RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 SLC35E3Q7Z769 313 aa7.64□□□□□ -1.19
SPG11-214ENST00000558989 R3HDM4Q96D70 268 aa7.64□□□□□ -1.19
SPG11-214ENST00000558989 ZNF479Q96JC4 524 aa7.64□□□□□ -1.19
SPG11-214ENST00000558989 RASL11BQ9BPW5 248 aa7.64□□□□□ -1.19
SPG11-214ENST00000558989 NABP2Q9BQ15 211 aa7.64□□□□□ -1.19
SPG11-214ENST00000558989 ST6GALNAC5Q9BVH7 336 aa7.64□□□□□ -1.19
SPG11-214ENST00000558989 RDH8Q9NYR8 311 aa7.64□□□□□ -1.19
SPG11-214ENST00000558989 NOTCH1P46531 2555 aa7.63□□□□□ -1.19
SPG11-214ENST00000558989 IGKV1D-8A0A087WSZ0 117 aa7.63□□□□□ -1.19
SPG11-214ENST00000558989 H7C2Y5 167 aa7.63□□□□□ -1.19
SPG11-214ENST00000558989 STAG3L2P0CL84 134 aa7.63□□□□□ -1.19
SPG11-214ENST00000558989 PTHLHP12272 177 aa7.63□□□□□ -1.19
SPG11-214ENST00000558989 UCP1P25874 307 aa7.63□□□□□ -1.19
SPG11-214ENST00000558989 Q8N9W7 124 aa7.63□□□□□ -1.19
SPG11-214ENST00000558989 WIPF2Q8TF74 440 aaPredicted RBP7.63□□□□□ -1.19
SPG11-214ENST00000558989 PHF21AQ96BD5 680 aa7.63□□□□□ -1.19
SPG11-214ENST00000558989 YIPF6Q96EC8 236 aa7.63□□□□□ -1.19
SPG11-214ENST00000558989 S1PR3Q99500 378 aa7.63□□□□□ -1.19
SPG11-214ENST00000558989 RHBDL2Q9NX52 303 aa7.63□□□□□ -1.19
SPG11-214ENST00000558989 PLA2G2EQ9NZK7 142 aa7.63□□□□□ -1.19
SPG11-214ENST00000558989 RBM7Q9Y580 266 aaKnown RBP7.63□□□□□ -1.19
SPG11-214ENST00000558989 TRAV18A0A075B6X5 111 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 TCRBV4S1A1TA0A5B7 111 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 PSMB11A5LHX3 300 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 RAB29O14966 203 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 DFFBO76075 338 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 OR8U9P0C7N5 309 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 RPS19P39019 145 aaKnown RBP7.62□□□□□ -1.19
SPG11-214ENST00000558989 GPR12P47775 334 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 NPBWR1P48145 328 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 SERPINB10P48595 397 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 ZNF137PP52743 207 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 GNG2P59768 71 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 ACTBP60709 375 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 VBP1P61758 197 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 EBI3Q14213 229 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 TCTEX1D4Q5JR98 221 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 LCNL1Q6ZST4 164 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 ZNF833PQ6ZTB9 187 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 Q8N6K4 173 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 OR8U1Q8NH10 309 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 OR10J5Q8NHC4 309 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 HSPB9Q9BQS6 159 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 ZNF251Q9BRH9 671 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 GINS4Q9BRT9 223 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 PIPOXQ9P0Z9 390 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 ZNF221Q9UK13 617 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 MGAT4AQ9UM21 535 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 MEIS3P1A6NDR6 274 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 FGF16O43320 207 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 CT45A6P0DMU7 189 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 CT45A5P0DMU8 189 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 CT45A7P0DMV0 189 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 FCGR2BP31994 310 aaPredicted RBP7.62□□□□□ -1.19
SPG11-214ENST00000558989 NCS1P62166 190 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 TIMM50Q3ZCQ8 353 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 SMUG1Q53HV7 270 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 FOXRED2Q8IWF2 684 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 OR4X2Q8NGF9 303 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 OR4A4PQ8NGN8 299 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 EDARADDQ8WWZ3 215 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 PTX4Q96A99 478 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 SLC25A38Q96DW6 304 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 CLCC1Q96S66 551 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 FUNDC2Q9BWH2 189 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 MAGT1Q9H0U3 335 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 OR2D2Q9H210 308 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 PLSCR3Q9NRY6 295 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 NDUFA13Q9P0J0 144 aa7.62□□□□□ -1.19
SPG11-214ENST00000558989 CBY3A6NI87 242 aa7.61□□□□□ -1.19
SPG11-214ENST00000558989 F8W735 103 aaPredicted RBP7.61□□□□□ -1.19
SPG11-214ENST00000558989 M0R1X1 148 aa7.61□□□□□ -1.19
SPG11-214ENST00000558989 ATP6V1G1O75348 118 aa7.61□□□□□ -1.19
SPG11-214ENST00000558989 SMIM18P0DKX4 95 aa7.61□□□□□ -1.19
SPG11-214ENST00000558989 SLAQ13239 276 aa7.61□□□□□ -1.19
SPG11-214ENST00000558989 KIR2DS1Q14954 304 aa7.61□□□□□ -1.19
SPG11-214ENST00000558989 PLGLAQ15195 96 aa7.61□□□□□ -1.19
SPG11-214ENST00000558989 USF2Q15853 346 aaPredicted RBP7.61□□□□□ -1.19
SPG11-214ENST00000558989 C18orf65Q6ZTR6 163 aa7.61□□□□□ -1.19
SPG11-214ENST00000558989 STPG3Q8N7X2 389 aa7.61□□□□□ -1.19
SPG11-214ENST00000558989 GLYATL2Q8WU03 294 aa7.61□□□□□ -1.19
SPG11-214ENST00000558989 AGMATQ9BSE5 352 aa7.61□□□□□ -1.19
SPG11-214ENST00000558989 NAA50Q9GZZ1 169 aaKnown RBP7.61□□□□□ -1.19
SPG11-214ENST00000558989 A0A0U1RRA0 63 aa7.6□□□□□ -1.19
SPG11-214ENST00000558989 WIPF1O43516 503 aa7.6□□□□□ -1.19
SPG11-214ENST00000558989 IGHG2P01859 326 aa7.6□□□□□ -1.19
SPG11-214ENST00000558989 NFYAP23511 347 aaPredicted RBP7.6□□□□□ -1.19
SPG11-214ENST00000558989 RAP2BP61225 183 aa7.6□□□□□ -1.19
SPG11-214ENST00000558989 DEFA6Q01524 100 aa7.6□□□□□ -1.19
SPG11-214ENST00000558989 ZNF260Q3ZCT1 412 aa7.6□□□□□ -1.19
SPG11-214ENST00000558989 HACD4Q5VWC8 232 aa7.6□□□□□ -1.19
SPG11-214ENST00000558989 NDUFA11Q86Y39 141 aa7.6□□□□□ -1.19
SPG11-214ENST00000558989 STPG2Q8N412 459 aa7.6□□□□□ -1.19
SPG11-214ENST00000558989 GVQW1Q8N7I0 195 aa7.6□□□□□ -1.19
SPG11-214ENST00000558989 NUDT10Q8NFP7 164 aa7.6□□□□□ -1.19
SPG11-214ENST00000558989 NUDT11Q96G61 164 aa7.6□□□□□ -1.19
SPG11-214ENST00000558989 ELOVL1Q9BW60 279 aa7.6□□□□□ -1.19
SPG11-214ENST00000558989 ABCG5Q9H222 651 aa7.6□□□□□ -1.19
SPG11-214ENST00000558989 FBXL15Q9H469 300 aa7.6□□□□□ -1.19
SPG11-214ENST00000558989 PARP11Q9NR21 331 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms