RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 PATE1Q8WXA2 126 aa4.99□□□□□ -1.61
SNRPA1-209ENST00000560307 PSMF1Q92530 271 aa4.99□□□□□ -1.61
SNRPA1-209ENST00000560307 APH1AQ96BI3 265 aa4.99□□□□□ -1.61
SNRPA1-209ENST00000560307 ALKBH3Q96Q83 286 aaPredicted RBP4.99□□□□□ -1.61
SNRPA1-209ENST00000560307 MEGF9Q9H1U4 602 aa4.99□□□□□ -1.61
SNRPA1-209ENST00000560307 SLC25A22Q9H936 323 aa4.99□□□□□ -1.61
SNRPA1-209ENST00000560307 CACNG5Q9UF02 275 aa4.99□□□□□ -1.61
SNRPA1-209ENST00000560307 TRGV11A0A075B6L2 103 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 TRGV10A0A0A0MS01 117 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 C5orf63A6NC05 138 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 PMS2P5A8MQ11 134 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 C17orf51A8MQB3 221 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 H3BP45 60 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 K7ERU9 68 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 SYNGR3O43761 229 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 EFNA2O43921 213 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 PRKNO60260 465 aaPredicted RBP4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 ZNF324O75467 553 aaPredicted RBP4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 OR7C1O76099 320 aaPredicted RBP4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 TNFSF15O95150 251 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 MT-CO2P00403 227 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 IGKV1-39P01597 117 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 HLA-DQA1P01909 254 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 IGKV1D-39P04432 117 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 ELANEP08246 267 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 CYC1P08574 325 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 IAPPP10997 89 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 PSG2P11465 335 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 HOXB2P14652 356 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 AREGP15514 252 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 NPPCP23582 126 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 GATA3P23771 443 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 GABRA2P47869 451 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 REG1BP48304 166 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 CLDN17P56750 224 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 TGFBR3Q03167 851 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 ZNF90Q03938 601 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 RPEL1Q2QD12 228 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 SNAI3Q3KNW1 292 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 STUMQ69YW2 141 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 PCSK4Q6UW60 755 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 Q6ZSR6 202 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 LRP11Q86VZ4 500 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 MKXQ8IYA7 352 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 MUC15Q8N387 334 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 FADS6Q8N9I5 356 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 Q8NA96 180 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 OR2M3Q8NG83 312 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 OR10P1Q8NGE3 313 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 OR1F12Q8NHA8 337 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 DYRK2Q92630 601 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 CLDN23Q96B33 292 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 SF3B5Q9BWJ5 86 aaKnown RBP4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 CSTL1Q9H114 145 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 NRN1Q9NPD7 142 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 SOHLH2Q9NX45 425 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 PLEK2Q9NYT0 353 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 CACNA1CQ13936 2221 aa4.98□□□□□ -1.61
SNRPA1-209ENST00000560307 TNRC6AQ8NDV7 1962 aaKnown RBP4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 KIAA1549Q9HCM3 1950 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 TRAV9-2A0A087WT02 112 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 SPTY2D1-AS1A0A0U1RR47 76 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 A0A1W2PQF6 199 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 GRIFINA4D1Z8 144 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 DPRXA6NFQ7 191 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 SNURFLB1AK76 121 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 C5orf67F2Z3F1 127 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 IFNL4K9M1U5 179 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 CDIPTO14735 213 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 RAB29O14966 203 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 WISP2O76076 250 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 CXorf1O96002 111 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 IGKV1-5P01602 117 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 HLA-DRB1P01911 266 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 SCTP09683 121 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 P0C879 139 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 TMEM11P17152 192 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 CEACAM8P31997 349 aaPredicted RBP4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 CEACAM3P40198 252 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 PTGDSP41222 190 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 AMTP48728 403 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 KRTDAPP60985 99 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 PCBD1P61457 104 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 ARG2P78540 354 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 DAZAP2Q15038 168 aaPredicted RBP4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 CLEC12BQ2HXU8 276 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 TDRG1Q3Y452 100 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 OCIAD2Q56VL3 154 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 SPANXN5Q5MJ07 72 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 CARD17Q5XLA6 110 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 PLCXD3Q63HM9 321 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 Q6ZRM9 215 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 C17orf82Q86X59 251 aaPredicted RBP4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 MCEMP1Q8IX19 187 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 ZNF808Q8N4W9 903 aaPredicted RBP4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 METTL27Q8N6F8 245 aaPredicted RBP4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 ZNF611Q8N823 705 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 WDR31Q8NA23 367 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 SCCPDHQ8NBX0 429 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms