RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 HIST2H2BDQ6DRA6 164 aa11.71□□□□□ -0.53
VIPAS39-210ENST00000557466 C10orf99Q6UWK7 81 aa11.71□□□□□ -0.53
VIPAS39-210ENST00000557466 IDO2Q6ZQW0 420 aa11.71□□□□□ -0.53
VIPAS39-210ENST00000557466 TBC1D26Q86UD7 250 aa11.71□□□□□ -0.53
VIPAS39-210ENST00000557466 VKORC1L1Q8N0U8 176 aa11.71□□□□□ -0.53
VIPAS39-210ENST00000557466 ZNF486Q96H40 463 aaPredicted RBP11.71□□□□□ -0.53
VIPAS39-210ENST00000557466 CLCC1Q96S66 551 aa11.71□□□□□ -0.53
VIPAS39-210ENST00000557466 CITED1Q99966 193 aa11.71□□□□□ -0.53
VIPAS39-210ENST00000557466 OR51J1Q9H342 316 aa11.71□□□□□ -0.53
VIPAS39-210ENST00000557466 PARP11Q9NR21 331 aa11.71□□□□□ -0.53
VIPAS39-210ENST00000557466 ATP6V0E1O15342 81 aa11.7□□□□□ -0.54
VIPAS39-210ENST00000557466 S1PR2O95136 353 aa11.7□□□□□ -0.54
VIPAS39-210ENST00000557466 CTSDP07339 412 aaPredicted RBP11.7□□□□□ -0.54
VIPAS39-210ENST00000557466 F2RP25116 425 aa11.7□□□□□ -0.54
VIPAS39-210ENST00000557466 ECI1P42126 302 aa11.7□□□□□ -0.54
VIPAS39-210ENST00000557466 INPP1P49441 399 aa11.7□□□□□ -0.54
VIPAS39-210ENST00000557466 PIGPP57054 158 aa11.7□□□□□ -0.54
VIPAS39-210ENST00000557466 CX3CL1P78423 397 aa11.7□□□□□ -0.54
VIPAS39-210ENST00000557466 SSBP2P81877 361 aaPredicted RBP11.7□□□□□ -0.54
VIPAS39-210ENST00000557466 SURF2Q15527 256 aaPredicted RBP11.7□□□□□ -0.54
VIPAS39-210ENST00000557466 MRGPRG-AS1Q2M3A8 158 aa11.7□□□□□ -0.54
VIPAS39-210ENST00000557466 SHISA2Q6UWI4 295 aa11.7□□□□□ -0.54
VIPAS39-210ENST00000557466 PPP1R27Q86WC6 154 aa11.7□□□□□ -0.54
VIPAS39-210ENST00000557466 STPG2Q8N412 459 aa11.7□□□□□ -0.54
VIPAS39-210ENST00000557466 C11orf44Q8N8P7 122 aa11.7□□□□□ -0.54
VIPAS39-210ENST00000557466 TEX45Q8NA69 505 aa11.7□□□□□ -0.54
VIPAS39-210ENST00000557466 POC5Q8NA72 575 aa11.7□□□□□ -0.54
VIPAS39-210ENST00000557466 ZFAND1Q8TCF1 268 aa11.7□□□□□ -0.54
VIPAS39-210ENST00000557466 SCP2D1Q9UJQ7 156 aa11.7□□□□□ -0.54
VIPAS39-210ENST00000557466 FBXO7Q9Y3I1 522 aa11.7□□□□□ -0.54
VIPAS39-210ENST00000557466 TET2Q6N021 2002 aaPredicted RBP11.7□□□□□ -0.54
VIPAS39-210ENST00000557466 HPRT1P00492 218 aa11.69□□□□□ -0.54
VIPAS39-210ENST00000557466 PJVKQ0ZLH3 352 aa11.69□□□□□ -0.54
VIPAS39-210ENST00000557466 ZNF585BQ52M93 769 aa11.69□□□□□ -0.54
VIPAS39-210ENST00000557466 SSX9Q7RTT3 188 aa11.69□□□□□ -0.54
VIPAS39-210ENST00000557466 CD300LFQ8TDQ1 290 aa11.69□□□□□ -0.54
VIPAS39-210ENST00000557466 CHPT1Q8WUD6 406 aa11.69□□□□□ -0.54
VIPAS39-210ENST00000557466 DEDD2Q8WXF8 326 aa11.69□□□□□ -0.54
VIPAS39-210ENST00000557466 S100ZQ8WXG8 99 aa11.69□□□□□ -0.54
VIPAS39-210ENST00000557466 COMMD9Q9P000 198 aa11.69□□□□□ -0.54
VIPAS39-210ENST00000557466 ZNF580Q9UK33 172 aa11.69□□□□□ -0.54
VIPAS39-210ENST00000557466 C14orf166Q9Y224 244 aaKnown RBP11.69□□□□□ -0.54
VIPAS39-210ENST00000557466 TENM1Q9UKZ4 2725 aa11.68□□□□□ -0.54
VIPAS39-210ENST00000557466 LINC00854A0A1B0GVQ3 168 aa11.68□□□□□ -0.54
VIPAS39-210ENST00000557466 PSMB11A5LHX3 300 aa11.68□□□□□ -0.54
VIPAS39-210ENST00000557466 ARPC1BO15143 372 aaKnown RBP11.68□□□□□ -0.54
VIPAS39-210ENST00000557466 MPPED1O15442 326 aa11.68□□□□□ -0.54
VIPAS39-210ENST00000557466 FBXO24O75426 580 aa11.68□□□□□ -0.54
VIPAS39-210ENST00000557466 HRASP01112 189 aa11.68□□□□□ -0.54
VIPAS39-210ENST00000557466 IGF1P05019 195 aa11.68□□□□□ -0.54
VIPAS39-210ENST00000557466 CD28P10747 220 aa11.68□□□□□ -0.54
VIPAS39-210ENST00000557466 LPAR6P43657 344 aa11.68□□□□□ -0.54
VIPAS39-210ENST00000557466 GNB1P62873 340 aa11.68□□□□□ -0.54
VIPAS39-210ENST00000557466 CENPVQ7Z7K6 275 aaPredicted RBP11.68□□□□□ -0.54
VIPAS39-210ENST00000557466 ZNF329Q86UD4 541 aa11.68□□□□□ -0.54
VIPAS39-210ENST00000557466 PUSL1Q8N0Z8 303 aaKnown RBP11.68□□□□□ -0.54
VIPAS39-210ENST00000557466 TCTEX1D1Q8N7M0 179 aa11.68□□□□□ -0.54
VIPAS39-210ENST00000557466 CCDC71LQ8N9Z2 235 aa11.68□□□□□ -0.54
VIPAS39-210ENST00000557466 OR5AU1Q8NGC0 362 aa11.68□□□□□ -0.54
VIPAS39-210ENST00000557466 RHOVQ96L33 236 aa11.68□□□□□ -0.54
VIPAS39-210ENST00000557466 RTBDNQ9BSG5 229 aaPredicted RBP11.68□□□□□ -0.54
VIPAS39-210ENST00000557466 C5orf66Q9H5L9 145 aa11.68□□□□□ -0.54
VIPAS39-210ENST00000557466 PLEKHA2Q9HB19 425 aa11.68□□□□□ -0.54
VIPAS39-210ENST00000557466 COPZ2Q9P299 210 aa11.68□□□□□ -0.54
VIPAS39-210ENST00000557466 GPR132Q9UNW8 380 aa11.68□□□□□ -0.54
VIPAS39-210ENST00000557466 VSIG4Q9Y279 399 aa11.68□□□□□ -0.54
VIPAS39-210ENST00000557466 G3V318 75 aa11.67□□□□□ -0.54
VIPAS39-210ENST00000557466 KBTBD11O94819 623 aa11.67□□□□□ -0.54
VIPAS39-210ENST00000557466 EGR2P11161 476 aaPredicted RBP11.67□□□□□ -0.54
VIPAS39-210ENST00000557466 NQO2P16083 231 aa11.67□□□□□ -0.54
VIPAS39-210ENST00000557466 VDAC1P21796 283 aa11.67□□□□□ -0.54
VIPAS39-210ENST00000557466 TAS2R31P59538 309 aa11.67□□□□□ -0.54
VIPAS39-210ENST00000557466 CFHR3Q02985 330 aa11.67□□□□□ -0.54
VIPAS39-210ENST00000557466 POU2AF1Q16633 256 aa11.67□□□□□ -0.54
VIPAS39-210ENST00000557466 PRSS8Q16651 343 aa11.67□□□□□ -0.54
VIPAS39-210ENST00000557466 OR4A47Q6IF82 309 aa11.67□□□□□ -0.54
VIPAS39-210ENST00000557466 ZNF562Q6V9R5 426 aa11.67□□□□□ -0.54
VIPAS39-210ENST00000557466 ABHD5Q8WTS1 349 aa11.67□□□□□ -0.54
VIPAS39-210ENST00000557466 ARPC1AQ92747 370 aa11.67□□□□□ -0.54
VIPAS39-210ENST00000557466 R3HDM4Q96D70 268 aa11.67□□□□□ -0.54
VIPAS39-210ENST00000557466 TP53RKQ96S44 253 aa11.67□□□□□ -0.54
VIPAS39-210ENST00000557466 FAM103A1Q9BTL3 118 aaKnown RBP11.67□□□□□ -0.54
VIPAS39-210ENST00000557466 CCDC32Q9BV29 185 aa11.67□□□□□ -0.54
VIPAS39-210ENST00000557466 ZNF430Q9H8G1 570 aaPredicted RBP11.67□□□□□ -0.54
VIPAS39-210ENST00000557466 FAM212BQ9NTI7 297 aaPredicted RBP11.67□□□□□ -0.54
VIPAS39-210ENST00000557466 WSB1Q9Y6I7 421 aa11.67□□□□□ -0.54
VIPAS39-210ENST00000557466 TNCP24821 2201 aa11.67□□□□□ -0.54
VIPAS39-210ENST00000557466 H0Y980 276 aa11.66□□□□□ -0.54
VIPAS39-210ENST00000557466 OR2A4O95047 310 aa11.66□□□□□ -0.54
VIPAS39-210ENST00000557466 RPA2P15927 270 aa11.66□□□□□ -0.54
VIPAS39-210ENST00000557466 CD40LGP29965 261 aa11.66□□□□□ -0.54
VIPAS39-210ENST00000557466 CRIP2P52943 208 aaPredicted RBP11.66□□□□□ -0.54
VIPAS39-210ENST00000557466 FXYD3Q14802 87 aa11.66□□□□□ -0.54
VIPAS39-210ENST00000557466 TNXAQ16473 311 aa11.66□□□□□ -0.54
VIPAS39-210ENST00000557466 ECSCRQ19T08 205 aa11.66□□□□□ -0.54
VIPAS39-210ENST00000557466 C19orf54Q5BKX5 351 aa11.66□□□□□ -0.54
VIPAS39-210ENST00000557466 TCTEX1D4Q5JR98 221 aa11.66□□□□□ -0.54
VIPAS39-210ENST00000557466 OR4X2Q8NGF9 303 aa11.66□□□□□ -0.54
VIPAS39-210ENST00000557466 GRPEL2Q8TAA5 225 aa11.66□□□□□ -0.54
VIPAS39-210ENST00000557466 VSTM2AQ8TAG5 236 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms