNRPA1-215ENST00000561187 CREBL2O60519 120 aaPredicted RBP20.5■□□□□ 0.87
SNRPA1-215ENST00000561187 CD36P16671 472 aa20.5■□□□□ 0.87
SNRPA1-215ENST00000561187 GNG2P59768 71 aa20.5■□□□□ 0.87
SNRPA1-215ENST00000561187 CD300EQ496F6 205 aaPredicted RBP20.5■□□□□ 0.87
SNRPA1-215ENST00000561187 LGALS14Q8TCE9 139 aa20.5■□□□□ 0.87
SNRPA1-215ENST00000561187 FYTTD1Q96QD9 318 aaKnown RBP20.5■□□□□ 0.87
SNRPA1-215ENST00000561187 WFDC10AQ9H1F0 79 aa20.5■□□□□ 0.87
SNRPA1-215ENST00000561187 TAS2R8Q9NYW2 309 aa20.5■□□□□ 0.87
SNRPA1-215ENST00000561187 IGLV2-14P01704 120 aa20.49■□□□□ 0.87
SNRPA1-215ENST00000561187 C15orf32Q32M92 178 aa20.49■□□□□ 0.87
SNRPA1-215ENST00000561187 SSX9Q7RTT3 188 aa20.49■□□□□ 0.87
SNRPA1-215ENST00000561187 TXNL4BQ9NX01 149 aaKnown RBP20.49■□□□□ 0.87
SNRPA1-215ENST00000561187 TRBV9A0A0B4J1U6 114 aa20.48■□□□□ 0.87
SNRPA1-215ENST00000561187 NOTOA8MTQ0 251 aa20.48■□□□□ 0.87
SNRPA1-215ENST00000561187 HLA-DQB1P01920 261 aa20.48■□□□□ 0.87
SNRPA1-215ENST00000561187 ARL6IP1Q15041 203 aa20.48■□□□□ 0.87
SNRPA1-215ENST00000561187 SIGLEC8Q9NYZ4 499 aa20.48■□□□□ 0.87
SNRPA1-215ENST00000561187 DNAH1Q9P2D7 4330 aa20.48■□□□□ 0.87
SNRPA1-215ENST00000561187 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP20.47■□□□□ 0.87
SNRPA1-215ENST00000561187 SSX5O60225 188 aa20.47■□□□□ 0.87
SNRPA1-215ENST00000561187 PTHLHP12272 177 aa20.47■□□□□ 0.87
SNRPA1-215ENST00000561187 TTC9CQ8N5M4 171 aa20.47■□□□□ 0.87
SNRPA1-215ENST00000561187 OR4S2Q8NH73 311 aa20.47■□□□□ 0.87
SNRPA1-215ENST00000561187 CENPOQ9BU64 300 aa20.47■□□□□ 0.87
SNRPA1-215ENST00000561187 RRP15Q9Y3B9 282 aaKnown RBP20.47■□□□□ 0.87
SNRPA1-215ENST00000561187 EPPK1P58107 5090 aaKnown RBP20.47■□□□□ 0.87
SNRPA1-215ENST00000561187 DPPA5A6NC42 116 aa20.46■□□□□ 0.87
SNRPA1-215ENST00000561187 TEX22C9J3V5 150 aa20.46■□□□□ 0.87
SNRPA1-215ENST00000561187 E7EUB6 86 aa20.46■□□□□ 0.87
SNRPA1-215ENST00000561187 TNFSF12O43508 249 aa20.46■□□□□ 0.87
SNRPA1-215ENST00000561187 KBTBD11O94819 623 aa20.46■□□□□ 0.87
SNRPA1-215ENST00000561187 FCER2P06734 321 aa20.46■□□□□ 0.87
SNRPA1-215ENST00000561187 CD7P09564 240 aa20.46■□□□□ 0.87
SNRPA1-215ENST00000561187 MYOD1P15172 320 aa20.46■□□□□ 0.87
SNRPA1-215ENST00000561187 GUCA2BQ16661 112 aa20.46■□□□□ 0.87
SNRPA1-215ENST00000561187 NECAP1Q8NC96 275 aa20.46■□□□□ 0.87
SNRPA1-215ENST00000561187 NEURL2Q9BR09 285 aa20.46■□□□□ 0.87
SNRPA1-215ENST00000561187 OR51E2Q9H255 320 aa20.46■□□□□ 0.87
SNRPA1-215ENST00000561187 FBXL7Q9UJT9 491 aa20.46■□□□□ 0.87
SNRPA1-215ENST00000561187 CEPT1Q9Y6K0 416 aa20.46■□□□□ 0.87
SNRPA1-215ENST00000561187 ERICH4A6NGS2 130 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms