RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 DEFB112Q30KQ8 113 aa4.18□□□□□ -1.74
SPG11-220ENST00000559933 TMEM30BQ3MIR4 351 aa4.18□□□□□ -1.74
SPG11-220ENST00000559933 ZNF585BQ52M93 769 aa4.18□□□□□ -1.74
SPG11-220ENST00000559933 GPR157Q5UAW9 335 aa4.18□□□□□ -1.74
SPG11-220ENST00000559933 SPNS3Q6ZMD2 512 aa4.18□□□□□ -1.74
SPG11-220ENST00000559933 Q6ZNX1 250 aa4.18□□□□□ -1.74
SPG11-220ENST00000559933 C1orf122Q6ZSJ8 110 aa4.18□□□□□ -1.74
SPG11-220ENST00000559933 SSX9Q7RTT3 188 aa4.18□□□□□ -1.74
SPG11-220ENST00000559933 LYG2Q86SG7 212 aa4.18□□□□□ -1.74
SPG11-220ENST00000559933 TMEM219Q86XT9 240 aa4.18□□□□□ -1.74
SPG11-220ENST00000559933 TGIF2LXQ8IUE1 241 aa4.18□□□□□ -1.74
SPG11-220ENST00000559933 UXS1Q8NBZ7 420 aa4.18□□□□□ -1.74
SPG11-220ENST00000559933 BEND2Q8NDZ0 799 aa4.18□□□□□ -1.74
SPG11-220ENST00000559933 ZFAND1Q8TCF1 268 aa4.18□□□□□ -1.74
SPG11-220ENST00000559933 DEDD2Q8WXF8 326 aa4.18□□□□□ -1.74
SPG11-220ENST00000559933 DDB2Q92466 427 aa4.18□□□□□ -1.74
SPG11-220ENST00000559933 CFHR4Q92496 578 aa4.18□□□□□ -1.74
SPG11-220ENST00000559933 DUX5Q96PT3 197 aa4.18□□□□□ -1.74
SPG11-220ENST00000559933 SLC25A21Q9BQT8 299 aaPredicted RBP4.18□□□□□ -1.74
SPG11-220ENST00000559933 HEXA-AS1Q9H8Q6 139 aa4.18□□□□□ -1.74
SPG11-220ENST00000559933 RAB9BQ9NP90 201 aa4.18□□□□□ -1.74
SPG11-220ENST00000559933 SLC35D1Q9NTN3 355 aa4.18□□□□□ -1.74
SPG11-220ENST00000559933 F8P00451 2351 aa4.18□□□□□ -1.74
SPG11-220ENST00000559933 MXRA5Q9NR99 2828 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 MTORP42345 2549 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 TRAV3A0A0B4J244 114 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 SRRM4A7MD48 611 aaKnown RBP4.17□□□□□ -1.74
SPG11-220ENST00000559933 H0Y980 276 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 SMLR1H3BR10 107 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 H3BUX3 64 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 J3QLI3 93 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 GOSR2O14653 212 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 ITGB1BP1O14713 200 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 VENTXO95231 258 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 CRYZL1O95825 349 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 IFNA2P01563 188 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 IGKV1D-33P01593 117 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 IGKV1-33P01594 117 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 IGKV1-5P01602 117 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 IGHV4-59P01825 116 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 SNRNP70P08621 437 aaKnown RBP4.17□□□□□ -1.74
SPG11-220ENST00000559933 HOXB5P09067 269 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 CXCL3P19876 107 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 GATA3P23771 443 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 F2RP25116 425 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 IL3RAP26951 378 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 G6PCP35575 357 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 LPAR6P43657 344 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 MECP2P51608 486 aaKnown RBP4.17□□□□□ -1.74
SPG11-220ENST00000559933 ZNF137PP52743 207 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 LGALS4P56470 323 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 OR2B8PP59922 312 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 DHODHQ02127 395 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 FCN2Q15485 313 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 SPINK9Q5DT21 86 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 LY6G6FQ5SQ64 297 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 TMEM268Q5VZI3 342 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 CLEC9AQ6UXN8 241 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 LYZL2Q7Z4W2 148 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 SGPP2Q8IWX5 399 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 CMTM1Q8IZ96 169 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 SELENOHQ8IZQ5 122 aaKnown RBP4.17□□□□□ -1.74
SPG11-220ENST00000559933 SPAG16Q8N0X2 631 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 CADM3Q8N126 398 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 SLC35G3Q8N808 338 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 C8orf31Q8N9H6 132 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 CCDC71LQ8N9Z2 235 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 ZNF431Q8TF32 576 aaPredicted RBP4.17□□□□□ -1.74
SPG11-220ENST00000559933 GLYATL2Q8WU03 294 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 CHAC2Q8WUX2 184 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 ZNF486Q96H40 463 aaPredicted RBP4.17□□□□□ -1.74
SPG11-220ENST00000559933 AKR1E2Q96JD6 320 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 CLCC1Q96S66 551 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 S1PR3Q99500 378 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 OR51J1Q9H342 316 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 GHITMQ9H3K2 345 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 PIPOXQ9P0Z9 390 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 DPM3Q9P2X0 92 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 NUP50Q9UKX7 468 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 NSG2Q9Y328 171 aa4.17□□□□□ -1.74
SPG11-220ENST00000559933 AMMECR1Q9Y4X0 333 aaPredicted RBP4.17□□□□□ -1.74
SPG11-220ENST00000559933 SETD2Q9BYW2 2564 aaPredicted RBP4.17□□□□□ -1.74
SPG11-220ENST00000559933 FN1P02751 2386 aaKnown RBP4.17□□□□□ -1.74
SPG11-220ENST00000559933 NSD1Q96L73 2696 aaPredicted RBP4.16□□□□□ -1.74
SPG11-220ENST00000559933 C7orf66A4D0T2 115 aa4.16□□□□□ -1.74
SPG11-220ENST00000559933 FAM25EA8MYX2 175 aa4.16□□□□□ -1.74
SPG11-220ENST00000559933 LEUTXA8MZ59 168 aa4.16□□□□□ -1.74
SPG11-220ENST00000559933 H7C2Y5 167 aa4.16□□□□□ -1.74
SPG11-220ENST00000559933 SSNA1O43805 119 aa4.16□□□□□ -1.74
SPG11-220ENST00000559933 CHST1O43916 411 aa4.16□□□□□ -1.74
SPG11-220ENST00000559933 CREBL2O60519 120 aaPredicted RBP4.16□□□□□ -1.74
SPG11-220ENST00000559933 IGLV2-23P01705 113 aa4.16□□□□□ -1.74
SPG11-220ENST00000559933 APOA2P02652 100 aa4.16□□□□□ -1.74
SPG11-220ENST00000559933 GAPDHP04406 335 aaKnown RBP4.16□□□□□ -1.74
SPG11-220ENST00000559933 IL5P05113 134 aa4.16□□□□□ -1.74
SPG11-220ENST00000559933 OR9G9P0C7N8 305 aa4.16□□□□□ -1.74
SPG11-220ENST00000559933 SAA1P0DJI8 122 aaPredicted RBP4.16□□□□□ -1.74
SPG11-220ENST00000559933 UCP1P25874 307 aa4.16□□□□□ -1.74
SPG11-220ENST00000559933 SRP14P37108 136 aaKnown RBP4.16□□□□□ -1.74
SPG11-220ENST00000559933 THBS3P49746 956 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms