RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 DPPA5A6NC42 116 aa11.84□□□□□ -0.51
TPM1-211ENST00000558314 IZUMO1RA6ND01 250 aa11.84□□□□□ -0.51
TPM1-211ENST00000558314 HMX3A6NHT5 357 aa11.84□□□□□ -0.51
TPM1-211ENST00000558314 OR2J3O76001 311 aa11.84□□□□□ -0.51
TPM1-211ENST00000558314 DIRAS3O95661 229 aa11.84□□□□□ -0.51
TPM1-211ENST00000558314 CSN3P07498 182 aa11.84□□□□□ -0.51
TPM1-211ENST00000558314 DTYMKP23919 212 aa11.84□□□□□ -0.51
TPM1-211ENST00000558314 ARL6IP1Q15041 203 aa11.84□□□□□ -0.51
TPM1-211ENST00000558314 LCN12Q6JVE5 192 aa11.84□□□□□ -0.51
TPM1-211ENST00000558314 IL34Q6ZMJ4 242 aa11.84□□□□□ -0.51
TPM1-211ENST00000558314 FYTTD1Q96QD9 318 aaKnown RBP11.84□□□□□ -0.51
TPM1-211ENST00000558314 CENPOQ9BU64 300 aa11.84□□□□□ -0.51
TPM1-211ENST00000558314 PEMTQ9UBM1 199 aa11.84□□□□□ -0.51
TPM1-211ENST00000558314 MRPS7Q9Y2R9 242 aaKnown RBP11.84□□□□□ -0.51
TPM1-211ENST00000558314 RRP15Q9Y3B9 282 aaKnown RBP11.84□□□□□ -0.51
TPM1-211ENST00000558314 SELENOKQ9Y6D0 94 aa11.84□□□□□ -0.51
TPM1-211ENST00000558314 NOTOA8MTQ0 251 aa11.83□□□□□ -0.52
TPM1-211ENST00000558314 CREBL2O60519 120 aaPredicted RBP11.83□□□□□ -0.52
TPM1-211ENST00000558314 IGHV3-23P01764 117 aa11.83□□□□□ -0.52
TPM1-211ENST00000558314 FCER2P06734 321 aa11.83□□□□□ -0.52
TPM1-211ENST00000558314 CD36P16671 472 aa11.83□□□□□ -0.52
TPM1-211ENST00000558314 RPL30P62888 115 aaKnown RBP11.83□□□□□ -0.52
TPM1-211ENST00000558314 ZNF45Q02386 682 aa11.83□□□□□ -0.52
TPM1-211ENST00000558314 MXD1Q05195 221 aa11.83□□□□□ -0.52
TPM1-211ENST00000558314 CDK10Q15131 360 aa11.83□□□□□ -0.52
TPM1-211ENST00000558314 HACD4Q5VWC8 232 aa11.83□□□□□ -0.52
TPM1-211ENST00000558314 C19orf35Q6ZS72 473 aa11.83□□□□□ -0.52
TPM1-211ENST00000558314 SSX9Q7RTT3 188 aa11.83□□□□□ -0.52
TPM1-211ENST00000558314 MMD2Q8IY49 270 aa11.83□□□□□ -0.52
TPM1-211ENST00000558314 DYNLRB2Q8TF09 96 aa11.83□□□□□ -0.52
TPM1-211ENST00000558314 CITED4Q96RK1 184 aa11.83□□□□□ -0.52
TPM1-211ENST00000558314 GPHA2Q96T91 129 aa11.83□□□□□ -0.52
TPM1-211ENST00000558314 SPIN2AQ99865 258 aa11.83□□□□□ -0.52
TPM1-211ENST00000558314 SPIN2BQ9BPZ2 258 aa11.83□□□□□ -0.52
TPM1-211ENST00000558314 TM2D3Q9BRN9 247 aa11.83□□□□□ -0.52
TPM1-211ENST00000558314 C19orf73Q9NVV2 129 aa11.83□□□□□ -0.52
TPM1-211ENST00000558314 TXNL4BQ9NX01 149 aaKnown RBP11.83□□□□□ -0.52
TPM1-211ENST00000558314 TAS2R8Q9NYW2 309 aa11.83□□□□□ -0.52
TPM1-211ENST00000558314 RBMX2Q9Y388 322 aaKnown RBP11.83□□□□□ -0.52
TPM1-211ENST00000558314 OR2W1Q9Y3N9 320 aa11.83□□□□□ -0.52
TPM1-211ENST00000558314 IGKV1D-13A0A0B4J2D9 117 aa11.82□□□□□ -0.52
TPM1-211ENST00000558314 FAM223BA6NKX1 122 aa11.82□□□□□ -0.52
TPM1-211ENST00000558314 PPP5D1E7EU14 171 aa11.82□□□□□ -0.52
TPM1-211ENST00000558314 BMPR1BO00238 502 aa11.82□□□□□ -0.52
TPM1-211ENST00000558314 HLA-AP01891 365 aaKnown RBP11.82□□□□□ -0.52
TPM1-211ENST00000558314 CTXN2P0C2S0 81 aa11.82□□□□□ -0.52
TPM1-211ENST00000558314 IGKV1-13P0DP09 117 aa11.82□□□□□ -0.52
TPM1-211ENST00000558314 ARPC4P59998 168 aa11.82□□□□□ -0.52
TPM1-211ENST00000558314 HAGHQ16775 308 aa11.82□□□□□ -0.52
TPM1-211ENST00000558314 Q6ZS49 121 aa11.82□□□□□ -0.52
TPM1-211ENST00000558314 FAM223AQ8IWN6 122 aa11.82□□□□□ -0.52
TPM1-211ENST00000558314 Q8N402 240 aa11.82□□□□□ -0.52
TPM1-211ENST00000558314 LGALS14Q8TCE9 139 aa11.82□□□□□ -0.52
TPM1-211ENST00000558314 ISOC1Q96CN7 298 aa11.82□□□□□ -0.52
TPM1-211ENST00000558314 SPATA25Q9BR10 227 aa11.82□□□□□ -0.52
TPM1-211ENST00000558314 PLEKHA3Q9HB20 300 aa11.82□□□□□ -0.52
TPM1-211ENST00000558314 RAB26Q9ULW5 256 aa11.82□□□□□ -0.52
TPM1-211ENST00000558314 SSR3Q9UNL2 185 aa11.82□□□□□ -0.52
TPM1-211ENST00000558314 S4R3C0 116 aa11.82□□□□□ -0.52
TPM1-211ENST00000558314 TNFSF12O43508 249 aa11.81□□□□□ -0.52
TPM1-211ENST00000558314 OR2A4O95047 310 aa11.81□□□□□ -0.52
TPM1-211ENST00000558314 PTHLHP12272 177 aa11.81□□□□□ -0.52
TPM1-211ENST00000558314 CD81P60033 236 aa11.81□□□□□ -0.52
TPM1-211ENST00000558314 GABARAPL2P60520 117 aa11.81□□□□□ -0.52
TPM1-211ENST00000558314 GUCA2BQ16661 112 aa11.81□□□□□ -0.52
TPM1-211ENST00000558314 C15orf32Q32M92 178 aa11.81□□□□□ -0.52
TPM1-211ENST00000558314 CNIH2Q6PI25 160 aa11.81□□□□□ -0.52
TPM1-211ENST00000558314 OR4S2Q8NH73 311 aa11.81□□□□□ -0.52
TPM1-211ENST00000558314 OR51E2Q9H255 320 aa11.81□□□□□ -0.52
TPM1-211ENST00000558314 RETNQ9HD89 108 aa11.81□□□□□ -0.52
TPM1-211ENST00000558314 LOC100506127A0A0U1RQW1 187 aa11.8□□□□□ -0.52
TPM1-211ENST00000558314 BRI3O95415 125 aa11.8□□□□□ -0.52
TPM1-211ENST00000558314 HLA-DQB1P01920 261 aa11.8□□□□□ -0.52
TPM1-211ENST00000558314 IFNA6P05013 189 aa11.8□□□□□ -0.52
TPM1-211ENST00000558314 CLEC2LP0C7M8 214 aa11.8□□□□□ -0.52
TPM1-211ENST00000558314 RPL27AP46776 148 aaKnown RBP11.8□□□□□ -0.52
TPM1-211ENST00000558314 CD300EQ496F6 205 aaPredicted RBP11.8□□□□□ -0.52
TPM1-211ENST00000558314 UBE2UQ5VVX9 321 aa11.8□□□□□ -0.52
TPM1-211ENST00000558314 SFXN4Q6P4A7 337 aa11.8□□□□□ -0.52
TPM1-211ENST00000558314 SLC25A42Q86VD7 318 aa11.8□□□□□ -0.52
TPM1-211ENST00000558314 SPARTQ8N0X7 666 aa11.8□□□□□ -0.52
TPM1-211ENST00000558314 NECAP1Q8NC96 275 aa11.8□□□□□ -0.52
TPM1-211ENST00000558314 SECTM1Q8WVN6 248 aa11.8□□□□□ -0.52
TPM1-211ENST00000558314 DCSTAMPQ9H295 470 aa11.8□□□□□ -0.52
TPM1-211ENST00000558314 ANXA10Q9UJ72 324 aa11.8□□□□□ -0.52
TPM1-211ENST00000558314 FBXL7Q9UJT9 491 aa11.8□□□□□ -0.52
TPM1-211ENST00000558314 TRAV18A0A075B6X5 111 aa11.79□□□□□ -0.52
TPM1-211ENST00000558314 SSX5O60225 188 aa11.79□□□□□ -0.52
TPM1-211ENST00000558314 SLC22A5O76082 557 aa11.79□□□□□ -0.52
TPM1-211ENST00000558314 KBTBD11O94819 623 aa11.79□□□□□ -0.52
TPM1-211ENST00000558314 OR2C1O95371 312 aa11.79□□□□□ -0.52
TPM1-211ENST00000558314 REG1AP05451 166 aa11.79□□□□□ -0.52
TPM1-211ENST00000558314 EDN2P20800 178 aa11.79□□□□□ -0.52
TPM1-211ENST00000558314 GALP22466 123 aa11.79□□□□□ -0.52
TPM1-211ENST00000558314 SDC2P34741 201 aa11.79□□□□□ -0.52
TPM1-211ENST00000558314 IDNKQ5T6J7 187 aa11.79□□□□□ -0.52
TPM1-211ENST00000558314 MFSD4AQ8N468 514 aa11.79□□□□□ -0.52
TPM1-211ENST00000558314 TTC9CQ8N5M4 171 aa11.79□□□□□ -0.52
TPM1-211ENST00000558314 OR2A7Q96R45 310 aa11.79□□□□□ -0.52
TPM1-211ENST00000558314 FAM110AQ9BQ89 295 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms