RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 OR2B11Q5JQS5 317 aa9.77□□□□□ -0.85
SLIRP-209ENST00000557342 VAX1Q5SQQ9 334 aa9.77□□□□□ -0.85
SLIRP-209ENST00000557342 LPCAT3Q6P1A2 487 aa9.77□□□□□ -0.85
SLIRP-209ENST00000557342 UNQ5815/PRO19632Q6UWF5 114 aa9.77□□□□□ -0.85
SLIRP-209ENST00000557342 ZNF818PQ6ZRF7 136 aa9.77□□□□□ -0.85
SLIRP-209ENST00000557342 OR5M8Q8NGP6 311 aa9.77□□□□□ -0.85
SLIRP-209ENST00000557342 OR52I2Q8NH67 350 aa9.77□□□□□ -0.85
SLIRP-209ENST00000557342 VSTM2AQ8TAG5 236 aa9.77□□□□□ -0.85
SLIRP-209ENST00000557342 CD300LFQ8TDQ1 290 aa9.77□□□□□ -0.85
SLIRP-209ENST00000557342 DIRAS2Q96HU8 199 aa9.77□□□□□ -0.85
SLIRP-209ENST00000557342 TMEM68Q96MH6 324 aa9.77□□□□□ -0.85
SLIRP-209ENST00000557342 ABHD1Q96SE0 405 aa9.77□□□□□ -0.85
SLIRP-209ENST00000557342 C6orf62Q9GZU0 229 aaPredicted RBP9.77□□□□□ -0.85
SLIRP-209ENST00000557342 MTFP1Q9UDX5 166 aa9.77□□□□□ -0.85
SLIRP-209ENST00000557342 FBXO7Q9Y3I1 522 aa9.77□□□□□ -0.85
SLIRP-209ENST00000557342 GABARAPH6UMI1 98 aa9.76□□□□□ -0.85
SLIRP-209ENST00000557342 ARPC1BO15143 372 aaKnown RBP9.76□□□□□ -0.85
SLIRP-209ENST00000557342 RBFOX2O43251 390 aaKnown RBP eCLIP9.76□□□□□ -0.85
SLIRP-209ENST00000557342 ACTL6BO94805 426 aa9.76□□□□□ -0.85
SLIRP-209ENST00000557342 HRASP01112 189 aa9.76□□□□□ -0.85
SLIRP-209ENST00000557342 IFNA6P05013 189 aa9.76□□□□□ -0.85
SLIRP-209ENST00000557342 S100GP29377 79 aa9.76□□□□□ -0.85
SLIRP-209ENST00000557342 GNRHRP30968 328 aa9.76□□□□□ -0.85
SLIRP-209ENST00000557342 MYCNOSP40205 109 aa9.76□□□□□ -0.85
SLIRP-209ENST00000557342 GNB1P62873 340 aa9.76□□□□□ -0.85
SLIRP-209ENST00000557342 SSBP1Q04837 148 aaKnown RBP9.76□□□□□ -0.85
SLIRP-209ENST00000557342 IL18Q14116 193 aa9.76□□□□□ -0.85
SLIRP-209ENST00000557342 PRSS8Q16651 343 aa9.76□□□□□ -0.85
SLIRP-209ENST00000557342 RNASE12Q5GAN4 147 aaKnown RBP9.76□□□□□ -0.85
SLIRP-209ENST00000557342 AADACL3Q5VUY0 350 aa9.76□□□□□ -0.85
SLIRP-209ENST00000557342 C8orf86Q6ZUL3 223 aa9.76□□□□□ -0.85
SLIRP-209ENST00000557342 CMTM1Q8IZ96 169 aa9.76□□□□□ -0.85
SLIRP-209ENST00000557342 POC5Q8NA72 575 aa9.76□□□□□ -0.85
SLIRP-209ENST00000557342 LFNGQ8NES3 379 aa9.76□□□□□ -0.85
SLIRP-209ENST00000557342 GRPEL2Q8TAA5 225 aa9.76□□□□□ -0.85
SLIRP-209ENST00000557342 FAM103A1Q9BTL3 118 aaKnown RBP9.76□□□□□ -0.85
SLIRP-209ENST00000557342 KLK11Q9UBX7 282 aa9.76□□□□□ -0.85
SLIRP-209ENST00000557342 GPR31O00270 319 aa9.75□□□□□ -0.85
SLIRP-209ENST00000557342 CTDSPLO15194 276 aa9.75□□□□□ -0.85
SLIRP-209ENST00000557342 HPRT1P00492 218 aa9.75□□□□□ -0.85
SLIRP-209ENST00000557342 SAA1P0DJI8 122 aaPredicted RBP9.75□□□□□ -0.85
SLIRP-209ENST00000557342 RAB9AP51151 201 aa9.75□□□□□ -0.85
SLIRP-209ENST00000557342 TAS2R19P59542 299 aa9.75□□□□□ -0.85
SLIRP-209ENST00000557342 TNXAQ16473 311 aa9.75□□□□□ -0.85
SLIRP-209ENST00000557342 RNASE10Q5GAN6 216 aaKnown RBP9.75□□□□□ -0.85
SLIRP-209ENST00000557342 LCNL1Q6ZST4 164 aa9.75□□□□□ -0.85
SLIRP-209ENST00000557342 C18orf65Q6ZTR6 163 aa9.75□□□□□ -0.85
SLIRP-209ENST00000557342 MMD2Q8IY49 270 aa9.75□□□□□ -0.85
SLIRP-209ENST00000557342 SPAG16Q8N0X2 631 aa9.75□□□□□ -0.85
SLIRP-209ENST00000557342 ZNF491Q8N8L2 437 aa9.75□□□□□ -0.85
SLIRP-209ENST00000557342 TMEM229BQ8NBD8 167 aa9.75□□□□□ -0.85
SLIRP-209ENST00000557342 WFDC9Q8NEX5 89 aa9.75□□□□□ -0.85
SLIRP-209ENST00000557342 OR6Q1Q8NGQ2 317 aa9.75□□□□□ -0.85
SLIRP-209ENST00000557342 MYOZ3Q8TDC0 251 aa9.75□□□□□ -0.85
SLIRP-209ENST00000557342 C4orf3Q8WVX3 66 aa9.75□□□□□ -0.85
SLIRP-209ENST00000557342 UBE2E2Q96LR5 201 aa9.75□□□□□ -0.85
SLIRP-209ENST00000557342 GPHA2Q96T91 129 aa9.75□□□□□ -0.85
SLIRP-209ENST00000557342 PHB2Q99623 299 aa9.75□□□□□ -0.85
SLIRP-209ENST00000557342 FXYD6Q9H0Q3 95 aa9.75□□□□□ -0.85
SLIRP-209ENST00000557342 H3BUA1 57 aa9.74□□□□□ -0.85
SLIRP-209ENST00000557342 PGLYRP1O75594 196 aaPredicted RBP9.74□□□□□ -0.85
SLIRP-209ENST00000557342 OR2A4O95047 310 aa9.74□□□□□ -0.85
SLIRP-209ENST00000557342 DUS4LO95620 317 aaKnown RBP9.74□□□□□ -0.85
SLIRP-209ENST00000557342 UCP3P55916 312 aa9.74□□□□□ -0.85
SLIRP-209ENST00000557342 BRWD1-AS2P59051 145 aa9.74□□□□□ -0.85
SLIRP-209ENST00000557342 TAS2R31P59538 309 aa9.74□□□□□ -0.85
SLIRP-209ENST00000557342 SSBP2P81877 361 aaPredicted RBP9.74□□□□□ -0.85
SLIRP-209ENST00000557342 PJVKQ0ZLH3 352 aa9.74□□□□□ -0.85
SLIRP-209ENST00000557342 IDO2Q6ZQW0 420 aa9.74□□□□□ -0.85
SLIRP-209ENST00000557342 SLC38A6Q8IZM9 456 aa9.74□□□□□ -0.85
SLIRP-209ENST00000557342 ARRDC1Q8N5I2 433 aa9.74□□□□□ -0.85
SLIRP-209ENST00000557342 OR51H1Q8NH63 302 aa9.74□□□□□ -0.85
SLIRP-209ENST00000557342 RHOVQ96L33 236 aa9.74□□□□□ -0.85
SLIRP-209ENST00000557342 OR2A7Q96R45 310 aa9.74□□□□□ -0.85
SLIRP-209ENST00000557342 TSC22D3Q99576 134 aa9.74□□□□□ -0.85
SLIRP-209ENST00000557342 KLK15Q9H2R5 256 aa9.74□□□□□ -0.85
SLIRP-209ENST00000557342 SLA2Q9H6Q3 261 aa9.74□□□□□ -0.85
SLIRP-209ENST00000557342 ZNF430Q9H8G1 570 aaPredicted RBP9.74□□□□□ -0.85
SLIRP-209ENST00000557342 VSIG4Q9Y279 399 aa9.74□□□□□ -0.85
SLIRP-209ENST00000557342 M0QYG6 137 aa9.73□□□□□ -0.85
SLIRP-209ENST00000557342 CCL24O00175 119 aa9.73□□□□□ -0.85
SLIRP-209ENST00000557342 SOX15O60248 233 aa9.73□□□□□ -0.85
SLIRP-209ENST00000557342 RAMP3O60896 148 aa9.73□□□□□ -0.85
SLIRP-209ENST00000557342 KBTBD11O94819 623 aa9.73□□□□□ -0.85
SLIRP-209ENST00000557342 CD3DP04234 171 aa9.73□□□□□ -0.85
SLIRP-209ENST00000557342 RLN1P04808 185 aa9.73□□□□□ -0.85
SLIRP-209ENST00000557342 NQO2P16083 231 aa9.73□□□□□ -0.85
SLIRP-209ENST00000557342 S100A5P33763 92 aa9.73□□□□□ -0.85
SLIRP-209ENST00000557342 MAS1LP35410 378 aa9.73□□□□□ -0.85
SLIRP-209ENST00000557342 DGCR2P98153 550 aa9.73□□□□□ -0.85
SLIRP-209ENST00000557342 KIAA0141Q14154 515 aaPredicted RBP9.73□□□□□ -0.85
SLIRP-209ENST00000557342 MRGPRG-AS1Q2M3A8 158 aa9.73□□□□□ -0.85
SLIRP-209ENST00000557342 SAMD5Q5TGI4 173 aa9.73□□□□□ -0.85
SLIRP-209ENST00000557342 ETV3LQ6ZN32 361 aa9.73□□□□□ -0.85
SLIRP-209ENST00000557342 VKORC1L1Q8N0U8 176 aa9.73□□□□□ -0.85
SLIRP-209ENST00000557342 PUSL1Q8N0Z8 303 aaKnown RBP9.73□□□□□ -0.85
SLIRP-209ENST00000557342 LINC00482Q8N8I6 264 aa9.73□□□□□ -0.85
SLIRP-209ENST00000557342 OR4A5Q8NH83 315 aa9.73□□□□□ -0.85
SLIRP-209ENST00000557342 TMEM167AQ8TBQ9 72 aa9.73□□□□□ -0.85
SLIRP-209ENST00000557342 SMIM4Q8WVI0 70 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms