RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 LINC00205P59089 165 aa10.82□□□□□ -0.68
VPS33B-206ENST00000557358 DGCR2P98153 550 aa10.82□□□□□ -0.68
VPS33B-206ENST00000557358 CFHR3Q02985 330 aa10.82□□□□□ -0.68
VPS33B-206ENST00000557358 MSMO1Q15800 293 aa10.82□□□□□ -0.68
VPS33B-206ENST00000557358 AKIRIN2Q53H80 203 aa10.82□□□□□ -0.68
VPS33B-206ENST00000557358 SAMD5Q5TGI4 173 aa10.82□□□□□ -0.68
VPS33B-206ENST00000557358 LCNL1Q6ZST4 164 aa10.82□□□□□ -0.68
VPS33B-206ENST00000557358 Q8N402 240 aa10.82□□□□□ -0.68
VPS33B-206ENST00000557358 TEX45Q8NA69 505 aa10.82□□□□□ -0.68
VPS33B-206ENST00000557358 POC5Q8NA72 575 aa10.82□□□□□ -0.68
VPS33B-206ENST00000557358 OR52I2Q8NH67 350 aa10.82□□□□□ -0.68
VPS33B-206ENST00000557358 GRPEL2Q8TAA5 225 aa10.82□□□□□ -0.68
VPS33B-206ENST00000557358 VSTM2AQ8TAG5 236 aa10.82□□□□□ -0.68
VPS33B-206ENST00000557358 GPX8Q8TED1 209 aa10.82□□□□□ -0.68
VPS33B-206ENST00000557358 C4orf3Q8WVX3 66 aa10.82□□□□□ -0.68
VPS33B-206ENST00000557358 FCAMRQ8WWV6 532 aa10.82□□□□□ -0.68
VPS33B-206ENST00000557358 RBMXL1Q96E39 390 aaKnown RBP10.82□□□□□ -0.68
VPS33B-206ENST00000557358 UBE2E2Q96LR5 201 aa10.82□□□□□ -0.68
VPS33B-206ENST00000557358 PHB2Q99623 299 aa10.82□□□□□ -0.68
VPS33B-206ENST00000557358 CCDC32Q9BV29 185 aa10.82□□□□□ -0.68
VPS33B-206ENST00000557358 SLC5A7Q9GZV3 580 aa10.82□□□□□ -0.68
VPS33B-206ENST00000557358 ZNF355PQ9NSJ1 428 aa10.82□□□□□ -0.68
VPS33B-206ENST00000557358 EHFQ9NZC4 300 aa10.82□□□□□ -0.68
VPS33B-206ENST00000557358 NOTCH1P46531 2555 aa10.82□□□□□ -0.68
VPS33B-206ENST00000557358 MEIS3P1A6NDR6 274 aa10.81□□□□□ -0.68
VPS33B-206ENST00000557358 HRASP01112 189 aa10.81□□□□□ -0.68
VPS33B-206ENST00000557358 FCER2P06734 321 aa10.81□□□□□ -0.68
VPS33B-206ENST00000557358 AADACP22760 399 aa10.81□□□□□ -0.68
VPS33B-206ENST00000557358 PPIFP30405 207 aaKnown RBP10.81□□□□□ -0.68
VPS33B-206ENST00000557358 RAB9AP51151 201 aa10.81□□□□□ -0.68
VPS33B-206ENST00000557358 CRIP2P52943 208 aaPredicted RBP10.81□□□□□ -0.68
VPS33B-206ENST00000557358 FXYD4P59646 89 aa10.81□□□□□ -0.68
VPS33B-206ENST00000557358 UBE2KP61086 200 aa10.81□□□□□ -0.68
VPS33B-206ENST00000557358 PDLIM3Q53GG5 364 aaPredicted RBP10.81□□□□□ -0.68
VPS33B-206ENST00000557358 OXLD1Q5BKU9 147 aa10.81□□□□□ -0.68
VPS33B-206ENST00000557358 MINDY2Q8NBR6 621 aa10.81□□□□□ -0.68
VPS33B-206ENST00000557358 GIMAP1Q8WWP7 306 aa10.81□□□□□ -0.68
VPS33B-206ENST00000557358 SDHCQ99643 169 aaPredicted RBP10.81□□□□□ -0.68
VPS33B-206ENST00000557358 SLA2Q9H6Q3 261 aa10.81□□□□□ -0.68
VPS33B-206ENST00000557358 NUBP2Q9Y5Y2 271 aa10.81□□□□□ -0.68
VPS33B-206ENST00000557358 IGKV1D-13A0A0B4J2D9 117 aa10.8□□□□□ -0.68
VPS33B-206ENST00000557358 LINC00473A8K010 186 aa10.8□□□□□ -0.68
VPS33B-206ENST00000557358 FCN1O00602 326 aa10.8□□□□□ -0.68
VPS33B-206ENST00000557358 MPPED1O15442 326 aa10.8□□□□□ -0.68
VPS33B-206ENST00000557358 IGLV1-40P01703 118 aa10.8□□□□□ -0.68
VPS33B-206ENST00000557358 OR8U8P0C7N1 319 aa10.8□□□□□ -0.68
VPS33B-206ENST00000557358 IGKV1-13P0DP09 117 aa10.8□□□□□ -0.68
VPS33B-206ENST00000557358 IGLL1P15814 213 aa10.8□□□□□ -0.68
VPS33B-206ENST00000557358 RCVRNP35243 200 aa10.8□□□□□ -0.68
VPS33B-206ENST00000557358 TSPAN5P62079 268 aa10.8□□□□□ -0.68
VPS33B-206ENST00000557358 SSBP1Q04837 148 aaKnown RBP10.8□□□□□ -0.68
VPS33B-206ENST00000557358 TRIQKQ629K1 86 aa10.8□□□□□ -0.68
VPS33B-206ENST00000557358 MRPL41Q8IXM3 137 aaKnown RBP10.8□□□□□ -0.68
VPS33B-206ENST00000557358 CMTM1Q8IZ96 169 aa10.8□□□□□ -0.68
VPS33B-206ENST00000557358 LINC00482Q8N8I6 264 aa10.8□□□□□ -0.68
VPS33B-206ENST00000557358 LFNGQ8NES3 379 aa10.8□□□□□ -0.68
VPS33B-206ENST00000557358 CD300LFQ8TDQ1 290 aa10.8□□□□□ -0.68
VPS33B-206ENST00000557358 DDB2Q92466 427 aa10.8□□□□□ -0.68
VPS33B-206ENST00000557358 TRIM63Q969Q1 353 aa10.8□□□□□ -0.68
VPS33B-206ENST00000557358 THAP7Q9BT49 309 aaPredicted RBP10.8□□□□□ -0.68
VPS33B-206ENST00000557358 TAS2R8Q9NYW2 309 aa10.8□□□□□ -0.68
VPS33B-206ENST00000557358 MTFP1Q9UDX5 166 aa10.8□□□□□ -0.68
VPS33B-206ENST00000557358 A0A0G2JLM5 398 aa10.79□□□□□ -0.68
VPS33B-206ENST00000557358 H3BUA1 57 aa10.79□□□□□ -0.68
VPS33B-206ENST00000557358 IGLV2-23P01705 113 aa10.79□□□□□ -0.68
VPS33B-206ENST00000557358 IL7P13232 177 aa10.79□□□□□ -0.68
VPS33B-206ENST00000557358 NDPQ00604 133 aa10.79□□□□□ -0.68
VPS33B-206ENST00000557358 TNXAQ16473 311 aa10.79□□□□□ -0.68
VPS33B-206ENST00000557358 BAK1Q16611 211 aa10.79□□□□□ -0.68
VPS33B-206ENST00000557358 BEAN1Q3B7T3 259 aa10.79□□□□□ -0.68
VPS33B-206ENST00000557358 OR2B11Q5JQS5 317 aa10.79□□□□□ -0.68
VPS33B-206ENST00000557358 LPCAT3Q6P1A2 487 aa10.79□□□□□ -0.68
VPS33B-206ENST00000557358 OVCH2Q7RTZ1 564 aa10.79□□□□□ -0.68
VPS33B-206ENST00000557358 TMEM17Q86X19 198 aa10.79□□□□□ -0.68
VPS33B-206ENST00000557358 MMD2Q8IY49 270 aa10.79□□□□□ -0.68
VPS33B-206ENST00000557358 ZNF491Q8N8L2 437 aa10.79□□□□□ -0.68
VPS33B-206ENST00000557358 OR6F1Q8NGZ6 308 aa10.79□□□□□ -0.68
VPS33B-206ENST00000557358 SNAPC3Q92966 411 aa10.79□□□□□ -0.68
VPS33B-206ENST00000557358 C5orf30Q96GV9 206 aa10.79□□□□□ -0.68
VPS33B-206ENST00000557358 FAM103A1Q9BTL3 118 aaKnown RBP10.79□□□□□ -0.68
VPS33B-206ENST00000557358 ANAPC10Q9UM13 185 aa10.79□□□□□ -0.68
VPS33B-206ENST00000557358 C13orf42A0A1B0GVH6 325 aa10.78□□□□□ -0.68
VPS33B-206ENST00000557358 UPK1BO75841 260 aa10.78□□□□□ -0.68
VPS33B-206ENST00000557358 PMP2P02689 132 aa10.78□□□□□ -0.68
VPS33B-206ENST00000557358 TRGV3P03979 118 aa10.78□□□□□ -0.68
VPS33B-206ENST00000557358 IFNA6P05013 189 aa10.78□□□□□ -0.68
VPS33B-206ENST00000557358 INPP1P49441 399 aa10.78□□□□□ -0.68
VPS33B-206ENST00000557358 TPPP2P59282 170 aa10.78□□□□□ -0.68
VPS33B-206ENST00000557358 DYRK1AQ13627 763 aa10.78□□□□□ -0.68
VPS33B-206ENST00000557358 PRSS8Q16651 343 aa10.78□□□□□ -0.68
VPS33B-206ENST00000557358 KPRPQ5T749 579 aaPredicted RBP10.78□□□□□ -0.68
VPS33B-206ENST00000557358 C18orf65Q6ZTR6 163 aa10.78□□□□□ -0.68
VPS33B-206ENST00000557358 OR11H1Q8NG94 326 aa10.78□□□□□ -0.68
VPS33B-206ENST00000557358 OR1N2Q8NGR9 330 aa10.78□□□□□ -0.68
VPS33B-206ENST00000557358 RAX2Q96IS3 184 aa10.78□□□□□ -0.68
VPS33B-206ENST00000557358 P2RX4Q99571 388 aa10.78□□□□□ -0.68
VPS33B-206ENST00000557358 SPIN2AQ99865 258 aa10.78□□□□□ -0.68
VPS33B-206ENST00000557358 SPIN2BQ9BPZ2 258 aa10.78□□□□□ -0.68
VPS33B-206ENST00000557358 ZNF2Q9BSG1 426 aaPredicted RBP10.78□□□□□ -0.68
VPS33B-206ENST00000557358 CCL28Q9NRJ3 127 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms