RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 OPN1MW2P0DN77 364 aa12.14□□□□□ -0.47
RABGGTA-219ENST00000560871 OPN1MW3P0DN78 364 aa12.14□□□□□ -0.47
RABGGTA-219ENST00000560871 EGR2P11161 476 aaPredicted RBP12.14□□□□□ -0.47
RABGGTA-219ENST00000560871 PJVKQ0ZLH3 352 aa12.14□□□□□ -0.47
RABGGTA-219ENST00000560871 NSUN5P1Q3KNT7 163 aa12.14□□□□□ -0.47
RABGGTA-219ENST00000560871 VMA21Q3ZAQ7 101 aa12.14□□□□□ -0.47
RABGGTA-219ENST00000560871 STEAP1BQ6NZ63 245 aa12.14□□□□□ -0.47
RABGGTA-219ENST00000560871 RNF152Q8N8N0 203 aa12.14□□□□□ -0.47
RABGGTA-219ENST00000560871 TEX45Q8NA69 505 aa12.14□□□□□ -0.47
RABGGTA-219ENST00000560871 RSRP1Q9BUV0 290 aa12.14□□□□□ -0.47
RABGGTA-219ENST00000560871 GON7Q9BXV9 100 aa12.14□□□□□ -0.47
RABGGTA-219ENST00000560871 TSSC4Q9Y5U2 329 aaPredicted RBP12.14□□□□□ -0.47
RABGGTA-219ENST00000560871 TCRBV4S1A1TA0A5B7 111 aa12.13□□□□□ -0.47
RABGGTA-219ENST00000560871 ANKRD20A5PA0PJZ0 165 aa12.13□□□□□ -0.47
RABGGTA-219ENST00000560871 GPR31O00270 319 aa12.13□□□□□ -0.47
RABGGTA-219ENST00000560871 PGLYRP1O75594 196 aaPredicted RBP12.13□□□□□ -0.47
RABGGTA-219ENST00000560871 RAB3DO95716 219 aa12.13□□□□□ -0.47
RABGGTA-219ENST00000560871 IGHG4P01861 327 aa12.13□□□□□ -0.47
RABGGTA-219ENST00000560871 S100A5P33763 92 aa12.13□□□□□ -0.47
RABGGTA-219ENST00000560871 FAAP20Q6NZ36 180 aa12.13□□□□□ -0.47
RABGGTA-219ENST00000560871 TEX38Q6PEX7 206 aa12.13□□□□□ -0.47
RABGGTA-219ENST00000560871 IDO2Q6ZQW0 420 aa12.13□□□□□ -0.47
RABGGTA-219ENST00000560871 SPAG16Q8N0X2 631 aa12.13□□□□□ -0.47
RABGGTA-219ENST00000560871 MINDY2Q8NBR6 621 aa12.13□□□□□ -0.47
RABGGTA-219ENST00000560871 OR6Q1Q8NGQ2 317 aa12.13□□□□□ -0.47
RABGGTA-219ENST00000560871 OR51H1Q8NH63 302 aa12.13□□□□□ -0.47
RABGGTA-219ENST00000560871 ARPC1AQ92747 370 aa12.13□□□□□ -0.47
RABGGTA-219ENST00000560871 TRIM63Q969Q1 353 aa12.13□□□□□ -0.47
RABGGTA-219ENST00000560871 MRGPRFQ96AM1 343 aa12.13□□□□□ -0.47
RABGGTA-219ENST00000560871 FAM103A1Q9BTL3 118 aaKnown RBP12.13□□□□□ -0.47
RABGGTA-219ENST00000560871 WSB1Q9Y6I7 421 aa12.13□□□□□ -0.47
RABGGTA-219ENST00000560871 PLXNB1O43157 2135 aa12.13□□□□□ -0.47
RABGGTA-219ENST00000560871 TRAV41A0A0B4J266 112 aa12.12□□□□□ -0.47
RABGGTA-219ENST00000560871 SOX15O60248 233 aa12.12□□□□□ -0.47
RABGGTA-219ENST00000560871 IGLV1-40P01703 118 aa12.12□□□□□ -0.47
RABGGTA-219ENST00000560871 IFNA6P05013 189 aa12.12□□□□□ -0.47
RABGGTA-219ENST00000560871 ELANEP08246 267 aa12.12□□□□□ -0.47
RABGGTA-219ENST00000560871 PSMB8P28062 276 aa12.12□□□□□ -0.47
RABGGTA-219ENST00000560871 ETV6P41212 452 aa12.12□□□□□ -0.47
RABGGTA-219ENST00000560871 RPL23AP62750 156 aaKnown RBP12.12□□□□□ -0.47
RABGGTA-219ENST00000560871 FOXE3Q13461 319 aa12.12□□□□□ -0.47
RABGGTA-219ENST00000560871 ECSCRQ19T08 205 aa12.12□□□□□ -0.47
RABGGTA-219ENST00000560871 CMTM1Q8IZ96 169 aa12.12□□□□□ -0.47
RABGGTA-219ENST00000560871 SLC38A6Q8IZM9 456 aa12.12□□□□□ -0.47
RABGGTA-219ENST00000560871 VKORC1L1Q8N0U8 176 aa12.12□□□□□ -0.47
RABGGTA-219ENST00000560871 PUSL1Q8N0Z8 303 aaKnown RBP12.12□□□□□ -0.47
RABGGTA-219ENST00000560871 OR4C16Q8NGL9 310 aa12.12□□□□□ -0.47
RABGGTA-219ENST00000560871 MYOZ3Q8TDC0 251 aa12.12□□□□□ -0.47
RABGGTA-219ENST00000560871 NUBP2Q9Y5Y2 271 aa12.12□□□□□ -0.47
RABGGTA-219ENST00000560871 HPRT1P00492 218 aa12.11□□□□□ -0.47
RABGGTA-219ENST00000560871 AKAIN1P0CW23 69 aa12.11□□□□□ -0.47
RABGGTA-219ENST00000560871 PTBP1P26599 531 aaKnown RBP eCLIP12.11□□□□□ -0.47
RABGGTA-219ENST00000560871 PPP5CP53041 499 aa12.11□□□□□ -0.47
RABGGTA-219ENST00000560871 FXYD3Q14802 87 aa12.11□□□□□ -0.47
RABGGTA-219ENST00000560871 MEF2DQ14814 521 aa12.11□□□□□ -0.47
RABGGTA-219ENST00000560871 POU2AF1Q16633 256 aa12.11□□□□□ -0.47
RABGGTA-219ENST00000560871 PRSS8Q16651 343 aa12.11□□□□□ -0.47
RABGGTA-219ENST00000560871 PHLDA2Q53GA4 152 aa12.11□□□□□ -0.47
RABGGTA-219ENST00000560871 LPCAT3Q6P1A2 487 aa12.11□□□□□ -0.47
RABGGTA-219ENST00000560871 LCNL1Q6ZST4 164 aa12.11□□□□□ -0.47
RABGGTA-219ENST00000560871 TCTEX1D1Q8N7M0 179 aa12.11□□□□□ -0.47
RABGGTA-219ENST00000560871 SLC2A9Q9NRM0 540 aa12.11□□□□□ -0.47
RABGGTA-219ENST00000560871 A0A1W2PN81 502 aa12.1□□□□□ -0.47
RABGGTA-219ENST00000560871 A0A1W2PRX2 142 aa12.1□□□□□ -0.47
RABGGTA-219ENST00000560871 KBTBD11O94819 623 aa12.1□□□□□ -0.47
RABGGTA-219ENST00000560871 S1PR2O95136 353 aa12.1□□□□□ -0.47
RABGGTA-219ENST00000560871 RPLP1P05386 114 aaKnown RBP12.1□□□□□ -0.47
RABGGTA-219ENST00000560871 F2RP25116 425 aa12.1□□□□□ -0.47
RABGGTA-219ENST00000560871 CHRNA7P36544 502 aa12.1□□□□□ -0.47
RABGGTA-219ENST00000560871 TAS2R31P59538 309 aa12.1□□□□□ -0.47
RABGGTA-219ENST00000560871 RND3P61587 244 aa12.1□□□□□ -0.47
RABGGTA-219ENST00000560871 AKIRIN2Q53H80 203 aa12.1□□□□□ -0.47
RABGGTA-219ENST00000560871 CXorf66Q5JRM2 361 aaPredicted RBP12.1□□□□□ -0.47
RABGGTA-219ENST00000560871 KHDC1LQ5JSQ8 128 aa12.1□□□□□ -0.47
RABGGTA-219ENST00000560871 ASPHD1Q5U4P2 390 aa12.1□□□□□ -0.47
RABGGTA-219ENST00000560871 C18orf65Q6ZTR6 163 aa12.1□□□□□ -0.47
RABGGTA-219ENST00000560871 LFNGQ8NES3 379 aa12.1□□□□□ -0.47
RABGGTA-219ENST00000560871 GRPEL2Q8TAA5 225 aa12.1□□□□□ -0.47
RABGGTA-219ENST00000560871 VSTM2AQ8TAG5 236 aa12.1□□□□□ -0.47
RABGGTA-219ENST00000560871 TMEM167AQ8TBQ9 72 aa12.1□□□□□ -0.47
RABGGTA-219ENST00000560871 CD300LFQ8TDQ1 290 aa12.1□□□□□ -0.47
RABGGTA-219ENST00000560871 ABHD5Q8WTS1 349 aa12.1□□□□□ -0.47
RABGGTA-219ENST00000560871 ZNF486Q96H40 463 aaPredicted RBP12.1□□□□□ -0.47
RABGGTA-219ENST00000560871 RHOVQ96L33 236 aa12.1□□□□□ -0.47
RABGGTA-219ENST00000560871 SRRQ9GZT4 340 aa12.1□□□□□ -0.47
RABGGTA-219ENST00000560871 ZNF430Q9H8G1 570 aaPredicted RBP12.1□□□□□ -0.47
RABGGTA-219ENST00000560871 PLEKHA2Q9HB19 425 aa12.1□□□□□ -0.47
RABGGTA-219ENST00000560871 ZFP57Q9NU63 452 aa12.1□□□□□ -0.47
RABGGTA-219ENST00000560871 SLC2A8Q9NY64 477 aa12.1□□□□□ -0.47
RABGGTA-219ENST00000560871 COMMD9Q9P000 198 aa12.1□□□□□ -0.47
RABGGTA-219ENST00000560871 FOXA2Q9Y261 457 aaPredicted RBP12.1□□□□□ -0.47
RABGGTA-219ENST00000560871 A6NHS1 94 aa12.09□□□□□ -0.47
RABGGTA-219ENST00000560871 CREBL2O60519 120 aaPredicted RBP12.09□□□□□ -0.47
RABGGTA-219ENST00000560871 OR2A4O95047 310 aa12.09□□□□□ -0.47
RABGGTA-219ENST00000560871 HRASP01112 189 aa12.09□□□□□ -0.47
RABGGTA-219ENST00000560871 IL6RP08887 468 aaPredicted RBP12.09□□□□□ -0.47
RABGGTA-219ENST00000560871 GNB1P62873 340 aa12.09□□□□□ -0.47
RABGGTA-219ENST00000560871 KLF9Q13886 244 aaPredicted RBP12.09□□□□□ -0.47
RABGGTA-219ENST00000560871 SCGB2B2Q4G0G5 96 aa12.09□□□□□ -0.47
RABGGTA-219ENST00000560871 ZNF585BQ52M93 769 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms