RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 TMEM272A0A1B0GTI8 110 aa10.59□□□□□ -0.71
SLIRP-210ENST00000557431 C2orf70A6NJV1 201 aa10.59□□□□□ -0.71
SLIRP-210ENST00000557431 FCGR3AP08637 254 aa10.59□□□□□ -0.71
SLIRP-210ENST00000557431 SAA1P0DJI8 122 aaPredicted RBP10.59□□□□□ -0.71
SLIRP-210ENST00000557431 ATP5G2Q06055 141 aa10.59□□□□□ -0.71
SLIRP-210ENST00000557431 TBCEQ15813 527 aaPredicted RBP10.59□□□□□ -0.71
SLIRP-210ENST00000557431 RTL8BQ17RB0 113 aa10.59□□□□□ -0.71
SLIRP-210ENST00000557431 DEFB114Q30KQ6 69 aa10.59□□□□□ -0.71
SLIRP-210ENST00000557431 C2orf76Q3KRA6 126 aa10.59□□□□□ -0.71
SLIRP-210ENST00000557431 DDB2Q92466 427 aa10.59□□□□□ -0.71
SLIRP-210ENST00000557431 FAM3DQ96BQ1 224 aa10.59□□□□□ -0.71
SLIRP-210ENST00000557431 MGLLQ99685 303 aa10.59□□□□□ -0.71
SLIRP-210ENST00000557431 ELF5Q9UKW6 265 aaPredicted RBP10.59□□□□□ -0.71
SLIRP-210ENST00000557431 KMT2AQ03164 3969 aa10.58□□□□□ -0.71
SLIRP-210ENST00000557431 TRBV6-7A0A0A0MS04 114 aa10.58□□□□□ -0.72
SLIRP-210ENST00000557431 OR2C1O95371 312 aa10.58□□□□□ -0.72
SLIRP-210ENST00000557431 FOLR2P14207 255 aa10.58□□□□□ -0.72
SLIRP-210ENST00000557431 GNB3P16520 340 aa10.58□□□□□ -0.72
SLIRP-210ENST00000557431 DUTP33316 252 aaKnown RBP10.58□□□□□ -0.72
SLIRP-210ENST00000557431 GABARAPL2P60520 117 aa10.58□□□□□ -0.72
SLIRP-210ENST00000557431 UBE2KP61086 200 aa10.58□□□□□ -0.72
SLIRP-210ENST00000557431 EWSR1Q01844 656 aaKnown RBP eCLIP10.58□□□□□ -0.72
SLIRP-210ENST00000557431 CBX3Q13185 183 aa10.58□□□□□ -0.72
SLIRP-210ENST00000557431 TRAM1Q15629 374 aa10.58□□□□□ -0.72
SLIRP-210ENST00000557431 VMA21Q3ZAQ7 101 aa10.58□□□□□ -0.72
SLIRP-210ENST00000557431 VKORC1L1Q8N0U8 176 aa10.58□□□□□ -0.72
SLIRP-210ENST00000557431 OR2K2Q8NGT1 345 aa10.58□□□□□ -0.72
SLIRP-210ENST00000557431 OR10J5Q8NHC4 309 aa10.58□□□□□ -0.72
SLIRP-210ENST00000557431 LINC00476Q8WZB0 136 aa10.58□□□□□ -0.72
SLIRP-210ENST00000557431 ACOT13Q9NPJ3 140 aa10.58□□□□□ -0.72
SLIRP-210ENST00000557431 DMRT1Q9Y5R6 373 aa10.58□□□□□ -0.72
SLIRP-210ENST00000557431 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.57□□□□□ -0.72
SLIRP-210ENST00000557431 TRBV9A0A0B4J1U6 114 aa10.57□□□□□ -0.72
SLIRP-210ENST00000557431 E7EUB6 86 aa10.57□□□□□ -0.72
SLIRP-210ENST00000557431 MRPS14O60783 128 aaKnown RBP10.57□□□□□ -0.72
SLIRP-210ENST00000557431 LY6G6CO95867 125 aa10.57□□□□□ -0.72
SLIRP-210ENST00000557431 MYOD1P15172 320 aa10.57□□□□□ -0.72
SLIRP-210ENST00000557431 PSMA1P25786 263 aaKnown RBP10.57□□□□□ -0.72
SLIRP-210ENST00000557431 ZNF367Q7RTV3 350 aa10.57□□□□□ -0.72
SLIRP-210ENST00000557431 TEX45Q8NA69 505 aa10.57□□□□□ -0.72
SLIRP-210ENST00000557431 OR56B1Q8NGI3 324 aa10.57□□□□□ -0.72
SLIRP-210ENST00000557431 IL17DQ8TAD2 202 aa10.57□□□□□ -0.72
SLIRP-210ENST00000557431 GINS4Q9BRT9 223 aa10.57□□□□□ -0.72
SLIRP-210ENST00000557431 YTHDF1Q9BYJ9 559 aaKnown RBP10.57□□□□□ -0.72
SLIRP-210ENST00000557431 ZC4H2Q9NQZ6 224 aa10.57□□□□□ -0.72
SLIRP-210ENST00000557431 FAM223BA6NKX1 122 aa10.56□□□□□ -0.72
SLIRP-210ENST00000557431 TUSC2O75896 110 aa10.56□□□□□ -0.72
SLIRP-210ENST00000557431 SCAF4O95104 1147 aaKnown RBP10.56□□□□□ -0.72
SLIRP-210ENST00000557431 CALRP27797 417 aaKnown RBP10.56□□□□□ -0.72
SLIRP-210ENST00000557431 KIR2DS2P43631 304 aa10.56□□□□□ -0.72
SLIRP-210ENST00000557431 SERPINB10P48595 397 aa10.56□□□□□ -0.72
SLIRP-210ENST00000557431 OR10A3P58181 314 aa10.56□□□□□ -0.72
SLIRP-210ENST00000557431 RPL30P62888 115 aaKnown RBP10.56□□□□□ -0.72
SLIRP-210ENST00000557431 MRPS15P82914 257 aaKnown RBP10.56□□□□□ -0.72
SLIRP-210ENST00000557431 C15orf32Q32M92 178 aa10.56□□□□□ -0.72
SLIRP-210ENST00000557431 CLEC19AQ6UXS0 136 aa10.56□□□□□ -0.72
SLIRP-210ENST00000557431 FAM223AQ8IWN6 122 aa10.56□□□□□ -0.72
SLIRP-210ENST00000557431 TMEM61Q8N0U2 210 aa10.56□□□□□ -0.72
SLIRP-210ENST00000557431 RAB3CQ96E17 227 aa10.56□□□□□ -0.72
SLIRP-210ENST00000557431 OVOL2Q9BRP0 275 aa10.56□□□□□ -0.72
SLIRP-210ENST00000557431 DCUN1D5Q9BTE7 237 aa10.56□□□□□ -0.72
SLIRP-210ENST00000557431 MLXQ9UH92 298 aa10.56□□□□□ -0.72
SLIRP-210ENST00000557431 A0A1B0GW64 132 aa10.55□□□□□ -0.72
SLIRP-210ENST00000557431 MFNGO00587 321 aa10.55□□□□□ -0.72
SLIRP-210ENST00000557431 AIREO43918 545 aa10.55□□□□□ -0.72
SLIRP-210ENST00000557431 FCGR3BO75015 233 aa10.55□□□□□ -0.72
SLIRP-210ENST00000557431 ARL6IP5O75915 188 aa10.55□□□□□ -0.72
SLIRP-210ENST00000557431 NDUFB8O95169 186 aa10.55□□□□□ -0.72
SLIRP-210ENST00000557431 FABP5Q01469 135 aa10.55□□□□□ -0.72
SLIRP-210ENST00000557431 CDK10Q15131 360 aa10.55□□□□□ -0.72
SLIRP-210ENST00000557431 SSX1Q16384 188 aa10.55□□□□□ -0.72
SLIRP-210ENST00000557431 LAX1Q8IWV1 398 aa10.55□□□□□ -0.72
SLIRP-210ENST00000557431 H1FOOQ8IZA3 346 aaPredicted RBP10.55□□□□□ -0.72
SLIRP-210ENST00000557431 CCDC140Q96MF4 163 aa10.55□□□□□ -0.72
SLIRP-210ENST00000557431 FYTTD1Q96QD9 318 aaKnown RBP10.55□□□□□ -0.72
SLIRP-210ENST00000557431 GPHA2Q96T91 129 aa10.55□□□□□ -0.72
SLIRP-210ENST00000557431 TMEM213A2RRL7 107 aa10.54□□□□□ -0.72
SLIRP-210ENST00000557431 SMIM30A4D0T7 59 aa10.54□□□□□ -0.72
SLIRP-210ENST00000557431 TEX22C9J3V5 150 aa10.54□□□□□ -0.72
SLIRP-210ENST00000557431 RAB27BO00194 218 aa10.54□□□□□ -0.72
SLIRP-210ENST00000557431 REG1AP05451 166 aa10.54□□□□□ -0.72
SLIRP-210ENST00000557431 RRASP10301 218 aa10.54□□□□□ -0.72
SLIRP-210ENST00000557431 SPARTQ8N0X7 666 aa10.54□□□□□ -0.72
SLIRP-210ENST00000557431 TTC9CQ8N5M4 171 aa10.54□□□□□ -0.72
SLIRP-210ENST00000557431 OR10R2Q8NGX6 335 aa10.54□□□□□ -0.72
SLIRP-210ENST00000557431 KCTD12Q96CX2 325 aaKnown RBP10.54□□□□□ -0.72
SLIRP-210ENST00000557431 ST6GALNAC5Q9BVH7 336 aa10.54□□□□□ -0.72
SLIRP-210ENST00000557431 FBXL7Q9UJT9 491 aa10.54□□□□□ -0.72
SLIRP-210ENST00000557431 V9GY05 133 aa10.54□□□□□ -0.72
SLIRP-210ENST00000557431 IGHV3-35A0A0C4DH35 117 aa10.53□□□□□ -0.72
SLIRP-210ENST00000557431 A0A0J9YWU9 116 aa10.53□□□□□ -0.72
SLIRP-210ENST00000557431 ZNF320A2RRD8 509 aa10.53□□□□□ -0.72
SLIRP-210ENST00000557431 CXorf65A6NEN9 183 aa10.53□□□□□ -0.72
SLIRP-210ENST00000557431 GGCTO75223 188 aaKnown RBP10.53□□□□□ -0.72
SLIRP-210ENST00000557431 ACTL6BO94805 426 aa10.53□□□□□ -0.72
SLIRP-210ENST00000557431 IL6RP08887 468 aaPredicted RBP10.53□□□□□ -0.72
SLIRP-210ENST00000557431 AREGP15514 252 aa10.53□□□□□ -0.72
SLIRP-210ENST00000557431 HIST1H1DP16402 221 aaKnown RBP10.53□□□□□ -0.72
SLIRP-210ENST00000557431 CBLN1P23435 193 aa10.53□□□□□ -0.72
SLIRP-210ENST00000557431 NFYAP23511 347 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms