RNA–Protein interactions for RNA: ENST00000557418.1

FOXA1-205, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 392 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-205ENST00000557418 ADARB2-AS1A8MUL3 147 aa16.69■□□□□ 0.26
FOXA1-205ENST00000557418 RLN1P04808 185 aa16.69■□□□□ 0.26
FOXA1-205ENST00000557418 PIGPP57054 158 aa16.69■□□□□ 0.26
FOXA1-205ENST00000557418 KCTD9Q7L273 389 aa16.69■□□□□ 0.26
FOXA1-205ENST00000557418 ADAD2Q8NCV1 583 aaKnown RBP16.69■□□□□ 0.26
FOXA1-205ENST00000557418 TMEM230Q96A57 120 aa16.69■□□□□ 0.26
FOXA1-205ENST00000557418 FLVCR2Q9UPI3 526 aa16.69■□□□□ 0.26
FOXA1-205ENST00000557418 C14orf166Q9Y224 244 aaKnown RBP16.69■□□□□ 0.26
FOXA1-205ENST00000557418 NOTCH3Q9UM47 2321 aa16.68■□□□□ 0.26
FOXA1-205ENST00000557418 A0A1W2PRX2 142 aa16.68■□□□□ 0.26
FOXA1-205ENST00000557418 MPPED1O15442 326 aa16.68■□□□□ 0.26
FOXA1-205ENST00000557418 TCRBP04435 133 aa16.68■□□□□ 0.26
FOXA1-205ENST00000557418 MC5RP33032 325 aa16.68■□□□□ 0.26
FOXA1-205ENST00000557418 NRARPQ7Z6K4 114 aa16.68■□□□□ 0.26
FOXA1-205ENST00000557418 TBC1D26Q86UD7 250 aa16.68■□□□□ 0.26
FOXA1-205ENST00000557418 Q8N6K4 173 aa16.68■□□□□ 0.26
FOXA1-205ENST00000557418 TCTEX1D2Q8WW35 142 aa16.68■□□□□ 0.26
FOXA1-205ENST00000557418 FAM240BA0A1B0GVZ2 78 aa16.67■□□□□ 0.26
FOXA1-205ENST00000557418 G3V4G9 280 aa16.67■□□□□ 0.26
FOXA1-205ENST00000557418 FGF16O43320 207 aa16.67■□□□□ 0.26
FOXA1-205ENST00000557418 F2RP25116 425 aa16.67■□□□□ 0.26
FOXA1-205ENST00000557418 TAGLNQ01995 201 aaKnown RBP16.67■□□□□ 0.26
FOXA1-205ENST00000557418 C5orf56Q8N8D9 126 aa16.67■□□□□ 0.26
FOXA1-205ENST00000557418 DUSP18Q8NEJ0 188 aa16.67■□□□□ 0.26
FOXA1-205ENST00000557418 OR4X2Q8NGF9 303 aa16.67■□□□□ 0.26
FOXA1-205ENST00000557418 OR2T10Q8NGZ9 312 aa16.67■□□□□ 0.26
FOXA1-205ENST00000557418 OR51H1Q8NH63 302 aa16.67■□□□□ 0.26
FOXA1-205ENST00000557418 EAF1Q96JC9 268 aaPredicted RBP16.67■□□□□ 0.26
FOXA1-205ENST00000557418 SLC35D1Q9NTN3 355 aa16.67■□□□□ 0.26
FOXA1-205ENST00000557418 WASHC3Q9Y3C0 194 aa16.67■□□□□ 0.26
FOXA1-205ENST00000557418 TSSC4Q9Y5U2 329 aaPredicted RBP16.67■□□□□ 0.26
FOXA1-205ENST00000557418 APOA2P02652 100 aa16.66■□□□□ 0.26
FOXA1-205ENST00000557418 IGKV1-16P04430 117 aa16.66■□□□□ 0.26
FOXA1-205ENST00000557418 CATR1Q13166 79 aa16.66■□□□□ 0.26
FOXA1-205ENST00000557418 TCTEX1D4Q5JR98 221 aa16.66■□□□□ 0.26
FOXA1-205ENST00000557418 PDPNQ86YL7 162 aa16.66■□□□□ 0.26
FOXA1-205ENST00000557418 CCDC71LQ8N9Z2 235 aa16.66■□□□□ 0.26
FOXA1-205ENST00000557418 RITA1Q96K30 269 aa16.66■□□□□ 0.26
FOXA1-205ENST00000557418 COPZ2Q9P299 210 aa16.66■□□□□ 0.26
FOXA1-205ENST00000557418 PRELID3BQ9Y3B1 194 aa16.66■□□□□ 0.26
FOXA1-205ENST00000557418 PSMB11A5LHX3 300 aa16.65■□□□□ 0.26
FOXA1-205ENST00000557418 CRYM-AS1A6NIL9 109 aa16.65■□□□□ 0.26
FOXA1-205ENST00000557418 NCBP2LA6PVI3 153 aaKnown RBP16.65■□□□□ 0.26
FOXA1-205ENST00000557418 ARPC1BO15143 372 aaKnown RBP16.65■□□□□ 0.26
FOXA1-205ENST00000557418 FCGR3BO75015 233 aa16.65■□□□□ 0.26
FOXA1-205ENST00000557418 S100GP29377 79 aa16.65■□□□□ 0.26
FOXA1-205ENST00000557418 DHODHQ02127 395 aa16.65■□□□□ 0.26
FOXA1-205ENST00000557418 OR2B11Q5JQS5 317 aa16.65■□□□□ 0.26
FOXA1-205ENST00000557418 TMED4Q7Z7H5 227 aa16.65■□□□□ 0.26
FOXA1-205ENST00000557418 SLC25A42Q86VD7 318 aa16.65■□□□□ 0.26
FOXA1-205ENST00000557418 ENKURQ8TC29 256 aa16.65■□□□□ 0.26
FOXA1-205ENST00000557418 C20orf85Q9H1P6 137 aa16.65■□□□□ 0.26
FOXA1-205ENST00000557418 H7C2Y5 167 aa16.64■□□□□ 0.25
FOXA1-205ENST00000557418 RBFOX2O43251 390 aaKnown RBP eCLIP16.64■□□□□ 0.25
FOXA1-205ENST00000557418 RAMP3O60896 148 aa16.64■□□□□ 0.25
FOXA1-205ENST00000557418 MOSP00540 346 aa16.64■□□□□ 0.25
FOXA1-205ENST00000557418 RRASP10301 218 aa16.64■□□□□ 0.25
FOXA1-205ENST00000557418 PF4V1P10720 104 aa16.64■□□□□ 0.25
FOXA1-205ENST00000557418 SPNP16150 400 aa16.64■□□□□ 0.25
FOXA1-205ENST00000557418 KIR2DS2P43631 304 aa16.64■□□□□ 0.25
FOXA1-205ENST00000557418 SUPT4H1P63272 117 aaKnown RBP16.64■□□□□ 0.25
FOXA1-205ENST00000557418 ZNF585BQ52M93 769 aa16.64■□□□□ 0.25
FOXA1-205ENST00000557418 TMEM177Q53S58 311 aa16.64■□□□□ 0.25
FOXA1-205ENST00000557418 SAMD5Q5TGI4 173 aa16.64■□□□□ 0.25
FOXA1-205ENST00000557418 C10orf99Q6UWK7 81 aa16.64■□□□□ 0.25
FOXA1-205ENST00000557418 SPAG16Q8N0X2 631 aa16.64■□□□□ 0.25
FOXA1-205ENST00000557418 CENPSQ8N2Z9 138 aa16.64■□□□□ 0.25
FOXA1-205ENST00000557418 TP53RKQ96S44 253 aa16.64■□□□□ 0.25
FOXA1-205ENST00000557418 NAA60Q9H7X0 242 aa16.64■□□□□ 0.25
FOXA1-205ENST00000557418 LIN7CQ9NUP9 197 aaKnown RBP16.64■□□□□ 0.25
FOXA1-205ENST00000557418 NUBP2Q9Y5Y2 271 aa16.64■□□□□ 0.25
FOXA1-205ENST00000557418 C3orf85A0A1B0GTC6 90 aa16.63■□□□□ 0.25
FOXA1-205ENST00000557418 RTL8BQ17RB0 113 aa16.63■□□□□ 0.25
FOXA1-205ENST00000557418 BEAN1Q3B7T3 259 aa16.63■□□□□ 0.25
FOXA1-205ENST00000557418 KHDC1LQ5JSQ8 128 aa16.63■□□□□ 0.25
FOXA1-205ENST00000557418 TCTEX1D1Q8N7M0 179 aa16.63■□□□□ 0.25
FOXA1-205ENST00000557418 CHPT1Q8WUD6 406 aa16.63■□□□□ 0.25
FOXA1-205ENST00000557418 PLSCR3Q9NRY6 295 aa16.63■□□□□ 0.25
FOXA1-205ENST00000557418 FAM212BQ9NTI7 297 aaPredicted RBP16.63■□□□□ 0.25
FOXA1-205ENST00000557418 NUDT15Q9NV35 164 aa16.63■□□□□ 0.25
FOXA1-205ENST00000557418 H0Y980 276 aa16.62■□□□□ 0.25
FOXA1-205ENST00000557418 CRYZL1O95825 349 aa16.62■□□□□ 0.25
FOXA1-205ENST00000557418 PTTG1O95997 202 aa16.62■□□□□ 0.25
FOXA1-205ENST00000557418 AKR1C4P17516 323 aa16.62■□□□□ 0.25
FOXA1-205ENST00000557418 ANXA7P20073 488 aaKnown RBP16.62■□□□□ 0.25
FOXA1-205ENST00000557418 MECP2P51608 486 aaKnown RBP16.62■□□□□ 0.25
FOXA1-205ENST00000557418 TMEM128Q5BJH2 165 aa16.62■□□□□ 0.25
FOXA1-205ENST00000557418 OXLD1Q5BKU9 147 aa16.62■□□□□ 0.25
FOXA1-205ENST00000557418 SLC35E3Q7Z769 313 aa16.62■□□□□ 0.25
FOXA1-205ENST00000557418 ZNF329Q86UD4 541 aa16.62■□□□□ 0.25
FOXA1-205ENST00000557418 OR4S2Q8NH73 311 aa16.62■□□□□ 0.25
FOXA1-205ENST00000557418 CD300LFQ8TDQ1 290 aa16.62■□□□□ 0.25
FOXA1-205ENST00000557418 FLYWCH2Q96CP2 140 aaKnown RBP16.62■□□□□ 0.25
FOXA1-205ENST00000557418 GALNT14Q96FL9 552 aa16.62■□□□□ 0.25
FOXA1-205ENST00000557418 NOL4LQ96MY1 436 aaPredicted RBP16.62■□□□□ 0.25
FOXA1-205ENST00000557418 RNF5Q99942 180 aa16.62■□□□□ 0.25
FOXA1-205ENST00000557418 TRAV6A0A075B6T7 132 aa16.61■□□□□ 0.25
FOXA1-205ENST00000557418 TEX13DA0A0J9YY54 714 aaPredicted RBP16.61■□□□□ 0.25
FOXA1-205ENST00000557418 SRRM4A7MD48 611 aaKnown RBP16.61■□□□□ 0.25
FOXA1-205ENST00000557418 IGLV2-23P01705 113 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms