RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 HMGN3Q15651 99 aa9.54□□□□□ -0.88
RABGGTA-213ENST00000560127 PLAC9Q5JTB6 97 aa9.54□□□□□ -0.88
RABGGTA-213ENST00000560127 KCNG3Q8TAE7 436 aa9.54□□□□□ -0.88
RABGGTA-213ENST00000560127 ABHD14BQ96IU4 210 aa9.54□□□□□ -0.88
RABGGTA-213ENST00000560127 TMEM68Q96MH6 324 aa9.54□□□□□ -0.88
RABGGTA-213ENST00000560127 HDHD3Q9BSH5 251 aaPredicted RBP9.54□□□□□ -0.88
RABGGTA-213ENST00000560127 PLGRKTQ9HBL7 147 aa9.54□□□□□ -0.88
RABGGTA-213ENST00000560127 COA4Q9NYJ1 87 aa9.54□□□□□ -0.88
RABGGTA-213ENST00000560127 TECRQ9NZ01 308 aaKnown RBP9.54□□□□□ -0.88
RABGGTA-213ENST00000560127 STEAP1Q9UHE8 339 aa9.54□□□□□ -0.88
RABGGTA-213ENST00000560127 TP53TG1Q9Y2A0 90 aa9.54□□□□□ -0.88
RABGGTA-213ENST00000560127 PROP1O75360 226 aa9.53□□□□□ -0.88
RABGGTA-213ENST00000560127 NAPSAO96009 420 aa9.53□□□□□ -0.88
RABGGTA-213ENST00000560127 GLAP06280 429 aa9.53□□□□□ -0.88
RABGGTA-213ENST00000560127 CD36P16671 472 aa9.53□□□□□ -0.88
RABGGTA-213ENST00000560127 LGALS7P47929 136 aa9.53□□□□□ -0.88
RABGGTA-213ENST00000560127 RPS16P62249 146 aaKnown RBP9.53□□□□□ -0.88
RABGGTA-213ENST00000560127 DEFB135Q30KP9 77 aa9.53□□□□□ -0.88
RABGGTA-213ENST00000560127 C2orf76Q3KRA6 126 aa9.53□□□□□ -0.88
RABGGTA-213ENST00000560127 ZNF880Q6PDB4 577 aa9.53□□□□□ -0.88
RABGGTA-213ENST00000560127 Q6ZWC4 215 aa9.53□□□□□ -0.88
RABGGTA-213ENST00000560127 TMEM61Q8N0U2 210 aa9.53□□□□□ -0.88
RABGGTA-213ENST00000560127 DRAXINQ8NBI3 349 aaPredicted RBP9.53□□□□□ -0.88
RABGGTA-213ENST00000560127 AGMATQ9BSE5 352 aa9.53□□□□□ -0.88
RABGGTA-213ENST00000560127 FAAP24Q9BTP7 215 aa9.53□□□□□ -0.88
RABGGTA-213ENST00000560127 ZNF230Q9UIE0 474 aaPredicted RBP9.53□□□□□ -0.88
RABGGTA-213ENST00000560127 KCNK7Q9Y2U2 307 aa9.53□□□□□ -0.88
RABGGTA-213ENST00000560127 A0A087WXM4 84 aa9.52□□□□□ -0.89
RABGGTA-213ENST00000560127 IGLV2-23P01705 113 aa9.52□□□□□ -0.89
RABGGTA-213ENST00000560127 CRYGBP07316 175 aa9.52□□□□□ -0.89
RABGGTA-213ENST00000560127 APELAP0DMC3 54 aa9.52□□□□□ -0.89
RABGGTA-213ENST00000560127 RAB3BP20337 219 aa9.52□□□□□ -0.89
RABGGTA-213ENST00000560127 SDC2P34741 201 aa9.52□□□□□ -0.89
RABGGTA-213ENST00000560127 ZNF383Q8NA42 475 aa9.52□□□□□ -0.89
RABGGTA-213ENST00000560127 ADAD2Q8NCV1 583 aaKnown RBP9.52□□□□□ -0.89
RABGGTA-213ENST00000560127 OR52B4Q8NGK2 314 aa9.52□□□□□ -0.89
RABGGTA-213ENST00000560127 IL1F10Q8WWZ1 152 aa9.52□□□□□ -0.89
RABGGTA-213ENST00000560127 CACNG8Q8WXS5 425 aa9.52□□□□□ -0.89
RABGGTA-213ENST00000560127 AKIP1Q9NQ31 210 aa9.52□□□□□ -0.89
RABGGTA-213ENST00000560127 AK3Q9UIJ7 227 aa9.52□□□□□ -0.89
RABGGTA-213ENST00000560127 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.51□□□□□ -0.89
RABGGTA-213ENST00000560127 LOC100506127A0A0U1RQW1 187 aa9.51□□□□□ -0.89
RABGGTA-213ENST00000560127 RAB27BO00194 218 aa9.51□□□□□ -0.89
RABGGTA-213ENST00000560127 MYL9P24844 172 aa9.51□□□□□ -0.89
RABGGTA-213ENST00000560127 EXOSC2Q13868 293 aaKnown RBP9.51□□□□□ -0.89
RABGGTA-213ENST00000560127 ARHGAP5-AS1Q96IT6 56 aa9.51□□□□□ -0.89
RABGGTA-213ENST00000560127 PECRQ9BY49 303 aa9.51□□□□□ -0.89
RABGGTA-213ENST00000560127 SSR3Q9UNL2 185 aa9.51□□□□□ -0.89
RABGGTA-213ENST00000560127 DMRT1Q9Y5R6 373 aa9.51□□□□□ -0.89
RABGGTA-213ENST00000560127 NOTOA8MTQ0 251 aa9.5□□□□□ -0.89
RABGGTA-213ENST00000560127 PPP5D1E7EU14 171 aa9.5□□□□□ -0.89
RABGGTA-213ENST00000560127 MFNGO00587 321 aa9.5□□□□□ -0.89
RABGGTA-213ENST00000560127 ITGB1BP1O14713 200 aa9.5□□□□□ -0.89
RABGGTA-213ENST00000560127 PDCD5O14737 125 aa9.5□□□□□ -0.89
RABGGTA-213ENST00000560127 CBLN1P23435 193 aa9.5□□□□□ -0.89
RABGGTA-213ENST00000560127 RHOGP84095 191 aa9.5□□□□□ -0.89
RABGGTA-213ENST00000560127 ZNF45Q02386 682 aa9.5□□□□□ -0.89
RABGGTA-213ENST00000560127 MRGPRG-AS1Q2M3A8 158 aa9.5□□□□□ -0.89
RABGGTA-213ENST00000560127 TM4SF20Q53R12 229 aa9.5□□□□□ -0.89
RABGGTA-213ENST00000560127 ZNF57Q68EA5 555 aaPredicted RBP9.5□□□□□ -0.89
RABGGTA-213ENST00000560127 SFXN4Q6P4A7 337 aa9.5□□□□□ -0.89
RABGGTA-213ENST00000560127 LINC00336Q6ZUF6 198 aa9.5□□□□□ -0.89
RABGGTA-213ENST00000560127 PDPNQ86YL7 162 aa9.5□□□□□ -0.89
RABGGTA-213ENST00000560127 TMEM217Q8N7C4 229 aa9.5□□□□□ -0.89
RABGGTA-213ENST00000560127 OR13F1Q8NGS4 319 aa9.5□□□□□ -0.89
RABGGTA-213ENST00000560127 LGALS14Q8TCE9 139 aa9.5□□□□□ -0.89
RABGGTA-213ENST00000560127 RNF183Q96D59 192 aa9.5□□□□□ -0.89
RABGGTA-213ENST00000560127 SLC25A38Q96DW6 304 aa9.5□□□□□ -0.89
RABGGTA-213ENST00000560127 NAA50Q9GZZ1 169 aaKnown RBP9.5□□□□□ -0.89
RABGGTA-213ENST00000560127 C11orf54Q9H0W9 315 aaPredicted RBP9.5□□□□□ -0.89
RABGGTA-213ENST00000560127 ABRACLQ9P1F3 81 aa9.5□□□□□ -0.89
RABGGTA-213ENST00000560127 ELF5Q9UKW6 265 aaPredicted RBP9.5□□□□□ -0.89
RABGGTA-213ENST00000560127 HSF4Q9ULV5 492 aa9.5□□□□□ -0.89
RABGGTA-213ENST00000560127 TRBV6-6A0A0A6YYG2 114 aa9.49□□□□□ -0.89
RABGGTA-213ENST00000560127 LGALS9O00182 355 aa9.49□□□□□ -0.89
RABGGTA-213ENST00000560127 SCAF4O95104 1147 aaKnown RBP9.49□□□□□ -0.89
RABGGTA-213ENST00000560127 HLA-AP01891 365 aaKnown RBP9.49□□□□□ -0.89
RABGGTA-213ENST00000560127 PRH1P02810 166 aa9.49□□□□□ -0.89
RABGGTA-213ENST00000560127 OR9G9P0C7N8 305 aa9.49□□□□□ -0.89
RABGGTA-213ENST00000560127 APOC4P55056 127 aa9.49□□□□□ -0.89
RABGGTA-213ENST00000560127 MXD1Q05195 221 aa9.49□□□□□ -0.89
RABGGTA-213ENST00000560127 ATP5G2Q06055 141 aa9.49□□□□□ -0.89
RABGGTA-213ENST00000560127 OR5H6Q8NGV6 325 aa9.49□□□□□ -0.89
RABGGTA-213ENST00000560127 NEDD4LQ96PU5 975 aa9.49□□□□□ -0.89
RABGGTA-213ENST00000560127 MLXQ9UH92 298 aa9.49□□□□□ -0.89
RABGGTA-213ENST00000560127 TRBV9A0A0B4J1U6 114 aa9.48□□□□□ -0.89
RABGGTA-213ENST00000560127 IGKV1-6A0A0C4DH72 117 aa9.48□□□□□ -0.89
RABGGTA-213ENST00000560127 TMEM213A2RRL7 107 aa9.48□□□□□ -0.89
RABGGTA-213ENST00000560127 FAM223BA6NKX1 122 aa9.48□□□□□ -0.89
RABGGTA-213ENST00000560127 OR2C1O95371 312 aa9.48□□□□□ -0.89
RABGGTA-213ENST00000560127 RAB6AP20340 208 aa9.48□□□□□ -0.89
RABGGTA-213ENST00000560127 PSMD7P51665 324 aa9.48□□□□□ -0.89
RABGGTA-213ENST00000560127 NCS1P62166 190 aa9.48□□□□□ -0.89
RABGGTA-213ENST00000560127 LSM3P62310 102 aaKnown RBP9.48□□□□□ -0.89
RABGGTA-213ENST00000560127 ANKRD55Q3KP44 614 aa9.48□□□□□ -0.89
RABGGTA-213ENST00000560127 TPRA1Q86W33 373 aa9.48□□□□□ -0.89
RABGGTA-213ENST00000560127 FAM223AQ8IWN6 122 aa9.48□□□□□ -0.89
RABGGTA-213ENST00000560127 PHB2Q99623 299 aa9.48□□□□□ -0.89
RABGGTA-213ENST00000560127 URM1Q9BTM9 101 aaKnown RBP9.48□□□□□ -0.89
RABGGTA-213ENST00000560127 OR1A1Q9P1Q5 309 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms