RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 TRAT1Q6PIZ9 186 aa7.22□□□□□ -1.25
CCDC33-209ENST00000560565 ZNF705AQ6ZN79 300 aaPredicted RBP7.22□□□□□ -1.25
CCDC33-209ENST00000560565 TEX43Q6ZNM6 134 aa7.22□□□□□ -1.25
CCDC33-209ENST00000560565 NUFIP2Q7Z417 695 aaKnown RBP7.22□□□□□ -1.25
CCDC33-209ENST00000560565 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.22□□□□□ -1.25
CCDC33-209ENST00000560565 OR5AU1Q8NGC0 362 aa7.22□□□□□ -1.25
CCDC33-209ENST00000560565 TMEM37Q8WXS4 190 aa7.22□□□□□ -1.25
CCDC33-209ENST00000560565 SDSLQ96GA7 329 aa7.22□□□□□ -1.25
CCDC33-209ENST00000560565 PSMG3-AS1Q96PY0 264 aa7.22□□□□□ -1.25
CCDC33-209ENST00000560565 RNF2Q99496 336 aa7.22□□□□□ -1.25
CCDC33-209ENST00000560565 PCGF1Q9BSM1 259 aa7.22□□□□□ -1.25
CCDC33-209ENST00000560565 RSG1Q9BU20 258 aa7.22□□□□□ -1.25
CCDC33-209ENST00000560565 SNHG12Q9BXW3 62 aa7.22□□□□□ -1.25
CCDC33-209ENST00000560565 HES7Q9BYE0 225 aa7.22□□□□□ -1.25
CCDC33-209ENST00000560565 GP6Q9HCN6 339 aa7.22□□□□□ -1.25
CCDC33-209ENST00000560565 CCL28Q9NRJ3 127 aa7.22□□□□□ -1.25
CCDC33-209ENST00000560565 HSPB7Q9UBY9 170 aa7.22□□□□□ -1.25
CCDC33-209ENST00000560565 IGKV3D-15A0A087WSY6 115 aa7.21□□□□□ -1.26
CCDC33-209ENST00000560565 TRGV5A0A0B4J1U4 118 aa7.21□□□□□ -1.26
CCDC33-209ENST00000560565 IGKV1-12A0A0C4DH73 117 aa7.21□□□□□ -1.26
CCDC33-209ENST00000560565 UBE2L5PA0A1B0GUS4 154 aa7.21□□□□□ -1.26
CCDC33-209ENST00000560565 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.21□□□□□ -1.26
CCDC33-209ENST00000560565 HS3ST1O14792 307 aa7.21□□□□□ -1.26
CCDC33-209ENST00000560565 TMEM50AO95807 157 aa7.21□□□□□ -1.26
CCDC33-209ENST00000560565 CLDN1O95832 211 aa7.21□□□□□ -1.26
CCDC33-209ENST00000560565 CXorf1O96002 111 aa7.21□□□□□ -1.26
CCDC33-209ENST00000560565 HPRT1P00492 218 aa7.21□□□□□ -1.26
CCDC33-209ENST00000560565 IGKV1D-12P01611 117 aa7.21□□□□□ -1.26
CCDC33-209ENST00000560565 IGHG3P01860 377 aa7.21□□□□□ -1.26
CCDC33-209ENST00000560565 ZNF32P17041 273 aa7.21□□□□□ -1.26
CCDC33-209ENST00000560565 MAGEA5P43359 124 aa7.21□□□□□ -1.26
CCDC33-209ENST00000560565 LHX2P50458 406 aa7.21□□□□□ -1.26
CCDC33-209ENST00000560565 GNG3P63215 75 aa7.21□□□□□ -1.26
CCDC33-209ENST00000560565 PMP22Q01453 160 aa7.21□□□□□ -1.26
CCDC33-209ENST00000560565 PLP2Q04941 152 aa7.21□□□□□ -1.26
CCDC33-209ENST00000560565 RSPO1Q2MKA7 263 aaPredicted RBP7.21□□□□□ -1.26
CCDC33-209ENST00000560565 SPANXN5Q5MJ07 72 aa7.21□□□□□ -1.26
CCDC33-209ENST00000560565 ZNF774Q6NX45 483 aa7.21□□□□□ -1.26
CCDC33-209ENST00000560565 GFRALQ6UXV0 394 aa7.21□□□□□ -1.26
CCDC33-209ENST00000560565 COLCA1Q6ZS62 124 aa7.21□□□□□ -1.26
CCDC33-209ENST00000560565 TMEM144Q7Z5S9 345 aa7.21□□□□□ -1.26
CCDC33-209ENST00000560565 WDFY1Q8IWB7 410 aa7.21□□□□□ -1.26
CCDC33-209ENST00000560565 OR4C12Q96R67 309 aa7.21□□□□□ -1.26
CCDC33-209ENST00000560565 REPIN1Q9BWE0 567 aaKnown RBP7.21□□□□□ -1.26
CCDC33-209ENST00000560565 SAMD10Q9BYL1 202 aa7.21□□□□□ -1.26
CCDC33-209ENST00000560565 RAB9BQ9NP90 201 aa7.21□□□□□ -1.26
CCDC33-209ENST00000560565 CDC42EP3Q9UKI2 254 aa7.21□□□□□ -1.26
CCDC33-209ENST00000560565 ZFP30Q9Y2G7 519 aa7.21□□□□□ -1.26
CCDC33-209ENST00000560565 WIPI2Q9Y4P8 454 aa7.21□□□□□ -1.26
CCDC33-209ENST00000560565 F8P00451 2351 aa7.21□□□□□ -1.26
CCDC33-209ENST00000560565 RTTNQ86VV8 2226 aa7.21□□□□□ -1.26
CCDC33-209ENST00000560565 CSMD1Q96PZ7 3565 aa7.2□□□□□ -1.26
CCDC33-209ENST00000560565 FAM221AA4D161 298 aa7.2□□□□□ -1.26
CCDC33-209ENST00000560565 KIAA1324LA8MWY0 1029 aaPredicted RBP7.2□□□□□ -1.26
CCDC33-209ENST00000560565 C9JCJ5 164 aa7.2□□□□□ -1.26
CCDC33-209ENST00000560565 E9PLN8 166 aa7.2□□□□□ -1.26
CCDC33-209ENST00000560565 RAB29O14966 203 aa7.2□□□□□ -1.26
CCDC33-209ENST00000560565 CXCL13O43927 109 aa7.2□□□□□ -1.26
CCDC33-209ENST00000560565 GLI4P10075 376 aa7.2□□□□□ -1.26
CCDC33-209ENST00000560565 PSG2P11465 335 aa7.2□□□□□ -1.26
CCDC33-209ENST00000560565 CRISP2P16562 243 aa7.2□□□□□ -1.26
CCDC33-209ENST00000560565 CD1BP29016 333 aa7.2□□□□□ -1.26
CCDC33-209ENST00000560565 ELLP55199 621 aaPredicted RBP7.2□□□□□ -1.26
CCDC33-209ENST00000560565 CLDN18P56856 261 aa7.2□□□□□ -1.26
CCDC33-209ENST00000560565 SUMO1P63165 101 aaKnown RBP7.2□□□□□ -1.26
CCDC33-209ENST00000560565 PSG4Q00888 419 aa7.2□□□□□ -1.26
CCDC33-209ENST00000560565 ZNF726P1Q15940 193 aa7.2□□□□□ -1.26
CCDC33-209ENST00000560565 PMCHL1Q16048 86 aa7.2□□□□□ -1.26
CCDC33-209ENST00000560565 KRTCAP3Q53RY4 240 aa7.2□□□□□ -1.26
CCDC33-209ENST00000560565 OR10J3Q5JRS4 329 aa7.2□□□□□ -1.26
CCDC33-209ENST00000560565 FFAR4Q5NUL3 377 aa7.2□□□□□ -1.26
CCDC33-209ENST00000560565 CDPF1Q6NVV7 123 aa7.2□□□□□ -1.26
CCDC33-209ENST00000560565 BRICD5Q6PL45 260 aa7.2□□□□□ -1.26
CCDC33-209ENST00000560565 C19orf35Q6ZS72 473 aa7.2□□□□□ -1.26
CCDC33-209ENST00000560565 SSX7Q7RTT5 188 aa7.2□□□□□ -1.26
CCDC33-209ENST00000560565 LINC01551Q86U37 167 aa7.2□□□□□ -1.26
CCDC33-209ENST00000560565 LSRQ86X29 649 aaPredicted RBP7.2□□□□□ -1.26
CCDC33-209ENST00000560565 ODF3L1Q8IXM7 274 aa7.2□□□□□ -1.26
CCDC33-209ENST00000560565 SIGLECL1Q8N7X8 197 aa7.2□□□□□ -1.26
CCDC33-209ENST00000560565 OR10G8Q8NGN5 311 aa7.2□□□□□ -1.26
CCDC33-209ENST00000560565 OR5B3Q8NH48 314 aa7.2□□□□□ -1.26
CCDC33-209ENST00000560565 OR10D3Q8NH80 312 aa7.2□□□□□ -1.26
CCDC33-209ENST00000560565 TMEM190Q8WZ59 177 aa7.2□□□□□ -1.26
CCDC33-209ENST00000560565 NINJ1Q92982 152 aa7.2□□□□□ -1.26
CCDC33-209ENST00000560565 SFRP2Q96HF1 295 aa7.2□□□□□ -1.26
CCDC33-209ENST00000560565 ZNF385AQ96PM9 386 aaKnown RBP7.2□□□□□ -1.26
CCDC33-209ENST00000560565 TBX15Q96SF7 602 aa7.2□□□□□ -1.26
CCDC33-209ENST00000560565 TMEM208Q9BTX3 173 aa7.2□□□□□ -1.26
CCDC33-209ENST00000560565 CHRDL1Q9BU40 450 aa7.2□□□□□ -1.26
CCDC33-209ENST00000560565 SRXN1Q9BYN0 137 aa7.2□□□□□ -1.26
CCDC33-209ENST00000560565 GAL3ST2Q9H3Q3 398 aa7.2□□□□□ -1.26
CCDC33-209ENST00000560565 UQCR10Q9UDW1 63 aa7.2□□□□□ -1.26
CCDC33-209ENST00000560565 ERRFI1Q9UJM3 462 aaPredicted RBP7.2□□□□□ -1.26
CCDC33-209ENST00000560565 TACC2O95359 2948 aa7.2□□□□□ -1.26
CCDC33-209ENST00000560565 HEATR1Q9H583 2144 aaKnown RBP7.19□□□□□ -1.26
CCDC33-209ENST00000560565 TRAV39A0A0B4J263 110 aa7.19□□□□□ -1.26
CCDC33-209ENST00000560565 ZNF716A6NP11 495 aa7.19□□□□□ -1.26
CCDC33-209ENST00000560565 J3QT63 122 aa7.19□□□□□ -1.26
CCDC33-209ENST00000560565 SLC33A1O00400 549 aaPredicted RBP7.19□□□□□ -1.26
CCDC33-209ENST00000560565 AQP7O14520 342 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms