RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 MINDY2Q8NBR6 621 aa9.78□□□□□ -0.84
SLIRP-211ENST00000557623 KLHL30-AS1Q8NEE0 82 aa9.78□□□□□ -0.84
SLIRP-211ENST00000557623 FCAMRQ8WWV6 532 aa9.78□□□□□ -0.84
SLIRP-211ENST00000557623 ARPC1AQ92747 370 aa9.78□□□□□ -0.84
SLIRP-211ENST00000557623 AIFM2Q9BRQ8 373 aa9.78□□□□□ -0.84
SLIRP-211ENST00000557623 TPSG1Q9NRR2 321 aa9.78□□□□□ -0.84
SLIRP-211ENST00000557623 FOXA2Q9Y261 457 aaPredicted RBP9.78□□□□□ -0.84
SLIRP-211ENST00000557623 NUBP2Q9Y5Y2 271 aa9.78□□□□□ -0.84
SLIRP-211ENST00000557623 TRRAPQ9Y4A5 3859 aa9.78□□□□□ -0.84
SLIRP-211ENST00000557623 A0A1W2PN81 502 aa9.77□□□□□ -0.85
SLIRP-211ENST00000557623 TNFSF12O43508 249 aa9.77□□□□□ -0.85
SLIRP-211ENST00000557623 IGLV1-40P01703 118 aa9.77□□□□□ -0.85
SLIRP-211ENST00000557623 EGR2P11161 476 aaPredicted RBP9.77□□□□□ -0.85
SLIRP-211ENST00000557623 TBPP20226 339 aa9.77□□□□□ -0.85
SLIRP-211ENST00000557623 CD40LGP29965 261 aa9.77□□□□□ -0.85
SLIRP-211ENST00000557623 CHRNA7P36544 502 aa9.77□□□□□ -0.85
SLIRP-211ENST00000557623 CDX1P47902 265 aaPredicted RBP9.77□□□□□ -0.85
SLIRP-211ENST00000557623 C19orf54Q5BKX5 351 aa9.77□□□□□ -0.85
SLIRP-211ENST00000557623 OR2B11Q5JQS5 317 aa9.77□□□□□ -0.85
SLIRP-211ENST00000557623 VAX1Q5SQQ9 334 aa9.77□□□□□ -0.85
SLIRP-211ENST00000557623 LPCAT3Q6P1A2 487 aa9.77□□□□□ -0.85
SLIRP-211ENST00000557623 UNQ5815/PRO19632Q6UWF5 114 aa9.77□□□□□ -0.85
SLIRP-211ENST00000557623 ZNF818PQ6ZRF7 136 aa9.77□□□□□ -0.85
SLIRP-211ENST00000557623 OR5M8Q8NGP6 311 aa9.77□□□□□ -0.85
SLIRP-211ENST00000557623 OR52I2Q8NH67 350 aa9.77□□□□□ -0.85
SLIRP-211ENST00000557623 VSTM2AQ8TAG5 236 aa9.77□□□□□ -0.85
SLIRP-211ENST00000557623 CD300LFQ8TDQ1 290 aa9.77□□□□□ -0.85
SLIRP-211ENST00000557623 DIRAS2Q96HU8 199 aa9.77□□□□□ -0.85
SLIRP-211ENST00000557623 TMEM68Q96MH6 324 aa9.77□□□□□ -0.85
SLIRP-211ENST00000557623 ABHD1Q96SE0 405 aa9.77□□□□□ -0.85
SLIRP-211ENST00000557623 SLIRPQ9GZT3 109 aaKnown RBP9.77□□□□□ -0.85
SLIRP-211ENST00000557623 C6orf62Q9GZU0 229 aaPredicted RBP9.77□□□□□ -0.85
SLIRP-211ENST00000557623 MTFP1Q9UDX5 166 aa9.77□□□□□ -0.85
SLIRP-211ENST00000557623 FBXO7Q9Y3I1 522 aa9.77□□□□□ -0.85
SLIRP-211ENST00000557623 A3GALT2U3KPV4 340 aa9.77□□□□□ -0.85
SLIRP-211ENST00000557623 GABARAPH6UMI1 98 aa9.76□□□□□ -0.85
SLIRP-211ENST00000557623 ZNF701M0R085 212 aaPredicted RBP9.76□□□□□ -0.85
SLIRP-211ENST00000557623 ARPC1BO15143 372 aaKnown RBP9.76□□□□□ -0.85
SLIRP-211ENST00000557623 RBFOX2O43251 390 aaKnown RBP eCLIP9.76□□□□□ -0.85
SLIRP-211ENST00000557623 ACTL6BO94805 426 aa9.76□□□□□ -0.85
SLIRP-211ENST00000557623 HRASP01112 189 aa9.76□□□□□ -0.85
SLIRP-211ENST00000557623 IFNA6P05013 189 aa9.76□□□□□ -0.85
SLIRP-211ENST00000557623 S100GP29377 79 aa9.76□□□□□ -0.85
SLIRP-211ENST00000557623 GNRHRP30968 328 aa9.76□□□□□ -0.85
SLIRP-211ENST00000557623 MYCNOSP40205 109 aa9.76□□□□□ -0.85
SLIRP-211ENST00000557623 GNB1P62873 340 aa9.76□□□□□ -0.85
SLIRP-211ENST00000557623 SSBP1Q04837 148 aaKnown RBP9.76□□□□□ -0.85
SLIRP-211ENST00000557623 IL18Q14116 193 aa9.76□□□□□ -0.85
SLIRP-211ENST00000557623 PRSS8Q16651 343 aa9.76□□□□□ -0.85
SLIRP-211ENST00000557623 RNASE12Q5GAN4 147 aaKnown RBP9.76□□□□□ -0.85
SLIRP-211ENST00000557623 AADACL3Q5VUY0 350 aa9.76□□□□□ -0.85
SLIRP-211ENST00000557623 CMTM1Q8IZ96 169 aa9.76□□□□□ -0.85
SLIRP-211ENST00000557623 POC5Q8NA72 575 aa9.76□□□□□ -0.85
SLIRP-211ENST00000557623 LFNGQ8NES3 379 aa9.76□□□□□ -0.85
SLIRP-211ENST00000557623 MCFD2Q8NI22 146 aa9.76□□□□□ -0.85
SLIRP-211ENST00000557623 GRPEL2Q8TAA5 225 aa9.76□□□□□ -0.85
SLIRP-211ENST00000557623 FAM103A1Q9BTL3 118 aaKnown RBP9.76□□□□□ -0.85
SLIRP-211ENST00000557623 KLK11Q9UBX7 282 aa9.76□□□□□ -0.85
SLIRP-211ENST00000557623 RSL24D1Q9UHA3 163 aaKnown RBP9.76□□□□□ -0.85
SLIRP-211ENST00000557623 GPR31O00270 319 aa9.75□□□□□ -0.85
SLIRP-211ENST00000557623 CTDSPLO15194 276 aa9.75□□□□□ -0.85
SLIRP-211ENST00000557623 HPRT1P00492 218 aa9.75□□□□□ -0.85
SLIRP-211ENST00000557623 SAA1P0DJI8 122 aaPredicted RBP9.75□□□□□ -0.85
SLIRP-211ENST00000557623 RAB9AP51151 201 aa9.75□□□□□ -0.85
SLIRP-211ENST00000557623 TAS2R19P59542 299 aa9.75□□□□□ -0.85
SLIRP-211ENST00000557623 TNXAQ16473 311 aa9.75□□□□□ -0.85
SLIRP-211ENST00000557623 RNASE10Q5GAN6 216 aaKnown RBP9.75□□□□□ -0.85
SLIRP-211ENST00000557623 LCNL1Q6ZST4 164 aa9.75□□□□□ -0.85
SLIRP-211ENST00000557623 C18orf65Q6ZTR6 163 aa9.75□□□□□ -0.85
SLIRP-211ENST00000557623 MMD2Q8IY49 270 aa9.75□□□□□ -0.85
SLIRP-211ENST00000557623 SPAG16Q8N0X2 631 aa9.75□□□□□ -0.85
SLIRP-211ENST00000557623 ZNF491Q8N8L2 437 aa9.75□□□□□ -0.85
SLIRP-211ENST00000557623 TMEM229BQ8NBD8 167 aa9.75□□□□□ -0.85
SLIRP-211ENST00000557623 WFDC9Q8NEX5 89 aa9.75□□□□□ -0.85
SLIRP-211ENST00000557623 MYOZ3Q8TDC0 251 aa9.75□□□□□ -0.85
SLIRP-211ENST00000557623 C4orf3Q8WVX3 66 aa9.75□□□□□ -0.85
SLIRP-211ENST00000557623 UBE2E2Q96LR5 201 aa9.75□□□□□ -0.85
SLIRP-211ENST00000557623 GPHA2Q96T91 129 aa9.75□□□□□ -0.85
SLIRP-211ENST00000557623 PHB2Q99623 299 aa9.75□□□□□ -0.85
SLIRP-211ENST00000557623 NXF2Q9GZY0 626 aaKnown RBP9.75□□□□□ -0.85
SLIRP-211ENST00000557623 FXYD6Q9H0Q3 95 aa9.75□□□□□ -0.85
SLIRP-211ENST00000557623 H3BUA1 57 aa9.74□□□□□ -0.85
SLIRP-211ENST00000557623 PGLYRP1O75594 196 aaPredicted RBP9.74□□□□□ -0.85
SLIRP-211ENST00000557623 OR2A4O95047 310 aa9.74□□□□□ -0.85
SLIRP-211ENST00000557623 DUS4LO95620 317 aaKnown RBP9.74□□□□□ -0.85
SLIRP-211ENST00000557623 UCP3P55916 312 aa9.74□□□□□ -0.85
SLIRP-211ENST00000557623 BRWD1-AS2P59051 145 aa9.74□□□□□ -0.85
SLIRP-211ENST00000557623 TAS2R31P59538 309 aa9.74□□□□□ -0.85
SLIRP-211ENST00000557623 SSBP2P81877 361 aaPredicted RBP9.74□□□□□ -0.85
SLIRP-211ENST00000557623 PJVKQ0ZLH3 352 aa9.74□□□□□ -0.85
SLIRP-211ENST00000557623 IDO2Q6ZQW0 420 aa9.74□□□□□ -0.85
SLIRP-211ENST00000557623 SLC38A6Q8IZM9 456 aa9.74□□□□□ -0.85
SLIRP-211ENST00000557623 ARRDC1Q8N5I2 433 aa9.74□□□□□ -0.85
SLIRP-211ENST00000557623 OR51H1Q8NH63 302 aa9.74□□□□□ -0.85
SLIRP-211ENST00000557623 RHOVQ96L33 236 aa9.74□□□□□ -0.85
SLIRP-211ENST00000557623 OR2A7Q96R45 310 aa9.74□□□□□ -0.85
SLIRP-211ENST00000557623 MRPL18Q9H0U6 180 aaKnown RBP9.74□□□□□ -0.85
SLIRP-211ENST00000557623 RBM38Q9H0Z9 239 aaKnown RBP9.74□□□□□ -0.85
SLIRP-211ENST00000557623 KLK15Q9H2R5 256 aa9.74□□□□□ -0.85
SLIRP-211ENST00000557623 SLA2Q9H6Q3 261 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms