RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 ZNF581Q9P0T4 197 aa10.76□□□□□ -0.69
SMAD3-214ENST00000560402 PIPOXQ9P0Z9 390 aa10.76□□□□□ -0.69
SMAD3-214ENST00000560402 FXYD6-FXYD2A0A087WZ82 144 aa10.75□□□□□ -0.69
SMAD3-214ENST00000560402 A0A1W2PPI3 338 aa10.75□□□□□ -0.69
SMAD3-214ENST00000560402 CRYM-AS1A6NIL9 109 aa10.75□□□□□ -0.69
SMAD3-214ENST00000560402 J3QR06 171 aa10.75□□□□□ -0.69
SMAD3-214ENST00000560402 K7EIL1 84 aa10.75□□□□□ -0.69
SMAD3-214ENST00000560402 BET1O15155 118 aa10.75□□□□□ -0.69
SMAD3-214ENST00000560402 SIX6O95475 246 aa10.75□□□□□ -0.69
SMAD3-214ENST00000560402 SNRNP70P08621 437 aaKnown RBP10.75□□□□□ -0.69
SMAD3-214ENST00000560402 NFYAP23511 347 aaPredicted RBP10.75□□□□□ -0.69
SMAD3-214ENST00000560402 H2BFSP57053 126 aa10.75□□□□□ -0.69
SMAD3-214ENST00000560402 PIGPP57054 158 aa10.75□□□□□ -0.69
SMAD3-214ENST00000560402 EGFEM1PQ0D2K5 195 aa10.75□□□□□ -0.69
SMAD3-214ENST00000560402 C6orf183Q5T699 404 aa10.75□□□□□ -0.69
SMAD3-214ENST00000560402 ZNF880Q6PDB4 577 aa10.75□□□□□ -0.69
SMAD3-214ENST00000560402 ZNF497Q6ZNH5 498 aa10.75□□□□□ -0.69
SMAD3-214ENST00000560402 CMTM1Q8IZ96 169 aa10.75□□□□□ -0.69
SMAD3-214ENST00000560402 COMMD1Q8N668 190 aa10.75□□□□□ -0.69
SMAD3-214ENST00000560402 LINC00482Q8N8I6 264 aa10.75□□□□□ -0.69
SMAD3-214ENST00000560402 OR13A1Q8NGR1 328 aa10.75□□□□□ -0.69
SMAD3-214ENST00000560402 MCRIP2Q9BUT9 160 aaKnown RBP10.75□□□□□ -0.69
SMAD3-214ENST00000560402 FXYD6Q9H0Q3 95 aa10.75□□□□□ -0.69
SMAD3-214ENST00000560402 NAA60Q9H7X0 242 aa10.75□□□□□ -0.69
SMAD3-214ENST00000560402 KIF25Q9UIL4 384 aa10.75□□□□□ -0.69
SMAD3-214ENST00000560402 NPIPB11E5RHQ5 1161 aa10.74□□□□□ -0.69
SMAD3-214ENST00000560402 HSPA12AO43301 675 aa10.74□□□□□ -0.69
SMAD3-214ENST00000560402 TSC22D2O75157 780 aa10.74□□□□□ -0.69
SMAD3-214ENST00000560402 B3GALNT1O75752 331 aa10.74□□□□□ -0.69
SMAD3-214ENST00000560402 TMEM11P17152 192 aa10.74□□□□□ -0.69
SMAD3-214ENST00000560402 PI3P19957 117 aa10.74□□□□□ -0.69
SMAD3-214ENST00000560402 AADACP22760 399 aa10.74□□□□□ -0.69
SMAD3-214ENST00000560402 NUP62P37198 522 aaPredicted RBP10.74□□□□□ -0.69
SMAD3-214ENST00000560402 RPL23AP62750 156 aaKnown RBP10.74□□□□□ -0.69
SMAD3-214ENST00000560402 HES1Q14469 280 aa10.74□□□□□ -0.69
SMAD3-214ENST00000560402 LGI3Q8N145 548 aa10.74□□□□□ -0.69
SMAD3-214ENST00000560402 C5orf56Q8N8D9 126 aa10.74□□□□□ -0.69
SMAD3-214ENST00000560402 RTN4IP1Q8WWV3 396 aaPredicted RBP10.74□□□□□ -0.69
SMAD3-214ENST00000560402 TMEM230Q96A57 120 aa10.74□□□□□ -0.69
SMAD3-214ENST00000560402 CABLES2Q9BTV7 478 aa10.74□□□□□ -0.69
SMAD3-214ENST00000560402 RSRP1Q9BUV0 290 aa10.74□□□□□ -0.69
SMAD3-214ENST00000560402 NMES1Q9C002 83 aa10.74□□□□□ -0.69
SMAD3-214ENST00000560402 ZFP57Q9NU63 452 aa10.74□□□□□ -0.69
SMAD3-214ENST00000560402 ZMAT5Q9UDW3 170 aaKnown RBP10.74□□□□□ -0.69
SMAD3-214ENST00000560402 COL7A1Q02388 2944 aa10.73□□□□□ -0.69
SMAD3-214ENST00000560402 C13orf42A0A1B0GVH6 325 aa10.73□□□□□ -0.69
SMAD3-214ENST00000560402 SH2D7A6NKC9 451 aaPredicted RBP10.73□□□□□ -0.69
SMAD3-214ENST00000560402 DBX1A6NMT0 343 aa10.73□□□□□ -0.69
SMAD3-214ENST00000560402 GPR31O00270 319 aa10.73□□□□□ -0.69
SMAD3-214ENST00000560402 IFNA7P01567 189 aa10.73□□□□□ -0.69
SMAD3-214ENST00000560402 RND3P61587 244 aa10.73□□□□□ -0.69
SMAD3-214ENST00000560402 SLC35B1P78383 322 aa10.73□□□□□ -0.69
SMAD3-214ENST00000560402 ZNF816Q0VGE8 651 aaPredicted RBP10.73□□□□□ -0.69
SMAD3-214ENST00000560402 C10orf99Q6UWK7 81 aa10.73□□□□□ -0.69
SMAD3-214ENST00000560402 ETV3LQ6ZN32 361 aa10.73□□□□□ -0.69
SMAD3-214ENST00000560402 FOXRED2Q8IWF2 684 aa10.73□□□□□ -0.69
SMAD3-214ENST00000560402 GAPTQ8N292 157 aa10.73□□□□□ -0.69
SMAD3-214ENST00000560402 GALNT14Q96FL9 552 aa10.73□□□□□ -0.69
SMAD3-214ENST00000560402 SLC5A7Q9GZV3 580 aa10.73□□□□□ -0.69
SMAD3-214ENST00000560402 SLC2A9Q9NRM0 540 aa10.73□□□□□ -0.69
SMAD3-214ENST00000560402 PLSCR3Q9NRY6 295 aa10.73□□□□□ -0.69
SMAD3-214ENST00000560402 PSG11Q9UQ72 335 aa10.73□□□□□ -0.69
SMAD3-214ENST00000560402 A0A0D9SG52 128 aa10.72□□□□□ -0.69
SMAD3-214ENST00000560402 HSD17B6O14756 317 aa10.72□□□□□ -0.69
SMAD3-214ENST00000560402 ARPC5O15511 151 aa10.72□□□□□ -0.69
SMAD3-214ENST00000560402 IGHG2P01859 326 aa10.72□□□□□ -0.69
SMAD3-214ENST00000560402 SCTP09683 121 aa10.72□□□□□ -0.69
SMAD3-214ENST00000560402 SLC25A4P12235 298 aa10.72□□□□□ -0.69
SMAD3-214ENST00000560402 RPA2P15927 270 aa10.72□□□□□ -0.69
SMAD3-214ENST00000560402 THBS3P49746 956 aa10.72□□□□□ -0.69
SMAD3-214ENST00000560402 SMCO1Q147U7 214 aa10.72□□□□□ -0.69
SMAD3-214ENST00000560402 IGSF11Q5DX21 431 aa10.72□□□□□ -0.69
SMAD3-214ENST00000560402 LY6G6FQ5SQ64 297 aa10.72□□□□□ -0.69
SMAD3-214ENST00000560402 TMEM65Q6PI78 240 aa10.72□□□□□ -0.69
SMAD3-214ENST00000560402 MRPL41Q8IXM3 137 aaKnown RBP10.72□□□□□ -0.69
SMAD3-214ENST00000560402 DRAM1Q8N682 238 aa10.72□□□□□ -0.69
SMAD3-214ENST00000560402 INO80EQ8NBZ0 244 aaPredicted RBP10.72□□□□□ -0.69
SMAD3-214ENST00000560402 OR11H4Q8NGC9 324 aa10.72□□□□□ -0.69
SMAD3-214ENST00000560402 OR10X1Q8NGY0 326 aa10.72□□□□□ -0.69
SMAD3-214ENST00000560402 PLPPR1Q8TBJ4 325 aa10.72□□□□□ -0.69
SMAD3-214ENST00000560402 MRGPRDQ8TDS7 321 aa10.72□□□□□ -0.69
SMAD3-214ENST00000560402 SECTM1Q8WVN6 248 aa10.72□□□□□ -0.69
SMAD3-214ENST00000560402 C2orf50Q96LR7 162 aa10.72□□□□□ -0.69
SMAD3-214ENST00000560402 BOLA1Q9Y3E2 137 aa10.72□□□□□ -0.69
SMAD3-214ENST00000560402 RBM7Q9Y580 266 aaKnown RBP10.72□□□□□ -0.69
SMAD3-214ENST00000560402 KMT2CQ8NEZ4 4911 aaKnown RBP10.71□□□□□ -0.69
SMAD3-214ENST00000560402 TRBV6-7A0A0A0MS04 114 aa10.71□□□□□ -0.69
SMAD3-214ENST00000560402 CCSO14618 274 aa10.71□□□□□ -0.69
SMAD3-214ENST00000560402 TUSC2O75896 110 aa10.71□□□□□ -0.69
SMAD3-214ENST00000560402 IL3RAP26951 378 aa10.71□□□□□ -0.69
SMAD3-214ENST00000560402 PSMB6P28072 239 aa10.71□□□□□ -0.69
SMAD3-214ENST00000560402 S100A11P31949 105 aa10.71□□□□□ -0.69
SMAD3-214ENST00000560402 SSTR5P35346 364 aa10.71□□□□□ -0.69
SMAD3-214ENST00000560402 MYCNOSP40205 109 aa10.71□□□□□ -0.69
SMAD3-214ENST00000560402 GNG10P50151 68 aa10.71□□□□□ -0.69
SMAD3-214ENST00000560402 LUMP51884 338 aaPredicted RBP10.71□□□□□ -0.69
SMAD3-214ENST00000560402 KRTAP10-11P60412 298 aa10.71□□□□□ -0.69
SMAD3-214ENST00000560402 SUPT4H1P63272 117 aaKnown RBP10.71□□□□□ -0.69
SMAD3-214ENST00000560402 IFITM2Q01629 132 aa10.71□□□□□ -0.69
SMAD3-214ENST00000560402 EBI3Q14213 229 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms