RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 C1orf162Q8NEQ5 155 aaPredicted RBP11.52□□□□□ -0.57
TRAF3-208ENST00000560371 ATP6V0CP27449 155 aa11.52□□□□□ -0.57
TRAF3-208ENST00000560371 MAP1LC3CQ9BXW4 147 aa11.52□□□□□ -0.57
TRAF3-208ENST00000560371 J3QW42 95 aa11.52□□□□□ -0.57
TRAF3-208ENST00000560371 MUC1P15941 1255 aaPredicted RBP11.52□□□□□ -0.57
TRAF3-208ENST00000560371 GLIPR1P48060 266 aa11.52□□□□□ -0.57
TRAF3-208ENST00000560371 LCN2P80188 198 aa11.52□□□□□ -0.57
TRAF3-208ENST00000560371 FOXC2Q99958 501 aa11.52□□□□□ -0.57
TRAF3-208ENST00000560371 MARCH11A6NNE9 402 aa11.52□□□□□ -0.57
TRAF3-208ENST00000560371 IGHMP01871 453 aa11.52□□□□□ -0.57
TRAF3-208ENST00000560371 UNC119Q13432 240 aa11.52□□□□□ -0.57
TRAF3-208ENST00000560371 TMEM106BQ9NUM4 274 aa11.52□□□□□ -0.57
TRAF3-208ENST00000560371 TRAV30A0A087WSZ9 112 aa11.51□□□□□ -0.57
TRAF3-208ENST00000560371 TRBV5-5A0A0J9YX44 114 aa11.51□□□□□ -0.57
TRAF3-208ENST00000560371 B4DEV8 164 aa11.51□□□□□ -0.57
TRAF3-208ENST00000560371 ZIC3O60481 467 aa11.51□□□□□ -0.57
TRAF3-208ENST00000560371 MRPL54Q6P161 138 aaKnown RBP11.51□□□□□ -0.57
TRAF3-208ENST00000560371 SYT8Q8NBV8 401 aa11.51□□□□□ -0.57
TRAF3-208ENST00000560371 TMEM54Q969K7 222 aa11.51□□□□□ -0.57
TRAF3-208ENST00000560371 SCMH1Q96GD3 660 aa11.51□□□□□ -0.57
TRAF3-208ENST00000560371 JPT1Q9UK76 154 aa11.51□□□□□ -0.57
TRAF3-208ENST00000560371 RPLP1P05386 114 aaKnown RBP11.51□□□□□ -0.57
TRAF3-208ENST00000560371 OR10J1P30954 320 aa11.51□□□□□ -0.57
TRAF3-208ENST00000560371 IMMP1LQ96LU5 166 aa11.51□□□□□ -0.57
TRAF3-208ENST00000560371 TMEM222Q9H0R3 208 aa11.51□□□□□ -0.57
TRAF3-208ENST00000560371 TLNRD1Q9H1K6 362 aa11.51□□□□□ -0.57
TRAF3-208ENST00000560371 LTBP1Q14766 1721 aa11.51□□□□□ -0.57
TRAF3-208ENST00000560371 MEGF10Q96KG7 1140 aa11.51□□□□□ -0.57
TRAF3-208ENST00000560371 IGKV1D-42A0A075B6H8 117 aa11.51□□□□□ -0.57
TRAF3-208ENST00000560371 LOC389332A0A1B0GUA5 103 aa11.51□□□□□ -0.57
TRAF3-208ENST00000560371 C17orf51A8MQB3 221 aa11.51□□□□□ -0.57
TRAF3-208ENST00000560371 REG1AP05451 166 aa11.51□□□□□ -0.57
TRAF3-208ENST00000560371 CACNG7P62955 275 aa11.51□□□□□ -0.57
TRAF3-208ENST00000560371 TMEM183BQ1AE95 376 aa11.51□□□□□ -0.57
TRAF3-208ENST00000560371 ZNF880Q6PDB4 577 aa11.51□□□□□ -0.57
TRAF3-208ENST00000560371 ZNF324O75467 553 aaPredicted RBP11.51□□□□□ -0.57
TRAF3-208ENST00000560371 DEDDO75618 318 aa11.51□□□□□ -0.57
TRAF3-208ENST00000560371 SSTR5P35346 364 aa11.51□□□□□ -0.57
TRAF3-208ENST00000560371 RNASE6Q93091 150 aaKnown RBP11.51□□□□□ -0.57
TRAF3-208ENST00000560371 FAM74A7A6NL05 159 aa11.51□□□□□ -0.57
TRAF3-208ENST00000560371 MMP9P14780 707 aa11.51□□□□□ -0.57
TRAF3-208ENST00000560371 LY6DQ14210 128 aa11.51□□□□□ -0.57
TRAF3-208ENST00000560371 C10orf128Q5T292 105 aa11.51□□□□□ -0.57
TRAF3-208ENST00000560371 AMMECR1LQ6DCA0 310 aa11.51□□□□□ -0.57
TRAF3-208ENST00000560371 OR10D4PQ8NGN7 298 aa11.51□□□□□ -0.57
TRAF3-208ENST00000560371 OR11H7Q8NGC8 314 aa11.5□□□□□ -0.57
TRAF3-208ENST00000560371 MYO18BQ8IUG5 2567 aa11.5□□□□□ -0.57
TRAF3-208ENST00000560371 TGFAP01135 160 aa11.5□□□□□ -0.57
TRAF3-208ENST00000560371 RELQ04864 619 aaPredicted RBP11.5□□□□□ -0.57
TRAF3-208ENST00000560371 RSG1Q9BU20 258 aa11.5□□□□□ -0.57
TRAF3-208ENST00000560371 THY1P04216 161 aa11.5□□□□□ -0.57
TRAF3-208ENST00000560371 GCM2O75603 506 aaPredicted RBP11.5□□□□□ -0.57
TRAF3-208ENST00000560371 CFDP00746 253 aaPredicted RBP11.5□□□□□ -0.57
TRAF3-208ENST00000560371 PRSS8Q16651 343 aa11.5□□□□□ -0.57
TRAF3-208ENST00000560371 C12orf57Q99622 126 aa11.5□□□□□ -0.57
TRAF3-208ENST00000560371 HIST1H1BP16401 226 aaKnown RBP11.5□□□□□ -0.57
TRAF3-208ENST00000560371 CLDN18P56856 261 aa11.5□□□□□ -0.57
TRAF3-208ENST00000560371 HSPE1P61604 102 aaKnown RBP11.5□□□□□ -0.57
TRAF3-208ENST00000560371 FXYD3Q14802 87 aa11.5□□□□□ -0.57
TRAF3-208ENST00000560371 LGALSLQ3ZCW2 172 aaPredicted RBP11.5□□□□□ -0.57
TRAF3-208ENST00000560371 TUBA4BQ9H853 241 aa11.5□□□□□ -0.57
TRAF3-208ENST00000560371 HSPB8Q9UJY1 196 aa11.5□□□□□ -0.57
TRAF3-208ENST00000560371 PHLDA3Q9Y5J5 127 aa11.5□□□□□ -0.57
TRAF3-208ENST00000560371 A8MWL6 223 aa11.5□□□□□ -0.57
TRAF3-208ENST00000560371 SPACA3Q8IXA5 215 aa11.5□□□□□ -0.57
TRAF3-208ENST00000560371 MRPL30Q8TCC3 161 aaKnown RBP11.5□□□□□ -0.57
TRAF3-208ENST00000560371 RBKSQ9H477 322 aa11.5□□□□□ -0.57
TRAF3-208ENST00000560371 KLF7O75840 302 aaPredicted RBP11.49□□□□□ -0.57
TRAF3-208ENST00000560371 SEC11BP0C7V7 166 aa11.49□□□□□ -0.57
TRAF3-208ENST00000560371 EEF1AKMT3Q96AZ1 226 aa11.49□□□□□ -0.57
TRAF3-208ENST00000560371 GPHA2Q96T91 129 aa11.49□□□□□ -0.57
TRAF3-208ENST00000560371 ALX4Q9H161 411 aaPredicted RBP11.49□□□□□ -0.57
TRAF3-208ENST00000560371 ZSWIM8A7E2V4 1837 aa11.49□□□□□ -0.57
TRAF3-208ENST00000560371 PLA2G10O15496 165 aa11.49□□□□□ -0.57
TRAF3-208ENST00000560371 PGLYRP1O75594 196 aaPredicted RBP11.49□□□□□ -0.57
TRAF3-208ENST00000560371 RND2P52198 227 aa11.49□□□□□ -0.57
TRAF3-208ENST00000560371 SNRPD3P62318 126 aaKnown RBP11.49□□□□□ -0.57
TRAF3-208ENST00000560371 DLK1P80370 383 aa11.49□□□□□ -0.57
TRAF3-208ENST00000560371 EGR4Q05215 589 aa11.49□□□□□ -0.57
TRAF3-208ENST00000560371 DPPA3Q6W0C5 159 aa11.49□□□□□ -0.57
TRAF3-208ENST00000560371 TMEM45BQ96B21 275 aa11.49□□□□□ -0.57
TRAF3-208ENST00000560371 ZNF430Q9H8G1 570 aaPredicted RBP11.49□□□□□ -0.57
TRAF3-208ENST00000560371 AURKAIP1Q9NWT8 199 aaPredicted RBP11.49□□□□□ -0.57
TRAF3-208ENST00000560371 A0A0G2JMM0 328 aa11.49□□□□□ -0.57
TRAF3-208ENST00000560371 A0A1W2PPB8 328 aa11.49□□□□□ -0.57
TRAF3-208ENST00000560371 A0A1W2PRS3 328 aa11.49□□□□□ -0.57
TRAF3-208ENST00000560371 KIR3DP1A8MWS1 328 aa11.49□□□□□ -0.57
TRAF3-208ENST00000560371 HLA-DQB1P01920 261 aa11.49□□□□□ -0.57
TRAF3-208ENST00000560371 LOC390937A0A1W2PQ73 354 aa11.49□□□□□ -0.57
TRAF3-208ENST00000560371 KLF4O43474 513 aa11.49□□□□□ -0.57
TRAF3-208ENST00000560371 CRYBA2P53672 197 aa11.49□□□□□ -0.57
TRAF3-208ENST00000560371 ELOBQ15370 118 aa11.49□□□□□ -0.57
TRAF3-208ENST00000560371 ZXDCQ2QGD7 858 aaPredicted RBP11.49□□□□□ -0.57
TRAF3-208ENST00000560371 C1orf100Q5SVJ3 147 aa11.49□□□□□ -0.57
TRAF3-208ENST00000560371 H1FOOQ8IZA3 346 aaPredicted RBP11.49□□□□□ -0.57
TRAF3-208ENST00000560371 OR8A1Q8NGG7 326 aa11.49□□□□□ -0.57
TRAF3-208ENST00000560371 VKORC1L1Q8N0U8 176 aa11.49□□□□□ -0.57
TRAF3-208ENST00000560371 RAB37Q96AX2 223 aa11.49□□□□□ -0.57
TRAF3-208ENST00000560371 RTN4RQ9BZR6 473 aa11.49□□□□□ -0.57
TRAF3-208ENST00000560371 NPPCP23582 126 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms