RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 OR51S1Q8NGJ8 323 aa11.29□□□□□ -0.6
USP3-205ENST00000557884 TERB2Q8NHR7 220 aa11.29□□□□□ -0.6
USP3-205ENST00000557884 MARCH1Q8TCQ1 289 aa11.29□□□□□ -0.6
USP3-205ENST00000557884 CHPT1Q8WUD6 406 aa11.29□□□□□ -0.6
USP3-205ENST00000557884 BATF3Q9NR55 127 aa11.29□□□□□ -0.6
USP3-205ENST00000557884 MCUBQ9NWR8 336 aa11.29□□□□□ -0.6
USP3-205ENST00000557884 SAA1P0DJI8 122 aaPredicted RBP11.28□□□□□ -0.6
USP3-205ENST00000557884 VDAC1P21796 283 aa11.28□□□□□ -0.6
USP3-205ENST00000557884 S100GP29377 79 aa11.28□□□□□ -0.6
USP3-205ENST00000557884 ECSCRQ19T08 205 aa11.28□□□□□ -0.6
USP3-205ENST00000557884 NSUN5P1Q3KNT7 163 aa11.28□□□□□ -0.6
USP3-205ENST00000557884 TCTEX1D4Q5JR98 221 aa11.28□□□□□ -0.6
USP3-205ENST00000557884 SSX9Q7RTT3 188 aa11.28□□□□□ -0.6
USP3-205ENST00000557884 TBC1D26Q86UD7 250 aa11.28□□□□□ -0.6
USP3-205ENST00000557884 PPP1R27Q86WC6 154 aa11.28□□□□□ -0.6
USP3-205ENST00000557884 OR13C8Q8NGS7 320 aa11.28□□□□□ -0.6
USP3-205ENST00000557884 GRPEL2Q8TAA5 225 aa11.28□□□□□ -0.6
USP3-205ENST00000557884 MRGPRFQ96AM1 343 aa11.28□□□□□ -0.6
USP3-205ENST00000557884 CITED2Q99967 270 aaPredicted RBP11.28□□□□□ -0.6
USP3-205ENST00000557884 FAM103A1Q9BTL3 118 aaKnown RBP11.28□□□□□ -0.6
USP3-205ENST00000557884 FBXO7Q9Y3I1 522 aa11.28□□□□□ -0.6
USP3-205ENST00000557884 VWFP04275 2813 aa11.28□□□□□ -0.6
USP3-205ENST00000557884 G3V318 75 aa11.27□□□□□ -0.61
USP3-205ENST00000557884 ARPC1BO15143 372 aaKnown RBP11.27□□□□□ -0.61
USP3-205ENST00000557884 S1PR2O95136 353 aa11.27□□□□□ -0.61
USP3-205ENST00000557884 CNIH1O95406 144 aa11.27□□□□□ -0.61
USP3-205ENST00000557884 RPA2P15927 270 aa11.27□□□□□ -0.61
USP3-205ENST00000557884 AP3S2P59780 193 aa11.27□□□□□ -0.61
USP3-205ENST00000557884 SLC35B1P78383 322 aa11.27□□□□□ -0.61
USP3-205ENST00000557884 SSBP2P81877 361 aaPredicted RBP11.27□□□□□ -0.61
USP3-205ENST00000557884 FXYD3Q14802 87 aa11.27□□□□□ -0.61
USP3-205ENST00000557884 BAK1Q16611 211 aa11.27□□□□□ -0.61
USP3-205ENST00000557884 KHDC1LQ5JSQ8 128 aa11.27□□□□□ -0.61
USP3-205ENST00000557884 TRIQKQ629K1 86 aa11.27□□□□□ -0.61
USP3-205ENST00000557884 ZNF57Q68EA5 555 aaPredicted RBP11.27□□□□□ -0.61
USP3-205ENST00000557884 TOMM5Q8N4H5 51 aa11.27□□□□□ -0.61
USP3-205ENST00000557884 GDPD1Q8N9F7 314 aa11.27□□□□□ -0.61
USP3-205ENST00000557884 TEX45Q8NA69 505 aa11.27□□□□□ -0.61
USP3-205ENST00000557884 OR4X2Q8NGF9 303 aa11.27□□□□□ -0.61
USP3-205ENST00000557884 ARPC1AQ92747 370 aa11.27□□□□□ -0.61
USP3-205ENST00000557884 HRASLSQ9HDD0 168 aa11.27□□□□□ -0.61
USP3-205ENST00000557884 SLC2A9Q9NRM0 540 aa11.27□□□□□ -0.61
USP3-205ENST00000557884 TRAV41A0A0B4J266 112 aa11.26□□□□□ -0.61
USP3-205ENST00000557884 LINC00854A0A1B0GVQ3 168 aa11.26□□□□□ -0.61
USP3-205ENST00000557884 A0A1W2PRX2 142 aa11.26□□□□□ -0.61
USP3-205ENST00000557884 TCRBV4S1A1TA0A5B7 111 aa11.26□□□□□ -0.61
USP3-205ENST00000557884 RBFOX2O43251 390 aaKnown RBP eCLIP11.26□□□□□ -0.619e-6■□□□□ 10.4
USP3-205ENST00000557884 IGF1P05019 195 aa11.26□□□□□ -0.61
USP3-205ENST00000557884 F2RP25116 425 aa11.26□□□□□ -0.61
USP3-205ENST00000557884 LPAR6P43657 344 aa11.26□□□□□ -0.61
USP3-205ENST00000557884 PIGPP57054 158 aa11.26□□□□□ -0.61
USP3-205ENST00000557884 PRSS8Q16651 343 aa11.26□□□□□ -0.61
USP3-205ENST00000557884 MRGPRG-AS1Q2M3A8 158 aa11.26□□□□□ -0.61
USP3-205ENST00000557884 ZNF562Q6V9R5 426 aa11.26□□□□□ -0.61
USP3-205ENST00000557884 LCNL1Q6ZST4 164 aa11.26□□□□□ -0.61
USP3-205ENST00000557884 ZFAND1Q8TCF1 268 aa11.26□□□□□ -0.61
USP3-205ENST00000557884 CD300LFQ8TDQ1 290 aa11.26□□□□□ -0.61
USP3-205ENST00000557884 RHOVQ96L33 236 aa11.26□□□□□ -0.61
USP3-205ENST00000557884 SDHCQ99643 169 aaPredicted RBP11.26□□□□□ -0.61
USP3-205ENST00000557884 PRRT1Q99946 306 aa11.26□□□□□ -0.61
USP3-205ENST00000557884 ZNF430Q9H8G1 570 aaPredicted RBP11.26□□□□□ -0.61
USP3-205ENST00000557884 PKD1L1Q8TDX9 2849 aa11.25□□□□□ -0.61
USP3-205ENST00000557884 MPPED1O15442 326 aa11.25□□□□□ -0.61
USP3-205ENST00000557884 OR2A4O95047 310 aa11.25□□□□□ -0.61
USP3-205ENST00000557884 HPRT1P00492 218 aa11.25□□□□□ -0.61
USP3-205ENST00000557884 HRASP01112 189 aa11.25□□□□□ -0.61
USP3-205ENST00000557884 EGR2P11161 476 aaPredicted RBP11.25□□□□□ -0.61
USP3-205ENST00000557884 FAUP35544 74 aaKnown RBP11.25□□□□□ -0.61
USP3-205ENST00000557884 INPP1P49441 399 aa11.25□□□□□ -0.61
USP3-205ENST00000557884 RND3P61587 244 aa11.25□□□□□ -0.61
USP3-205ENST00000557884 CFHR3Q02985 330 aa11.25□□□□□ -0.61
USP3-205ENST00000557884 TNXAQ16473 311 aa11.25□□□□□ -0.61
USP3-205ENST00000557884 ZNF585BQ52M93 769 aa11.25□□□□□ -0.61
USP3-205ENST00000557884 C10orf55Q5SWW7 151 aa11.25□□□□□ -0.61
USP3-205ENST00000557884 ZNF486Q96H40 463 aaPredicted RBP11.25□□□□□ -0.61
USP3-205ENST00000557884 OR2A7Q96R45 310 aa11.25□□□□□ -0.61
USP3-205ENST00000557884 GON7Q9BXV9 100 aa11.25□□□□□ -0.61
USP3-205ENST00000557884 AKIP1Q9NQ31 210 aa11.25□□□□□ -0.61
USP3-205ENST00000557884 SLC2A8Q9NY64 477 aa11.25□□□□□ -0.61
USP3-205ENST00000557884 PTTG2Q9NZH5 202 aa11.25□□□□□ -0.61
USP3-205ENST00000557884 COPZ2Q9P299 210 aa11.25□□□□□ -0.61
USP3-205ENST00000557884 SCP2D1Q9UJQ7 156 aa11.25□□□□□ -0.61
USP3-205ENST00000557884 M0QZ24 198 aa11.24□□□□□ -0.61
USP3-205ENST00000557884 KBTBD11O94819 623 aa11.24□□□□□ -0.61
USP3-205ENST00000557884 TSPAN15O95858 294 aa11.24□□□□□ -0.61
USP3-205ENST00000557884 CTSDP07339 412 aaPredicted RBP11.24□□□□□ -0.61
USP3-205ENST00000557884 APELAP0DMC3 54 aa11.24□□□□□ -0.61
USP3-205ENST00000557884 NQO2P16083 231 aa11.24□□□□□ -0.61
USP3-205ENST00000557884 ECI1P42126 302 aa11.24□□□□□ -0.61
USP3-205ENST00000557884 TAS2R31P59538 309 aa11.24□□□□□ -0.61
USP3-205ENST00000557884 CD83Q01151 205 aa11.24□□□□□ -0.61
USP3-205ENST00000557884 ZNF45Q02386 682 aa11.24□□□□□ -0.61
USP3-205ENST00000557884 OR4A47Q6IF82 309 aa11.24□□□□□ -0.61
USP3-205ENST00000557884 TEX38Q6PEX7 206 aa11.24□□□□□ -0.61
USP3-205ENST00000557884 UNQ5815/PRO19632Q6UWF5 114 aa11.24□□□□□ -0.61
USP3-205ENST00000557884 PUSL1Q8N0Z8 303 aaKnown RBP11.24□□□□□ -0.61
USP3-205ENST00000557884 LFNGQ8NES3 379 aa11.24□□□□□ -0.61
USP3-205ENST00000557884 DMBX1Q8NFW5 382 aa11.24□□□□□ -0.61
USP3-205ENST00000557884 VSTM2AQ8TAG5 236 aa11.24□□□□□ -0.61
USP3-205ENST00000557884 R3HDM4Q96D70 268 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms