RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 CTF1Q16619 201 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 PDLIM3Q53GG5 364 aaPredicted RBP3.42□□□□□ -1.86
SNX1-205ENST00000559339 TMEM177Q53S58 311 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 KPRPQ5T749 579 aaPredicted RBP3.42□□□□□ -1.86
SNX1-205ENST00000559339 SAMD5Q5TGI4 173 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 DHRS11Q6UWP2 260 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 IDO2Q6ZQW0 420 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 TMEM17Q86X19 198 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 SNX29P2Q8IUI4 249 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 MRPL41Q8IXM3 137 aaKnown RBP3.42□□□□□ -1.86
SNX1-205ENST00000559339 MFSD4AQ8N468 514 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 LINC00482Q8N8I6 264 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 TEX45Q8NA69 505 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 OR11H1Q8NG94 326 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 OR1N2Q8NGR9 330 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 DDB2Q92466 427 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 RBMXL1Q96E39 390 aaKnown RBP3.42□□□□□ -1.86
SNX1-205ENST00000559339 OR2A7Q96R45 310 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 P2RX4Q99571 388 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 SPIN2AQ99865 258 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 SPIN2BQ9BPZ2 258 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 BCL7BQ9BQE9 202 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 FAM103A1Q9BTL3 118 aaKnown RBP3.42□□□□□ -1.86
SNX1-205ENST00000559339 SLC5A7Q9GZV3 580 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 SCOCQ9UIL1 159 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 NUBP2Q9Y5Y2 271 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 NOTCH1P46531 2555 aa3.42□□□□□ -1.86
SNX1-205ENST00000559339 VWFP04275 2813 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 IGKV1D-13A0A0B4J2D9 117 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 C13orf42A0A1B0GVH6 325 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 DPPA5A6NC42 116 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 CCDC160A6NGH7 325 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 MSGN1A6NI15 193 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 SRRM4A7MD48 611 aaKnown RBP3.41□□□□□ -1.86
SNX1-205ENST00000559339 ARPC1BO15143 372 aaKnown RBP3.41□□□□□ -1.86
SNX1-205ENST00000559339 CYB5BO43169 146 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 RBFOX2O43251 390 aaKnown RBP eCLIP3.41□□□□□ -1.86
SNX1-205ENST00000559339 RAMP3O60896 148 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 HPRT1P00492 218 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 IGLV2-14P01704 120 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 IGLV2-23P01705 113 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 PMP2P02689 132 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 TRGV3P03979 118 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 SAA1P0DJI8 122 aaPredicted RBP3.41□□□□□ -1.86
SNX1-205ENST00000559339 SMIM18P0DKX4 95 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 IGKV1-13P0DP09 117 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 PTHLHP12272 177 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 DEFA4P12838 97 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 NQO2P16083 231 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 TBPP20226 339 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 ZP3P21754 424 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 GNRHRP30968 328 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 RCVRNP35243 200 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 HRH1P35367 487 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 MAS1LP35410 378 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 ALDH3B2P48448 385 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 INSL3P51460 131 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 TAS2R31P59538 309 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 ERVK-16P61578 105 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 MRPS10P82664 201 aaKnown RBP3.41□□□□□ -1.86
SNX1-205ENST00000559339 NDPQ00604 133 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 PJVKQ0ZLH3 352 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 DCTN2Q13561 401 aaKnown RBP3.41□□□□□ -1.86
SNX1-205ENST00000559339 PRSS8Q16651 343 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 TATDN3Q17R31 274 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 DEFB136Q30KP8 78 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 BEAN1Q3B7T3 259 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 OR2B11Q5JQS5 317 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 FAM209BQ5JX69 171 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 AADACL3Q5VUY0 350 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 FOXB2Q5VYV0 432 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 ZNF818PQ6ZRF7 136 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 C18orf65Q6ZTR6 163 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 SLC25A42Q86VD7 318 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 CLVS1Q8IUQ0 354 aaPredicted RBP3.41□□□□□ -1.86
SNX1-205ENST00000559339 MMD2Q8IY49 270 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 SPAG16Q8N0X2 631 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 ZNF491Q8N8L2 437 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 DMBX1Q8NFW5 382 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 OR51H1Q8NH63 302 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 OR4A5Q8NH83 315 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 FCAMRQ8WWV6 532 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 SRSF12Q8WXF0 261 aaKnown RBP3.41□□□□□ -1.86
SNX1-205ENST00000559339 SNAPC3Q92966 411 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 RAX2Q96IS3 184 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 USMG5Q96IX5 58 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 RHOVQ96L33 236 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 MS4A10Q96PG2 267 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 DUX3Q96PT4 197 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 OR5B12Q96R08 314 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 ZNF2Q9BSG1 426 aaPredicted RBP3.41□□□□□ -1.86
SNX1-205ENST00000559339 C6orf62Q9GZU0 229 aaPredicted RBP3.41□□□□□ -1.86
SNX1-205ENST00000559339 NAA50Q9GZZ1 169 aaKnown RBP3.41□□□□□ -1.86
SNX1-205ENST00000559339 KLK15Q9H2R5 256 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 RANGRFQ9HD47 186 aaPredicted RBP3.41□□□□□ -1.86
SNX1-205ENST00000559339 HRASLSQ9HDD0 168 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 CCL28Q9NRJ3 127 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 COA4Q9NYJ1 87 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 RABL2AQ9UBK7 228 aaPredicted RBP3.41□□□□□ -1.86
SNX1-205ENST00000559339 EXTL2Q9UBQ6 330 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms