RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 SLIRPQ9GZT3 109 aaKnown RBP7.06□□□□□ -1.28
SPG11-207ENST00000558138 FXYD6Q9H0Q3 95 aa7.06□□□□□ -1.28
SPG11-207ENST00000558138 ZFP57Q9NU63 452 aa7.06□□□□□ -1.28
SPG11-207ENST00000558138 ANAPC10Q9UM13 185 aa7.06□□□□□ -1.28
SPG11-207ENST00000558138 FOXA2Q9Y261 457 aaPredicted RBP7.06□□□□□ -1.28
SPG11-207ENST00000558138 DPPA5A6NC42 116 aa7.05□□□□□ -1.28
SPG11-207ENST00000558138 DISC1C4P0D8 188 aa7.05□□□□□ -1.28
SPG11-207ENST00000558138 TPPPO94811 219 aa7.05□□□□□ -1.28
SPG11-207ENST00000558138 OR2A4O95047 310 aa7.05□□□□□ -1.28
SPG11-207ENST00000558138 RAB3DO95716 219 aa7.05□□□□□ -1.28
SPG11-207ENST00000558138 IGLV2-14P01704 120 aa7.05□□□□□ -1.28
SPG11-207ENST00000558138 CD3DP04234 171 aa7.05□□□□□ -1.28
SPG11-207ENST00000558138 SAA1P0DJI8 122 aaPredicted RBP7.05□□□□□ -1.28
SPG11-207ENST00000558138 APELAP0DMC3 54 aa7.05□□□□□ -1.28
SPG11-207ENST00000558138 TBPP20226 339 aa7.05□□□□□ -1.28
SPG11-207ENST00000558138 INPP1P49441 399 aa7.05□□□□□ -1.28
SPG11-207ENST00000558138 TPPP2P59282 170 aa7.05□□□□□ -1.28
SPG11-207ENST00000558138 UBE2KP61086 200 aa7.05□□□□□ -1.28
SPG11-207ENST00000558138 NDPQ00604 133 aa7.05□□□□□ -1.28
SPG11-207ENST00000558138 TCTEX1D4Q5JR98 221 aa7.05□□□□□ -1.28
SPG11-207ENST00000558138 DHRS11Q6UWP2 260 aa7.05□□□□□ -1.28
SPG11-207ENST00000558138 ZNF562Q6V9R5 426 aa7.05□□□□□ -1.28
SPG11-207ENST00000558138 LYSMD2Q8IV50 215 aa7.05□□□□□ -1.28
SPG11-207ENST00000558138 ZNF695Q8IW36 515 aa7.05□□□□□ -1.28
SPG11-207ENST00000558138 SLC38A6Q8IZM9 456 aa7.05□□□□□ -1.28
SPG11-207ENST00000558138 VKORC1L1Q8N0U8 176 aa7.05□□□□□ -1.28
SPG11-207ENST00000558138 TCTEX1D1Q8N7M0 179 aa7.05□□□□□ -1.28
SPG11-207ENST00000558138 LFNGQ8NES3 379 aa7.05□□□□□ -1.28
SPG11-207ENST00000558138 CD300LFQ8TDQ1 290 aa7.05□□□□□ -1.28
SPG11-207ENST00000558138 WIPF2Q8TF74 440 aaPredicted RBP7.05□□□□□ -1.28
SPG11-207ENST00000558138 MS4A10Q96PG2 267 aa7.05□□□□□ -1.28
SPG11-207ENST00000558138 OR5B12Q96R08 314 aa7.05□□□□□ -1.28
SPG11-207ENST00000558138 OR2A7Q96R45 310 aa7.05□□□□□ -1.28
SPG11-207ENST00000558138 TINAGL1Q9GZM7 467 aaPredicted RBP7.05□□□□□ -1.28
SPG11-207ENST00000558138 COA4Q9NYJ1 87 aa7.05□□□□□ -1.28
SPG11-207ENST00000558138 MTFP1Q9UDX5 166 aa7.05□□□□□ -1.28
SPG11-207ENST00000558138 SRRM4A7MD48 611 aaKnown RBP7.04□□□□□ -1.28
SPG11-207ENST00000558138 HPRT1P00492 218 aa7.04□□□□□ -1.28
SPG11-207ENST00000558138 IGLV2-23P01705 113 aa7.04□□□□□ -1.28
SPG11-207ENST00000558138 IGHG4P01861 327 aa7.04□□□□□ -1.28
SPG11-207ENST00000558138 RPA2P15927 270 aa7.04□□□□□ -1.28
SPG11-207ENST00000558138 NQO2P16083 231 aa7.04□□□□□ -1.28
SPG11-207ENST00000558138 GNRHRP30968 328 aa7.04□□□□□ -1.28
SPG11-207ENST00000558138 TNFSF8P32971 234 aa7.04□□□□□ -1.28
SPG11-207ENST00000558138 SSBP1Q04837 148 aaKnown RBP7.04□□□□□ -1.28
SPG11-207ENST00000558138 PJVKQ0ZLH3 352 aa7.04□□□□□ -1.28
SPG11-207ENST00000558138 MEF2DQ14814 521 aa7.04□□□□□ -1.28
SPG11-207ENST00000558138 SPANXN2Q5MJ10 180 aa7.04□□□□□ -1.28
SPG11-207ENST00000558138 VAX1Q5SQQ9 334 aa7.04□□□□□ -1.28
SPG11-207ENST00000558138 STEAP1BQ6NZ63 245 aa7.04□□□□□ -1.28
SPG11-207ENST00000558138 C18orf65Q6ZTR6 163 aa7.04□□□□□ -1.28
SPG11-207ENST00000558138 C1QL4Q86Z23 238 aa7.04□□□□□ -1.28
SPG11-207ENST00000558138 MMD2Q8IY49 270 aa7.04□□□□□ -1.28
SPG11-207ENST00000558138 TMEM229BQ8NBD8 167 aa7.04□□□□□ -1.28
SPG11-207ENST00000558138 OR5T1Q8NG75 326 aa7.04□□□□□ -1.28
SPG11-207ENST00000558138 OR5M8Q8NGP6 311 aa7.04□□□□□ -1.28
SPG11-207ENST00000558138 CASTOR1Q8WTX7 329 aa7.04□□□□□ -1.28
SPG11-207ENST00000558138 SMIM4Q8WVI0 70 aa7.04□□□□□ -1.28
SPG11-207ENST00000558138 DUX3Q96PT4 197 aa7.04□□□□□ -1.28
SPG11-207ENST00000558138 FYTTD1Q96QD9 318 aaKnown RBP7.04□□□□□ -1.28
SPG11-207ENST00000558138 MCUBQ9NWR8 336 aa7.04□□□□□ -1.28
SPG11-207ENST00000558138 FBXO7Q9Y3I1 522 aa7.04□□□□□ -1.28
SPG11-207ENST00000558138 C13orf42A0A1B0GVH6 325 aa7.03□□□□□ -1.28
SPG11-207ENST00000558138 MSGN1A6NI15 193 aa7.03□□□□□ -1.28
SPG11-207ENST00000558138 ADARB2-AS1A8MUL3 147 aa7.03□□□□□ -1.28
SPG11-207ENST00000558138 ZNF701M0R085 212 aaPredicted RBP7.03□□□□□ -1.28
SPG11-207ENST00000558138 ARPC1BO15143 372 aaKnown RBP7.03□□□□□ -1.28
SPG11-207ENST00000558138 RAMP3O60896 148 aa7.03□□□□□ -1.28
SPG11-207ENST00000558138 PGLYRP1O75594 196 aaPredicted RBP7.03□□□□□ -1.28
SPG11-207ENST00000558138 KBTBD11O94819 623 aa7.03□□□□□ -1.28
SPG11-207ENST00000558138 S1PR2O95136 353 aa7.03□□□□□ -1.28
SPG11-207ENST00000558138 TRGV3P03979 118 aa7.03□□□□□ -1.28
SPG11-207ENST00000558138 AKAIN1P0CW23 69 aa7.03□□□□□ -1.28
SPG11-207ENST00000558138 SLC6A1P30531 599 aa7.03□□□□□ -1.28
SPG11-207ENST00000558138 RAB9AP51151 201 aa7.03□□□□□ -1.28
SPG11-207ENST00000558138 TAS2R31P59538 309 aa7.03□□□□□ -1.28
SPG11-207ENST00000558138 PRSS8Q16651 343 aa7.03□□□□□ -1.28
SPG11-207ENST00000558138 DEFB136Q30KP8 78 aa7.03□□□□□ -1.28
SPG11-207ENST00000558138 FAAP20Q6NZ36 180 aa7.03□□□□□ -1.28
SPG11-207ENST00000558138 TBC1D26Q86UD7 250 aa7.03□□□□□ -1.28
SPG11-207ENST00000558138 ARRDC1Q8N5I2 433 aa7.03□□□□□ -1.28
SPG11-207ENST00000558138 CCDC71LQ8N9Z2 235 aa7.03□□□□□ -1.28
SPG11-207ENST00000558138 RNASE11Q8TAA1 199 aaKnown RBP7.03□□□□□ -1.28
SPG11-207ENST00000558138 ZFAND1Q8TCF1 268 aa7.03□□□□□ -1.28
SPG11-207ENST00000558138 SRSF12Q8WXF0 261 aaKnown RBP7.03□□□□□ -1.28
SPG11-207ENST00000558138 DPF1Q92782 380 aa7.03□□□□□ -1.28
SPG11-207ENST00000558138 RHOVQ96L33 236 aa7.03□□□□□ -1.28
SPG11-207ENST00000558138 SPIN2AQ99865 258 aa7.03□□□□□ -1.28
SPG11-207ENST00000558138 SPIN2BQ9BPZ2 258 aa7.03□□□□□ -1.28
SPG11-207ENST00000558138 RBM38Q9H0Z9 239 aaKnown RBP7.03□□□□□ -1.28
SPG11-207ENST00000558138 ZNF430Q9H8G1 570 aaPredicted RBP7.03□□□□□ -1.28
SPG11-207ENST00000558138 NDUFA13Q9P0J0 144 aa7.03□□□□□ -1.28
SPG11-207ENST00000558138 COPZ2Q9P299 210 aa7.03□□□□□ -1.28
SPG11-207ENST00000558138 ZNF580Q9UK33 172 aa7.03□□□□□ -1.28
SPG11-207ENST00000558138 C14orf166Q9Y224 244 aaKnown RBP7.03□□□□□ -1.28
SPG11-207ENST00000558138 VSIG4Q9Y279 399 aa7.03□□□□□ -1.28
SPG11-207ENST00000558138 CCL24O00175 119 aa7.02□□□□□ -1.29
SPG11-207ENST00000558138 CTDSPLO15194 276 aa7.02□□□□□ -1.29
SPG11-207ENST00000558138 RBFOX2O43251 390 aaKnown RBP eCLIP7.02□□□□□ -1.29
SPG11-207ENST00000558138 RBMXL2O75526 392 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms