RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 ARPC1BO15143 372 aaKnown RBP12.37□□□□□ -0.43
LMX1B-204ENST00000561065 FCGR3BO75015 233 aa12.37□□□□□ -0.43
LMX1B-204ENST00000561065 CA2P00918 260 aa12.37□□□□□ -0.43
LMX1B-204ENST00000561065 PPYP01298 95 aa12.37□□□□□ -0.43
LMX1B-204ENST00000561065 SMIM18P0DKX4 95 aa12.37□□□□□ -0.43
LMX1B-204ENST00000561065 UBE2KP61086 200 aa12.37□□□□□ -0.43
LMX1B-204ENST00000561065 DGCR2P98153 550 aa12.37□□□□□ -0.43
LMX1B-204ENST00000561065 CTF1Q16619 201 aa12.37□□□□□ -0.43
LMX1B-204ENST00000561065 LPCAT3Q6P1A2 487 aa12.37□□□□□ -0.43
LMX1B-204ENST00000561065 MFSD4AQ8N468 514 aa12.37□□□□□ -0.43
LMX1B-204ENST00000561065 OR5H2Q8NGV7 314 aa12.37□□□□□ -0.43
LMX1B-204ENST00000561065 OR6F1Q8NGZ6 308 aa12.37□□□□□ -0.43
LMX1B-204ENST00000561065 RAB2BQ8WUD1 216 aa12.37□□□□□ -0.43
LMX1B-204ENST00000561065 SECTM1Q8WVN6 248 aa12.37□□□□□ -0.43
LMX1B-204ENST00000561065 SLC5A7Q9GZV3 580 aa12.37□□□□□ -0.43
LMX1B-204ENST00000561065 A0A0G2JLM5 398 aa12.36□□□□□ -0.43
LMX1B-204ENST00000561065 RPL5P46777 297 aaKnown RBP12.36□□□□□ -0.43
LMX1B-204ENST00000561065 ALDH3B2P48448 385 aa12.36□□□□□ -0.43
LMX1B-204ENST00000561065 TSPAN5P62079 268 aa12.36□□□□□ -0.43
LMX1B-204ENST00000561065 ZNF616Q08AN1 781 aa12.36□□□□□ -0.43
LMX1B-204ENST00000561065 C9orf66Q5T8R8 295 aa12.36□□□□□ -0.43
LMX1B-204ENST00000561065 DHRS11Q6UWP2 260 aa12.36□□□□□ -0.43
LMX1B-204ENST00000561065 OVCH2Q7RTZ1 564 aa12.36□□□□□ -0.43
LMX1B-204ENST00000561065 MMD2Q8IY49 270 aa12.36□□□□□ -0.43
LMX1B-204ENST00000561065 CMTM1Q8IZ96 169 aa12.36□□□□□ -0.43
LMX1B-204ENST00000561065 LFNGQ8NES3 379 aa12.36□□□□□ -0.43
LMX1B-204ENST00000561065 TCTEX1D2Q8WW35 142 aa12.36□□□□□ -0.43
LMX1B-204ENST00000561065 DDB2Q92466 427 aa12.36□□□□□ -0.43
LMX1B-204ENST00000561065 PRR25Q96S07 402 aa12.36□□□□□ -0.43
LMX1B-204ENST00000561065 B9D2Q9BPU9 175 aa12.36□□□□□ -0.43
LMX1B-204ENST00000561065 ZNF355PQ9NSJ1 428 aa12.36□□□□□ -0.43
LMX1B-204ENST00000561065 EHFQ9NZC4 300 aa12.36□□□□□ -0.43
LMX1B-204ENST00000561065 RABL2AQ9UBK7 228 aaPredicted RBP12.36□□□□□ -0.43
LMX1B-204ENST00000561065 RABL2BQ9UNT1 228 aa12.36□□□□□ -0.43
LMX1B-204ENST00000561065 H3BUA1 57 aa12.35□□□□□ -0.43
LMX1B-204ENST00000561065 IGLV2-23P01705 113 aa12.35□□□□□ -0.43
LMX1B-204ENST00000561065 AADACP22760 399 aa12.35□□□□□ -0.43
LMX1B-204ENST00000561065 TMBIM6P55061 237 aa12.35□□□□□ -0.43
LMX1B-204ENST00000561065 DYRK1AQ13627 763 aa12.35□□□□□ -0.43
LMX1B-204ENST00000561065 TMEM17Q86X19 198 aa12.35□□□□□ -0.43
LMX1B-204ENST00000561065 OR1N2Q8NGR9 330 aa12.35□□□□□ -0.43
LMX1B-204ENST00000561065 GRPEL2Q8TAA5 225 aa12.35□□□□□ -0.43
LMX1B-204ENST00000561065 PHB2Q99623 299 aa12.35□□□□□ -0.43
LMX1B-204ENST00000561065 SPIN2AQ99865 258 aa12.35□□□□□ -0.43
LMX1B-204ENST00000561065 SPIN2BQ9BPZ2 258 aa12.35□□□□□ -0.43
LMX1B-204ENST00000561065 LINC00473A8K010 186 aa12.34□□□□□ -0.43
LMX1B-204ENST00000561065 MPPED1O15442 326 aa12.34□□□□□ -0.43
LMX1B-204ENST00000561065 EIF4EP06730 217 aaKnown RBP12.34□□□□□ -0.43
LMX1B-204ENST00000561065 OR8U8P0C7N1 319 aa12.34□□□□□ -0.43
LMX1B-204ENST00000561065 NAT1P18440 290 aa12.34□□□□□ -0.43
LMX1B-204ENST00000561065 SLURP1P55000 103 aa12.34□□□□□ -0.43
LMX1B-204ENST00000561065 SLC25A42Q86VD7 318 aa12.34□□□□□ -0.43
LMX1B-204ENST00000561065 CLVS1Q8IUQ0 354 aaPredicted RBP12.34□□□□□ -0.43
LMX1B-204ENST00000561065 TAS2R8Q9NYW2 309 aa12.34□□□□□ -0.43
LMX1B-204ENST00000561065 LSM4Q9Y4Z0 139 aaKnown RBP12.34□□□□□ -0.43
LMX1B-204ENST00000561065 DNAH7Q8WXX0 4024 aa12.33□□□□□ -0.44
LMX1B-204ENST00000561065 IGHV4OR15-8A0A075B7B6 117 aa12.33□□□□□ -0.44
LMX1B-204ENST00000561065 A0A087WW49 117 aa12.33□□□□□ -0.44
LMX1B-204ENST00000561065 IGKV1D-13A0A0B4J2D9 117 aa12.33□□□□□ -0.44
LMX1B-204ENST00000561065 MEIS3P1A6NDR6 274 aa12.33□□□□□ -0.44
LMX1B-204ENST00000561065 RGS5O15539 181 aa12.33□□□□□ -0.44
LMX1B-204ENST00000561065 RBFOX2O43251 390 aaKnown RBP eCLIP12.33□□□□□ -0.44
LMX1B-204ENST00000561065 HPGDSO60760 199 aa12.33□□□□□ -0.44
LMX1B-204ENST00000561065 IFNA6P05013 189 aa12.33□□□□□ -0.44
LMX1B-204ENST00000561065 CRYGBP07316 175 aa12.33□□□□□ -0.44
LMX1B-204ENST00000561065 LGALS1P09382 135 aaKnown RBP12.33□□□□□ -0.44
LMX1B-204ENST00000561065 IGKV1-13P0DP09 117 aa12.33□□□□□ -0.44
LMX1B-204ENST00000561065 ELK1P19419 428 aa12.33□□□□□ -0.44
LMX1B-204ENST00000561065 RCVRNP35243 200 aa12.33□□□□□ -0.44
LMX1B-204ENST00000561065 MAS1LP35410 378 aa12.33□□□□□ -0.44
LMX1B-204ENST00000561065 FXYD4P59646 89 aa12.33□□□□□ -0.44
LMX1B-204ENST00000561065 CD69Q07108 199 aa12.33□□□□□ -0.44
LMX1B-204ENST00000561065 PJVKQ0ZLH3 352 aa12.33□□□□□ -0.44
LMX1B-204ENST00000561065 PRSS8Q16651 343 aa12.33□□□□□ -0.44
LMX1B-204ENST00000561065 SNX29P2Q8IUI4 249 aa12.33□□□□□ -0.44
LMX1B-204ENST00000561065 GPX8Q8TED1 209 aa12.33□□□□□ -0.44
LMX1B-204ENST00000561065 DCUN1D4Q92564 292 aa12.33□□□□□ -0.44
LMX1B-204ENST00000561065 SNAPC3Q92966 411 aa12.33□□□□□ -0.44
LMX1B-204ENST00000561065 CCL28Q9NRJ3 127 aa12.33□□□□□ -0.44
LMX1B-204ENST00000561065 TNCP24821 2201 aa12.32□□□□□ -0.44
LMX1B-204ENST00000561065 C13orf42A0A1B0GVH6 325 aa12.32□□□□□ -0.44
LMX1B-204ENST00000561065 RAMP3O60896 148 aa12.32□□□□□ -0.44
LMX1B-204ENST00000561065 OR2A4O95047 310 aa12.32□□□□□ -0.44
LMX1B-204ENST00000561065 IGHV3-11P01762 117 aa12.32□□□□□ -0.44
LMX1B-204ENST00000561065 PMP2P02689 132 aa12.32□□□□□ -0.44
LMX1B-204ENST00000561065 FCER2P06734 321 aa12.32□□□□□ -0.44
LMX1B-204ENST00000561065 PTHLHP12272 177 aa12.32□□□□□ -0.44
LMX1B-204ENST00000561065 ECI1P42126 302 aa12.32□□□□□ -0.44
LMX1B-204ENST00000561065 RFX2P48378 723 aa12.32□□□□□ -0.44
LMX1B-204ENST00000561065 MRPS10P82664 201 aaKnown RBP12.32□□□□□ -0.44
LMX1B-204ENST00000561065 DCTN2Q13561 401 aaKnown RBP12.32□□□□□ -0.44
LMX1B-204ENST00000561065 TNXAQ16473 311 aa12.32□□□□□ -0.44
LMX1B-204ENST00000561065 MRGPRG-AS1Q2M3A8 158 aa12.32□□□□□ -0.44
LMX1B-204ENST00000561065 VAX1Q5SQQ9 334 aa12.32□□□□□ -0.44
LMX1B-204ENST00000561065 DLX4Q92988 240 aaPredicted RBP12.32□□□□□ -0.44
LMX1B-204ENST00000561065 OR2A7Q96R45 310 aa12.32□□□□□ -0.44
LMX1B-204ENST00000561065 ZNF2Q9BSG1 426 aaPredicted RBP12.32□□□□□ -0.44
LMX1B-204ENST00000561065 SORL1Q92673 2214 aa12.31□□□□□ -0.44
LMX1B-204ENST00000561065 SRRM4A7MD48 611 aaKnown RBP12.31□□□□□ -0.44
LMX1B-204ENST00000561065 BRI3O95415 125 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 189.3 ms