RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 MED9Q9NWA0 146 aa0.51□□□□□ -2.33
CASC4-210ENST00000559550 TIMM9Q9Y5J7 89 aa0.51□□□□□ -2.33
CASC4-210ENST00000559550 CPAMD8Q8IZJ3 1885 aa0.5□□□□□ -2.33
CASC4-210ENST00000559550 TRAPPC13A5PLN9 417 aa0.5□□□□□ -2.33
CASC4-210ENST00000559550 H7C2G1 150 aa0.5□□□□□ -2.33
CASC4-210ENST00000559550 ATP6V1G2O95670 118 aa0.5□□□□□ -2.33
CASC4-210ENST00000559550 PPBPP02775 128 aa0.5□□□□□ -2.33
CASC4-210ENST00000559550 PSMB8P28062 276 aa0.5□□□□□ -2.33
CASC4-210ENST00000559550 CCR7P32248 378 aa0.5□□□□□ -2.33
CASC4-210ENST00000559550 CD79BP40259 229 aa0.5□□□□□ -2.33
CASC4-210ENST00000559550 HADHBP55084 474 aaKnown RBP0.5□□□□□ -2.33
CASC4-210ENST00000559550 CLDN12P56749 244 aa0.5□□□□□ -2.33
CASC4-210ENST00000559550 FXYD7P58549 80 aa0.5□□□□□ -2.33
CASC4-210ENST00000559550 TAS2R20P59543 309 aa0.5□□□□□ -2.33
CASC4-210ENST00000559550 FKBP1AP62942 108 aaKnown RBP0.5□□□□□ -2.33
CASC4-210ENST00000559550 DNAL1Q4LDG9 190 aa0.5□□□□□ -2.33
CASC4-210ENST00000559550 OR5L1Q8NGL2 311 aa0.5□□□□□ -2.33
CASC4-210ENST00000559550 SLC37A2Q8TED4 501 aa0.5□□□□□ -2.33
CASC4-210ENST00000559550 RAB2BQ8WUD1 216 aa0.5□□□□□ -2.33
CASC4-210ENST00000559550 MBD3L1Q8WWY6 194 aa0.5□□□□□ -2.33
CASC4-210ENST00000559550 LRRC45Q96CN5 670 aa0.5□□□□□ -2.33
CASC4-210ENST00000559550 C22orf24Q9Y442 160 aa0.5□□□□□ -2.33
CASC4-210ENST00000559550 NAV1Q8NEY1 1877 aa0.5□□□□□ -2.33
CASC4-210ENST00000559550 RIMS2Q9UQ26 1411 aa0.49□□□□□ -2.33
CASC4-210ENST00000559550 IGKV2D-26A0A0A0MRZ7 120 aa0.49□□□□□ -2.33
CASC4-210ENST00000559550 TRAV38-1A0A0B4J264 116 aa0.49□□□□□ -2.33
CASC4-210ENST00000559550 A0A0J9YW62 118 aa0.49□□□□□ -2.33
CASC4-210ENST00000559550 ORC5O43913 435 aa0.49□□□□□ -2.33
CASC4-210ENST00000559550 TFPTP0C1Z6 253 aa0.49□□□□□ -2.33
CASC4-210ENST00000559550 CCL5P13501 91 aa0.49□□□□□ -2.33
CASC4-210ENST00000559550 IL9P15248 144 aa0.49□□□□□ -2.33
CASC4-210ENST00000559550 EMP1P54849 157 aa0.49□□□□□ -2.33
CASC4-210ENST00000559550 RAB14P61106 215 aa0.49□□□□□ -2.33
CASC4-210ENST00000559550 JOSD1Q15040 202 aaPredicted RBP0.49□□□□□ -2.33
CASC4-210ENST00000559550 LRRC75BQ2VPJ9 315 aa0.49□□□□□ -2.33
CASC4-210ENST00000559550 NAA40Q86UY6 237 aa0.49□□□□□ -2.33
CASC4-210ENST00000559550 CRLF3Q8IUI8 442 aa0.49□□□□□ -2.33
CASC4-210ENST00000559550 SPERTQ8NA61 448 aa0.49□□□□□ -2.33
CASC4-210ENST00000559550 TREM1Q9NP99 234 aa0.49□□□□□ -2.33
CASC4-210ENST00000559550 TP53TG1Q9Y2A0 90 aa0.49□□□□□ -2.33
CASC4-210ENST00000559550 SCAF11Q99590 1463 aaKnown RBP0.48□□□□□ -2.33
CASC4-210ENST00000559550 A0A1W2PP64 1363 aa0.48□□□□□ -2.33
CASC4-210ENST00000559550 FLT4P35916 1363 aa0.48□□□□□ -2.33
CASC4-210ENST00000559550 LRPPRCP42704 1394 aaKnown RBP0.48□□□□□ -2.33
CASC4-210ENST00000559550 MDN1Q9NU22 5596 aa0.48□□□□□ -2.33
CASC4-210ENST00000559550 F8VZ95 297 aa0.48□□□□□ -2.33
CASC4-210ENST00000559550 TRAPPC2LH3BP13 241 aa0.48□□□□□ -2.33
CASC4-210ENST00000559550 K7ERQ8 282 aa0.48□□□□□ -2.33
CASC4-210ENST00000559550 CCRL2O00421 344 aa0.48□□□□□ -2.33
CASC4-210ENST00000559550 NDUFS6O75380 124 aaKnown RBP0.48□□□□□ -2.33
CASC4-210ENST00000559550 ORM1P02763 201 aa0.48□□□□□ -2.33
CASC4-210ENST00000559550 ALDH3A1P30838 453 aa0.48□□□□□ -2.33
CASC4-210ENST00000559550 RPS24P62847 133 aaKnown RBP0.48□□□□□ -2.33
CASC4-210ENST00000559550 HLA-DRB3P79483 266 aa0.48□□□□□ -2.33
CASC4-210ENST00000559550 PMS2P3Q13401 168 aa0.48□□□□□ -2.33
CASC4-210ENST00000559550 ELOBQ15370 118 aa0.48□□□□□ -2.33
CASC4-210ENST00000559550 ACSM3Q53FZ2 586 aa0.48□□□□□ -2.33
CASC4-210ENST00000559550 RASSF6Q6ZTQ3 369 aa0.48□□□□□ -2.33
CASC4-210ENST00000559550 SPATA24Q86W54 205 aa0.48□□□□□ -2.33
CASC4-210ENST00000559550 LFNGQ8NES3 379 aa0.48□□□□□ -2.33
CASC4-210ENST00000559550 MS4A6AQ9H2W1 248 aa0.48□□□□□ -2.33
CASC4-210ENST00000559550 ZNHIT6Q9NWK9 470 aaKnown RBP0.48□□□□□ -2.33
CASC4-210ENST00000559550 CHMP5Q9NZZ3 219 aa0.48□□□□□ -2.33
CASC4-210ENST00000559550 NAT8Q9UHE5 227 aa0.48□□□□□ -2.33
CASC4-210ENST00000559550 SIPA1L1O43166 1804 aa0.48□□□□□ -2.33
CASC4-210ENST00000559550 MICAL3Q7RTP6 2002 aa0.47□□□□□ -2.33
CASC4-210ENST00000559550 AHNAKQ09666 5890 aaKnown RBP0.47□□□□□ -2.33
CASC4-210ENST00000559550 DICER1Q9UPY3 1922 aaKnown RBP0.47□□□□□ -2.33
CASC4-210ENST00000559550 TMEM269A0A1B0GVZ9 245 aa0.47□□□□□ -2.33
CASC4-210ENST00000559550 FTCDNL1E5RQL4 147 aa0.47□□□□□ -2.33
CASC4-210ENST00000559550 TOX3O15405 576 aaPredicted RBP0.47□□□□□ -2.33
CASC4-210ENST00000559550 YKT6O15498 198 aa0.47□□□□□ -2.33
CASC4-210ENST00000559550 HCRTO43612 131 aa0.47□□□□□ -2.33
CASC4-210ENST00000559550 CREBL2O60519 120 aaPredicted RBP0.47□□□□□ -2.33
CASC4-210ENST00000559550 PLPPR5Q32ZL2 321 aa0.47□□□□□ -2.33
CASC4-210ENST00000559550 RPS19BP1Q86WX3 136 aaKnown RBP0.47□□□□□ -2.33
CASC4-210ENST00000559550 OR52A5Q9H2C5 316 aa0.47□□□□□ -2.33
CASC4-210ENST00000559550 HEATR5BQ9P2D3 2071 aa0.47□□□□□ -2.33
CASC4-210ENST00000559550 TEX50A0A1B0GTY4 177 aa0.46□□□□□ -2.34
CASC4-210ENST00000559550 C5orf49A4QMS7 147 aa0.46□□□□□ -2.34
CASC4-210ENST00000559550 MEIS3P1A6NDR6 274 aa0.46□□□□□ -2.34
CASC4-210ENST00000559550 OR51F1A6NGY5 319 aa0.46□□□□□ -2.34
CASC4-210ENST00000559550 IBA57-AS1B1ANH7 110 aa0.46□□□□□ -2.34
CASC4-210ENST00000559550 COX7A2LO14548 114 aa0.46□□□□□ -2.34
CASC4-210ENST00000559550 IL6P05231 212 aa0.46□□□□□ -2.34
CASC4-210ENST00000559550 TRGC1P0CF51 173 aa0.46□□□□□ -2.34
CASC4-210ENST00000559550 AP1S1P61966 158 aa0.46□□□□□ -2.34
CASC4-210ENST00000559550 RPP25LQ8N5L8 163 aaKnown RBP0.46□□□□□ -2.34
CASC4-210ENST00000559550 CCL13Q99616 98 aa0.46□□□□□ -2.34
CASC4-210ENST00000559550 TIPINQ9BVW5 301 aa0.46□□□□□ -2.34
CASC4-210ENST00000559550 CHST6Q9GZX3 395 aa0.46□□□□□ -2.34
CASC4-210ENST00000559550 SLC22A4Q9H015 551 aa0.46□□□□□ -2.34
CASC4-210ENST00000559550 HRASLSQ9HDD0 168 aa0.46□□□□□ -2.34
CASC4-210ENST00000559550 NUP160Q12769 1436 aa0.46□□□□□ -2.34
CASC4-210ENST00000559550 KIF24Q5T7B8 1368 aa0.45□□□□□ -2.34
CASC4-210ENST00000559550 STX10O60499 249 aa0.45□□□□□ -2.34
CASC4-210ENST00000559550 SCN2BO60939 215 aa0.45□□□□□ -2.34
CASC4-210ENST00000559550 NSA2O95478 260 aaKnown RBP0.45□□□□□ -2.34
CASC4-210ENST00000559550 HIST1H1CP16403 213 aaKnown RBP0.45□□□□□ -2.34
CASC4-210ENST00000559550 SLCO1A2P46721 670 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms