RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 ZCCHC24Q8N2G6 241 aaKnown RBP9.11□□□□□ -0.95
SPG11-217ENST00000559511 DDB2Q92466 427 aa9.11□□□□□ -0.95
SPG11-217ENST00000559511 PINX1Q96BK5 328 aaKnown RBP9.11□□□□□ -0.95
SPG11-217ENST00000559511 RAB39BQ96DA2 213 aa9.11□□□□□ -0.95
SPG11-217ENST00000559511 SPOCK3Q9BQ16 436 aa9.11□□□□□ -0.95
SPG11-217ENST00000559511 VKORC1Q9BQB6 163 aa9.11□□□□□ -0.95
SPG11-217ENST00000559511 PRELID1Q9Y255 219 aa9.11□□□□□ -0.95
SPG11-217ENST00000559511 SAA2-SAA4A0A096LPE2 208 aa9.11□□□□□ -0.95
SPG11-217ENST00000559511 TRAV3A0A0B4J244 114 aa9.11□□□□□ -0.95
SPG11-217ENST00000559511 MAP1LC3B2A6NCE7 125 aa9.11□□□□□ -0.95
SPG11-217ENST00000559511 RBFOX2O43251 390 aaKnown RBP eCLIP9.11□□□□□ -0.95
SPG11-217ENST00000559511 IFNA17P01571 189 aa9.11□□□□□ -0.95
SPG11-217ENST00000559511 MT-ND4LP03901 98 aa9.11□□□□□ -0.95
SPG11-217ENST00000559511 SAA2P0DJI9 122 aaPredicted RBP9.11□□□□□ -0.95
SPG11-217ENST00000559511 BSPH1Q075Z2 132 aa9.11□□□□□ -0.95
SPG11-217ENST00000559511 ADIPOQQ15848 244 aa9.11□□□□□ -0.95
SPG11-217ENST00000559511 VWC2Q2TAL6 325 aa9.11□□□□□ -0.95
SPG11-217ENST00000559511 PRAMEF5Q5TYX0 476 aa9.11□□□□□ -0.95
SPG11-217ENST00000559511 ZNF788Q6ZQV5 615 aa9.11□□□□□ -0.95
SPG11-217ENST00000559511 FAM24BQ8N5W8 94 aa9.11□□□□□ -0.95
SPG11-217ENST00000559511 S1PR3Q99500 378 aa9.11□□□□□ -0.95
SPG11-217ENST00000559511 MAP1LC3BQ9GZQ8 125 aa9.11□□□□□ -0.95
SPG11-217ENST00000559511 CISD1Q9NZ45 108 aaKnown RBP9.11□□□□□ -0.95
SPG11-217ENST00000559511 TRGV10A0A0A0MS01 117 aa9.1□□□□□ -0.95
SPG11-217ENST00000559511 hCG_1809904A0A1W2PP81 198 aa9.1□□□□□ -0.95
SPG11-217ENST00000559511 A0A1W2PR64 198 aa9.1□□□□□ -0.95
SPG11-217ENST00000559511 A0A1W2PRV1 198 aa9.1□□□□□ -0.95
SPG11-217ENST00000559511 ITGB1BP1O14713 200 aa9.1□□□□□ -0.95
SPG11-217ENST00000559511 OR4A8P0C604 315 aa9.1□□□□□ -0.95
SPG11-217ENST00000559511 TEX36Q5VZQ5 186 aa9.1□□□□□ -0.95
SPG11-217ENST00000559511 FAM90A2PQ658T7 463 aa9.1□□□□□ -0.95
SPG11-217ENST00000559511 ZNF251Q9BRH9 671 aa9.1□□□□□ -0.95
SPG11-217ENST00000559511 NPCDR1Q9BY65 106 aa9.1□□□□□ -0.95
SPG11-217ENST00000559511 TRGV8A0A0C4DH27 118 aa9.1□□□□□ -0.95
SPG11-217ENST00000559511 FAM90A9PA6NNJ1 464 aa9.1□□□□□ -0.95
SPG11-217ENST00000559511 ZNF727A8MUV8 499 aa9.1□□□□□ -0.95
SPG11-217ENST00000559511 HMGB3O15347 200 aaKnown RBP9.1□□□□□ -0.95
SPG11-217ENST00000559511 MMP23AO75900 390 aa9.1□□□□□ -0.95
SPG11-217ENST00000559511 MDKP21741 143 aaPredicted RBP9.1□□□□□ -0.95
SPG11-217ENST00000559511 RAB7AP51149 207 aa9.1□□□□□ -0.95
SPG11-217ENST00000559511 GNB2P62879 340 aa9.1□□□□□ -0.95
SPG11-217ENST00000559511 DLK1P80370 383 aa9.1□□□□□ -0.95
SPG11-217ENST00000559511 RELBQ01201 579 aa9.1□□□□□ -0.95
SPG11-217ENST00000559511 ZNF439Q8NDP4 499 aa9.1□□□□□ -0.95
SPG11-217ENST00000559511 OR10G4Q8NGN3 311 aa9.1□□□□□ -0.95
SPG11-217ENST00000559511 OR4A16Q8NH70 328 aa9.1□□□□□ -0.95
SPG11-217ENST00000559511 YPEL4Q96NS1 127 aa9.1□□□□□ -0.95
SPG11-217ENST00000559511 WFIKKN1Q96NZ8 548 aa9.1□□□□□ -0.95
SPG11-217ENST00000559511 SLC25A22Q9H936 323 aa9.1□□□□□ -0.95
SPG11-217ENST00000559511 TMEM140Q9NV12 185 aa9.1□□□□□ -0.95
SPG11-217ENST00000559511 GAB2Q9UQC2 676 aa9.1□□□□□ -0.95
SPG11-217ENST00000559511 KLF2Q9Y5W3 355 aaPredicted RBP9.1□□□□□ -0.95
SPG11-217ENST00000559511 PKDREJQ9NTG1 2253 aa9.09□□□□□ -0.95
SPG11-217ENST00000559511 RELNP78509 3460 aa9.09□□□□□ -0.95
SPG11-217ENST00000559511 OR2C1O95371 312 aa9.09□□□□□ -0.95
SPG11-217ENST00000559511 IRF2P14316 349 aa9.09□□□□□ -0.95
SPG11-217ENST00000559511 NQO2P16083 231 aa9.09□□□□□ -0.95
SPG11-217ENST00000559511 TAGLN2P37802 199 aaKnown RBP9.09□□□□□ -0.95
SPG11-217ENST00000559511 GNG10P50151 68 aa9.09□□□□□ -0.95
SPG11-217ENST00000559511 SPCS3P61009 180 aa9.09□□□□□ -0.95
SPG11-217ENST00000559511 ERVK-16P61578 105 aa9.09□□□□□ -0.95
SPG11-217ENST00000559511 RAB11AP62491 216 aa9.09□□□□□ -0.95
SPG11-217ENST00000559511 KLRB1Q12918 225 aa9.09□□□□□ -0.95
SPG11-217ENST00000559511 RNF212Q495C1 297 aa9.09□□□□□ -0.95
SPG11-217ENST00000559511 ADAM5Q6NVV9 412 aa9.09□□□□□ -0.95
SPG11-217ENST00000559511 LYG1Q8N1E2 194 aa9.09□□□□□ -0.95
SPG11-217ENST00000559511 CA5BP1Q8WTZ4 195 aa9.09□□□□□ -0.95
SPG11-217ENST00000559511 NIPSNAP3BQ9BS92 247 aa9.09□□□□□ -0.95
SPG11-217ENST00000559511 SLC39A9Q9NUM3 307 aa9.09□□□□□ -0.95
SPG11-217ENST00000559511 ZZEF1O43149 2961 aa9.08□□□□□ -0.96
SPG11-217ENST00000559511 C17orf100A8MU93 164 aa9.08□□□□□ -0.96
SPG11-217ENST00000559511 TMPRSS2O15393 492 aa9.08□□□□□ -0.96
SPG11-217ENST00000559511 C1QTNF9P0C862 333 aa9.08□□□□□ -0.96
SPG11-217ENST00000559511 FOSL1P15407 271 aa9.08□□□□□ -0.96
SPG11-217ENST00000559511 RAB5AP20339 215 aa9.08□□□□□ -0.96
SPG11-217ENST00000559511 KIR2DS2P43631 304 aa9.08□□□□□ -0.96
SPG11-217ENST00000559511 VDAC2P45880 294 aaPredicted RBP9.08□□□□□ -0.96
SPG11-217ENST00000559511 ERVFRD-1P60508 538 aa9.08□□□□□ -0.96
SPG11-217ENST00000559511 TLE1Q04724 770 aa9.08□□□□□ -0.96
SPG11-217ENST00000559511 PDLIM3Q53GG5 364 aaPredicted RBP9.08□□□□□ -0.96
SPG11-217ENST00000559511 FFAR4Q5NUL3 377 aa9.08□□□□□ -0.96
SPG11-217ENST00000559511 SSX8Q7RTT4 187 aa9.08□□□□□ -0.96
SPG11-217ENST00000559511 Q8N7P7 452 aa9.08□□□□□ -0.96
SPG11-217ENST00000559511 ZNF383Q8NA42 475 aa9.08□□□□□ -0.96
SPG11-217ENST00000559511 OR4S2Q8NH73 311 aa9.08□□□□□ -0.96
SPG11-217ENST00000559511 LHX4Q969G2 390 aa9.08□□□□□ -0.96
SPG11-217ENST00000559511 TVP23CQ96ET8 276 aa9.08□□□□□ -0.96
SPG11-217ENST00000559511 LINC00574Q9H8X3 128 aa9.08□□□□□ -0.96
SPG11-217ENST00000559511 RAB9BQ9NP90 201 aa9.08□□□□□ -0.96
SPG11-217ENST00000559511 BIN3Q9NQY0 253 aa9.08□□□□□ -0.96
SPG11-217ENST00000559511 IDI2-AS1Q9NZ38 188 aa9.08□□□□□ -0.96
SPG11-217ENST00000559511 ZNRD1Q9P1U0 126 aa9.08□□□□□ -0.96
SPG11-217ENST00000559511 LRBAP50851 2863 aa9.08□□□□□ -0.96
SPG11-217ENST00000559511 ZNF729A6NN14 1252 aaPredicted RBP9.08□□□□□ -0.96
SPG11-217ENST00000559511 RRHO14718 337 aa9.08□□□□□ -0.96
SPG11-217ENST00000559511 DEFA4P12838 97 aa9.08□□□□□ -0.96
SPG11-217ENST00000559511 TNFRSF1AP19438 455 aa9.08□□□□□ -0.96
SPG11-217ENST00000559511 CA7P43166 264 aa9.08□□□□□ -0.96
SPG11-217ENST00000559511 ATRXP46100 2492 aa9.08□□□□□ -0.96
SPG11-217ENST00000559511 RAB5BP61020 215 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms