RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 Q9N2K0 584 aa13.31□□□□□ -0.28
TSPAN3-208ENST00000560514 AK3Q9UIJ7 227 aa13.31□□□□□ -0.28
TSPAN3-208ENST00000560514 HECTD4Q9Y4D8 3996 aa13.31□□□□□ -0.28
TSPAN3-208ENST00000560514 ZNF320A2RRD8 509 aa13.3□□□□□ -0.28
TSPAN3-208ENST00000560514 ACTL6BO94805 426 aa13.3□□□□□ -0.28
TSPAN3-208ENST00000560514 HSMCR30P0CW71 290 aa13.3□□□□□ -0.28
TSPAN3-208ENST00000560514 CRHBPP24387 322 aa13.3□□□□□ -0.28
TSPAN3-208ENST00000560514 AQP4P55087 323 aa13.3□□□□□ -0.28
TSPAN3-208ENST00000560514 TAGLNQ01995 201 aaKnown RBP13.3□□□□□ -0.28
TSPAN3-208ENST00000560514 RTL8BQ17RB0 113 aa13.3□□□□□ -0.28
TSPAN3-208ENST00000560514 C2orf76Q3KRA6 126 aa13.3□□□□□ -0.28
TSPAN3-208ENST00000560514 OR56B1Q8NGI3 324 aa13.3□□□□□ -0.28
TSPAN3-208ENST00000560514 NRG4Q8WWG1 115 aa13.3□□□□□ -0.28
TSPAN3-208ENST00000560514 SRSF12Q8WXF0 261 aaKnown RBP13.3□□□□□ -0.28
TSPAN3-208ENST00000560514 CACNG8Q8WXS5 425 aa13.3□□□□□ -0.28
TSPAN3-208ENST00000560514 GFI1Q99684 422 aa13.3□□□□□ -0.28
TSPAN3-208ENST00000560514 MGLLQ99685 303 aa13.3□□□□□ -0.28
TSPAN3-208ENST00000560514 VCX3BQ9H321 246 aa13.3□□□□□ -0.28
TSPAN3-208ENST00000560514 C12orf4Q9NQ89 552 aa13.3□□□□□ -0.28
TSPAN3-208ENST00000560514 AK6Q9Y3D8 172 aaKnown RBP13.3□□□□□ -0.28
TSPAN3-208ENST00000560514 V9GY05 133 aa13.3□□□□□ -0.28
TSPAN3-208ENST00000560514 UBE2CO00762 179 aa13.29□□□□□ -0.28
TSPAN3-208ENST00000560514 OR2C1O95371 312 aa13.29□□□□□ -0.28
TSPAN3-208ENST00000560514 HLA-AP01891 365 aaKnown RBP13.29□□□□□ -0.28
TSPAN3-208ENST00000560514 SERPINB10P48595 397 aa13.29□□□□□ -0.28
TSPAN3-208ENST00000560514 P2RY14Q15391 338 aa13.29□□□□□ -0.28
TSPAN3-208ENST00000560514 C15orf32Q32M92 178 aa13.29□□□□□ -0.28
TSPAN3-208ENST00000560514 FAM3DQ96BQ1 224 aa13.29□□□□□ -0.28
TSPAN3-208ENST00000560514 CENPOQ9BU64 300 aa13.29□□□□□ -0.28
TSPAN3-208ENST00000560514 RAB22AQ9UL26 194 aa13.29□□□□□ -0.28
TSPAN3-208ENST00000560514 TRBV9A0A0B4J1U6 114 aa13.28□□□□□ -0.28
TSPAN3-208ENST00000560514 TRDCB7Z8K6 153 aa13.28□□□□□ -0.28
TSPAN3-208ENST00000560514 ANKRD65E5RJM6 399 aa13.28□□□□□ -0.28
TSPAN3-208ENST00000560514 OR2J3O76001 311 aa13.28□□□□□ -0.28
TSPAN3-208ENST00000560514 DIRAS3O95661 229 aa13.28□□□□□ -0.28
TSPAN3-208ENST00000560514 SCTP09683 121 aa13.28□□□□□ -0.28
TSPAN3-208ENST00000560514 RPS25P62851 125 aaKnown RBP13.28□□□□□ -0.28
TSPAN3-208ENST00000560514 PRSS8Q16651 343 aa13.28□□□□□ -0.28
TSPAN3-208ENST00000560514 FAM106AQ4KMX7 169 aa13.28□□□□□ -0.28
TSPAN3-208ENST00000560514 TMEM177Q53S58 311 aa13.28□□□□□ -0.28
TSPAN3-208ENST00000560514 OR4A47Q6IF82 309 aa13.28□□□□□ -0.28
TSPAN3-208ENST00000560514 RBPMS2Q6ZRY4 209 aaKnown RBP13.28□□□□□ -0.28
TSPAN3-208ENST00000560514 SLC25A42Q86VD7 318 aa13.28□□□□□ -0.28
TSPAN3-208ENST00000560514 GPHB5Q86YW7 130 aa13.28□□□□□ -0.28
TSPAN3-208ENST00000560514 TEX45Q8NA69 505 aa13.28□□□□□ -0.28
TSPAN3-208ENST00000560514 OR1L6Q8NGR2 347 aa13.28□□□□□ -0.28
TSPAN3-208ENST00000560514 ARHGAP5-AS1Q96IT6 56 aa13.28□□□□□ -0.28
TSPAN3-208ENST00000560514 SPIN2AQ99865 258 aa13.28□□□□□ -0.28
TSPAN3-208ENST00000560514 SPIN2BQ9BPZ2 258 aa13.28□□□□□ -0.28
TSPAN3-208ENST00000560514 CMSS1Q9BQ75 279 aaKnown RBP13.28□□□□□ -0.28
TSPAN3-208ENST00000560514 PECRQ9BY49 303 aa13.28□□□□□ -0.28
TSPAN3-208ENST00000560514 KCNK15Q9H427 330 aa13.28□□□□□ -0.28
TSPAN3-208ENST00000560514 RDH8Q9NYR8 311 aa13.28□□□□□ -0.28
TSPAN3-208ENST00000560514 TRAV1-2A0A0B4J238 106 aa13.27□□□□□ -0.29
TSPAN3-208ENST00000560514 CREBL2O60519 120 aaPredicted RBP13.27□□□□□ -0.29
TSPAN3-208ENST00000560514 RRASP10301 218 aa13.27□□□□□ -0.29
TSPAN3-208ENST00000560514 CALRP27797 417 aaKnown RBP13.27□□□□□ -0.29
TSPAN3-208ENST00000560514 HSPA13P48723 471 aa13.27□□□□□ -0.29
TSPAN3-208ENST00000560514 FABP5Q01469 135 aa13.27□□□□□ -0.29
TSPAN3-208ENST00000560514 ZNF45Q02386 682 aa13.27□□□□□ -0.29
TSPAN3-208ENST00000560514 SLC38A6Q8IZM9 456 aa13.27□□□□□ -0.29
TSPAN3-208ENST00000560514 STPG3Q8N7X2 389 aa13.27□□□□□ -0.29
TSPAN3-208ENST00000560514 UXS1Q8NBZ7 420 aa13.27□□□□□ -0.29
TSPAN3-208ENST00000560514 OR4A4PQ8NGN8 299 aa13.27□□□□□ -0.29
TSPAN3-208ENST00000560514 CCDC90BQ9GZT6 254 aa13.27□□□□□ -0.29
TSPAN3-208ENST00000560514 OR2D2Q9H210 308 aa13.27□□□□□ -0.29
TSPAN3-208ENST00000560514 MLXQ9UH92 298 aa13.27□□□□□ -0.29
TSPAN3-208ENST00000560514 SRRM4A7MD48 611 aaKnown RBP13.26□□□□□ -0.29
TSPAN3-208ENST00000560514 PDCD5O14737 125 aa13.26□□□□□ -0.29
TSPAN3-208ENST00000560514 DENRO43583 198 aaKnown RBP13.26□□□□□ -0.29
TSPAN3-208ENST00000560514 IFNA4P05014 189 aa13.26□□□□□ -0.29
TSPAN3-208ENST00000560514 GALP22466 123 aa13.26□□□□□ -0.29
TSPAN3-208ENST00000560514 ARL3P36405 182 aa13.26□□□□□ -0.29
TSPAN3-208ENST00000560514 UBE2KP61086 200 aa13.26□□□□□ -0.29
TSPAN3-208ENST00000560514 BTNL8Q6UX41 500 aa13.26□□□□□ -0.29
TSPAN3-208ENST00000560514 IDO2Q6ZQW0 420 aa13.26□□□□□ -0.29
TSPAN3-208ENST00000560514 HDHD3Q9BSH5 251 aaPredicted RBP13.26□□□□□ -0.29
TSPAN3-208ENST00000560514 BLOC1S6Q9UL45 172 aa13.26□□□□□ -0.29
TSPAN3-208ENST00000560514 TRAV25A0A0B4J276 109 aa13.25□□□□□ -0.29
TSPAN3-208ENST00000560514 MRPS15P82914 257 aaKnown RBP13.25□□□□□ -0.29
TSPAN3-208ENST00000560514 TBCEQ15813 527 aaPredicted RBP13.25□□□□□ -0.29
TSPAN3-208ENST00000560514 PLAC9Q5JTB6 97 aa13.25□□□□□ -0.29
TSPAN3-208ENST00000560514 TTC9CQ8N5M4 171 aa13.25□□□□□ -0.29
TSPAN3-208ENST00000560514 RNF183Q96D59 192 aa13.25□□□□□ -0.29
TSPAN3-208ENST00000560514 SDHAF2Q9NX18 166 aa13.25□□□□□ -0.29
TSPAN3-208ENST00000560514 FBXL7Q9UJT9 491 aa13.25□□□□□ -0.29
TSPAN3-208ENST00000560514 RBM7Q9Y580 266 aaKnown RBP13.25□□□□□ -0.29
TSPAN3-208ENST00000560514 IGKV1-6A0A0C4DH72 117 aa13.24□□□□□ -0.29
TSPAN3-208ENST00000560514 TMEM213A2RRL7 107 aa13.24□□□□□ -0.29
TSPAN3-208ENST00000560514 DPPA5A6NC42 116 aa13.24□□□□□ -0.29
TSPAN3-208ENST00000560514 MRPS14O60783 128 aaKnown RBP13.24□□□□□ -0.29
TSPAN3-208ENST00000560514 CRYZL1O95825 349 aa13.24□□□□□ -0.29
TSPAN3-208ENST00000560514 IGHV3-23P01764 117 aa13.24□□□□□ -0.29
TSPAN3-208ENST00000560514 GSTT2P0CG29 244 aa13.24□□□□□ -0.29
TSPAN3-208ENST00000560514 GSTT2BP0CG30 244 aa13.24□□□□□ -0.29
TSPAN3-208ENST00000560514 MRGPRG-AS1Q2M3A8 158 aa13.24□□□□□ -0.29
TSPAN3-208ENST00000560514 CLEC19AQ6UXS0 136 aa13.24□□□□□ -0.29
TSPAN3-208ENST00000560514 ZNF367Q7RTV3 350 aa13.24□□□□□ -0.29
TSPAN3-208ENST00000560514 OR2C3Q8N628 320 aa13.24□□□□□ -0.29
TSPAN3-208ENST00000560514 RAB3CQ96E17 227 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms