RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 ZNF462Q96JM2 2506 aa13.91□□□□□ -0.18
HDDC3-206ENST00000561036 LINC00862A6NCI5 91 aa13.91□□□□□ -0.18
HDDC3-206ENST00000561036 BUB1B-PAK6H3BSN5 160 aa13.91□□□□□ -0.18
HDDC3-206ENST00000561036 SCAF4O95104 1147 aaKnown RBP13.91□□□□□ -0.18
HDDC3-206ENST00000561036 IL6RP08887 468 aaPredicted RBP13.91□□□□□ -0.18
HDDC3-206ENST00000561036 SULT1A1P50225 295 aa13.91□□□□□ -0.18
HDDC3-206ENST00000561036 DSCR9P59020 149 aa13.91□□□□□ -0.18
HDDC3-206ENST00000561036 ARF6P62330 175 aa13.91□□□□□ -0.18
HDDC3-206ENST00000561036 RELBQ01201 579 aa13.91□□□□□ -0.18
HDDC3-206ENST00000561036 OR4A47Q6IF82 309 aa13.91□□□□□ -0.18
HDDC3-206ENST00000561036 SLC7A5P1Q8MH63 180 aa13.91□□□□□ -0.18
HDDC3-206ENST00000561036 STPG2Q8N412 459 aa13.91□□□□□ -0.18
HDDC3-206ENST00000561036 OR4C13Q8NGP0 309 aa13.91□□□□□ -0.18
HDDC3-206ENST00000561036 LRRC20Q8TCA0 184 aa13.91□□□□□ -0.18
HDDC3-206ENST00000561036 FAM168AQ92567 244 aa13.91□□□□□ -0.18
HDDC3-206ENST00000561036 LHX4Q969G2 390 aa13.91□□□□□ -0.18
HDDC3-206ENST00000561036 FOXA2Q9Y261 457 aaPredicted RBP13.91□□□□□ -0.18
HDDC3-206ENST00000561036 POLR3KQ9Y2Y1 108 aaPredicted RBP13.91□□□□□ -0.18
HDDC3-206ENST00000561036 WASHC3Q9Y3C0 194 aa13.91□□□□□ -0.18
HDDC3-206ENST00000561036 EPG5Q9HCE0 2579 aa13.91□□□□□ -0.18
HDDC3-206ENST00000561036 ZFYVE26Q68DK2 2539 aa13.91□□□□□ -0.18
HDDC3-206ENST00000561036 FOXH1O75593 365 aa13.9□□□□□ -0.18
HDDC3-206ENST00000561036 IAPPP10997 89 aa13.9□□□□□ -0.18
HDDC3-206ENST00000561036 ATP5J2P56134 94 aa13.9□□□□□ -0.18
HDDC3-206ENST00000561036 PAX2Q02962 417 aa13.9□□□□□ -0.18
HDDC3-206ENST00000561036 ZNF266Q14584 549 aa13.9□□□□□ -0.18
HDDC3-206ENST00000561036 CLEC2AQ6UVW9 174 aa13.9□□□□□ -0.18
HDDC3-206ENST00000561036 SSX9Q7RTT3 188 aa13.9□□□□□ -0.18
HDDC3-206ENST00000561036 DTD1Q8TEA8 209 aa13.9□□□□□ -0.18
HDDC3-206ENST00000561036 C10orf105Q8TEF2 133 aa13.9□□□□□ -0.18
HDDC3-206ENST00000561036 FLYWCH2Q96CP2 140 aaKnown RBP13.9□□□□□ -0.18
HDDC3-206ENST00000561036 BSCL2Q96G97 398 aaPredicted RBP13.9□□□□□ -0.18
HDDC3-206ENST00000561036 QTRT1Q9BXR0 403 aaKnown RBP13.9□□□□□ -0.18
HDDC3-206ENST00000561036 SMIM3Q9BZL3 60 aa13.9□□□□□ -0.18
HDDC3-206ENST00000561036 BET1LQ9NYM9 111 aa13.9□□□□□ -0.18
HDDC3-206ENST00000561036 PRNDQ9UKY0 176 aa13.9□□□□□ -0.18
HDDC3-206ENST00000561036 IGHV2-70DA0A0C4DH43 119 aa13.89□□□□□ -0.19
HDDC3-206ENST00000561036 C15orf61A6NNL5 157 aa13.89□□□□□ -0.19
HDDC3-206ENST00000561036 VWC2LB2RUY7 222 aa13.89□□□□□ -0.19
HDDC3-206ENST00000561036 LY6LH3BQJ8 138 aa13.89□□□□□ -0.19
HDDC3-206ENST00000561036 H7C2Y5 167 aa13.89□□□□□ -0.19
HDDC3-206ENST00000561036 UPK2O00526 184 aa13.89□□□□□ -0.19
HDDC3-206ENST00000561036 SHOXO15266 292 aa13.89□□□□□ -0.19
HDDC3-206ENST00000561036 IGKV1-16P04430 117 aa13.89□□□□□ -0.19
HDDC3-206ENST00000561036 COX7A1P24310 79 aa13.89□□□□□ -0.19
HDDC3-206ENST00000561036 ZFP36P26651 326 aaKnown RBP13.89□□□□□ -0.19
HDDC3-206ENST00000561036 VKORC1L1Q8N0U8 176 aa13.89□□□□□ -0.19
HDDC3-206ENST00000561036 PNKDQ8N490 385 aa13.89□□□□□ -0.19
HDDC3-206ENST00000561036 OR4P4Q8NGL7 312 aa13.89□□□□□ -0.19
HDDC3-206ENST00000561036 OR1S2Q8NGQ3 325 aa13.89□□□□□ -0.19
HDDC3-206ENST00000561036 OR4A5Q8NH83 315 aa13.89□□□□□ -0.19
HDDC3-206ENST00000561036 WFDC1Q9HC57 220 aa13.89□□□□□ -0.19
HDDC3-206ENST00000561036 TMEM14BQ9NUH8 114 aa13.89□□□□□ -0.19
HDDC3-206ENST00000561036 FKBP11Q9NYL4 201 aa13.89□□□□□ -0.19
HDDC3-206ENST00000561036 ARID1AO14497 2285 aa13.89□□□□□ -0.19
HDDC3-206ENST00000561036 A1L4Q6 167 aa13.88□□□□□ -0.19
HDDC3-206ENST00000561036 CEBPZOSA8MTT3 80 aa13.88□□□□□ -0.19
HDDC3-206ENST00000561036 DFFBO76075 338 aa13.88□□□□□ -0.19
HDDC3-206ENST00000561036 IFNA17P01571 189 aa13.88□□□□□ -0.19
HDDC3-206ENST00000561036 NMBP08949 121 aa13.88□□□□□ -0.19
HDDC3-206ENST00000561036 CEACAM3P40198 252 aa13.88□□□□□ -0.19
HDDC3-206ENST00000561036 REG1BP48304 166 aa13.88□□□□□ -0.19
HDDC3-206ENST00000561036 RPP30P78346 268 aaKnown RBP13.88□□□□□ -0.19
HDDC3-206ENST00000561036 CLEC9AQ6UXN8 241 aa13.88□□□□□ -0.19
HDDC3-206ENST00000561036 TMEM14EPQ6UXP3 125 aa13.88□□□□□ -0.19
HDDC3-206ENST00000561036 PDZD9Q8IXQ8 264 aa13.88□□□□□ -0.19
HDDC3-206ENST00000561036 PUSL1Q8N0Z8 303 aaKnown RBP13.88□□□□□ -0.19
HDDC3-206ENST00000561036 OR5C1Q8NGR4 320 aa13.88□□□□□ -0.19
HDDC3-206ENST00000561036 VSTM2AQ8TAG5 236 aa13.88□□□□□ -0.19
HDDC3-206ENST00000561036 CLCC1Q96S66 551 aa13.88□□□□□ -0.19
HDDC3-206ENST00000561036 GINS3Q9BRX5 216 aa13.88□□□□□ -0.19
HDDC3-206ENST00000561036 MED9Q9NWA0 146 aa13.88□□□□□ -0.19
HDDC3-206ENST00000561036 ZNF257Q9Y2Q1 563 aa13.88□□□□□ -0.19
HDDC3-206ENST00000561036 SMG1Q96Q15 3661 aaKnown RBP13.88□□□□□ -0.19
HDDC3-206ENST00000561036 ODF3BA8MYP8 253 aa13.87□□□□□ -0.19
HDDC3-206ENST00000561036 LEUTXA8MZ59 168 aa13.87□□□□□ -0.19
HDDC3-206ENST00000561036 CST7O76096 145 aa13.87□□□□□ -0.19
HDDC3-206ENST00000561036 FGF2P09038 288 aa13.87□□□□□ -0.19
HDDC3-206ENST00000561036 LGALS7P47929 136 aa13.87□□□□□ -0.19
HDDC3-206ENST00000561036 DYNLT3P51808 116 aa13.87□□□□□ -0.19
HDDC3-206ENST00000561036 OR2B8PP59922 312 aa13.87□□□□□ -0.19
HDDC3-206ENST00000561036 HSPE1P61604 102 aaKnown RBP13.87□□□□□ -0.19
HDDC3-206ENST00000561036 HBG1P69891 147 aa13.87□□□□□ -0.19
HDDC3-206ENST00000561036 HBG2P69892 147 aa13.87□□□□□ -0.19
HDDC3-206ENST00000561036 DIAPH2-AS1Q14236 149 aa13.87□□□□□ -0.19
HDDC3-206ENST00000561036 SPANXN5Q5MJ07 72 aa13.87□□□□□ -0.19
HDDC3-206ENST00000561036 RPEQ96AT9 228 aa13.87□□□□□ -0.19
HDDC3-206ENST00000561036 HARBI1Q96MB7 349 aa13.87□□□□□ -0.19
HDDC3-206ENST00000561036 TSNAXQ99598 290 aaKnown RBP13.87□□□□□ -0.19
HDDC3-206ENST00000561036 ATP5SQ99766 215 aa13.87□□□□□ -0.19
HDDC3-206ENST00000561036 NUP50Q9UKX7 468 aa13.87□□□□□ -0.19
HDDC3-206ENST00000561036 STRAPQ9Y3F4 350 aaKnown RBP13.87□□□□□ -0.19
HDDC3-206ENST00000561036 INSIG2Q9Y5U4 225 aa13.87□□□□□ -0.19
HDDC3-206ENST00000561036 AUP1Q9Y679 476 aa13.87□□□□□ -0.19
HDDC3-206ENST00000561036 USP9XQ93008 2570 aaPredicted RBP13.87□□□□□ -0.19
HDDC3-206ENST00000561036 TRAV3A0A0B4J244 114 aa13.86□□□□□ -0.19
HDDC3-206ENST00000561036 IGHV1-3A0A0C4DH29 117 aa13.86□□□□□ -0.19
HDDC3-206ENST00000561036 SRRM4A7MD48 611 aaKnown RBP13.86□□□□□ -0.19
HDDC3-206ENST00000561036 H3BP45 60 aa13.86□□□□□ -0.19
HDDC3-206ENST00000561036 ARG1P05089 322 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms