RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 SPIN2BQ9BPZ2 258 aa4.05□□□□□ -1.76
ATXN3-245ENST00000556958 TAF9BQ9HBM6 251 aa4.05□□□□□ -1.76
ATXN3-245ENST00000556958 SPACA1Q9HBV2 294 aa4.05□□□□□ -1.76
ATXN3-245ENST00000556958 DAZ1Q9NQZ3 744 aaKnown RBP4.05□□□□□ -1.76
ATXN3-245ENST00000556958 STEAP1Q9UHE8 339 aa4.05□□□□□ -1.76
ATXN3-245ENST00000556958 TRBV7-1A0A0A6YYK4 115 aa4.04□□□□□ -1.76
ATXN3-245ENST00000556958 LOC107986453A0A1B0GWG9 222 aa4.04□□□□□ -1.76
ATXN3-245ENST00000556958 A0A1W2PPQ1 181 aa4.04□□□□□ -1.76
ATXN3-245ENST00000556958 PRR32B1ATL7 298 aa4.04□□□□□ -1.76
ATXN3-245ENST00000556958 MCRIP1C9JLW8 97 aa4.04□□□□□ -1.76
ATXN3-245ENST00000556958 H3BN98 237 aa4.04□□□□□ -1.76
ATXN3-245ENST00000556958 CA11O75493 328 aa4.04□□□□□ -1.76
ATXN3-245ENST00000556958 CIB2O75838 187 aa4.04□□□□□ -1.76
ATXN3-245ENST00000556958 DFFBO76075 338 aa4.04□□□□□ -1.76
ATXN3-245ENST00000556958 ACTL6BO94805 426 aa4.04□□□□□ -1.76
ATXN3-245ENST00000556958 CCNB2O95067 398 aa4.04□□□□□ -1.76
ATXN3-245ENST00000556958 DHFRP00374 187 aa4.04□□□□□ -1.76
ATXN3-245ENST00000556958 CST1P01037 141 aa4.04□□□□□ -1.76
ATXN3-245ENST00000556958 APOA2P02652 100 aa4.04□□□□□ -1.76
ATXN3-245ENST00000556958 CLEC3BP05452 202 aa4.04□□□□□ -1.76
ATXN3-245ENST00000556958 CTSDP07339 412 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-245ENST00000556958 MRPL3P09001 348 aaKnown RBP4.04□□□□□ -1.76
ATXN3-245ENST00000556958 APELAP0DMC3 54 aa4.04□□□□□ -1.76
ATXN3-245ENST00000556958 HTN3P15516 51 aa4.04□□□□□ -1.76
ATXN3-245ENST00000556958 ERVFC1-1P60608 527 aa4.04□□□□□ -1.76
ATXN3-245ENST00000556958 SSBP2P81877 361 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-245ENST00000556958 FLOT2Q14254 428 aa4.04□□□□□ -1.76
ATXN3-245ENST00000556958 PIGYQ3MUY2 71 aa4.04□□□□□ -1.76
ATXN3-245ENST00000556958 UNQ9165/PRO28630Q6UXU0 137 aa4.04□□□□□ -1.76
ATXN3-245ENST00000556958 PDPNQ86YL7 162 aa4.04□□□□□ -1.76
ATXN3-245ENST00000556958 ARHGAP24Q8N264 748 aa4.04□□□□□ -1.76
ATXN3-245ENST00000556958 AQP11Q8NBQ7 271 aa4.04□□□□□ -1.76
ATXN3-245ENST00000556958 OR9Q2Q8NGE9 314 aa4.04□□□□□ -1.76
ATXN3-245ENST00000556958 OR5D14Q8NGL3 314 aa4.04□□□□□ -1.76
ATXN3-245ENST00000556958 OR4K15Q8NH41 348 aa4.04□□□□□ -1.76
ATXN3-245ENST00000556958 OR52N1Q8NH53 320 aa4.04□□□□□ -1.76
ATXN3-245ENST00000556958 GALMQ96C23 342 aa4.04□□□□□ -1.76
ATXN3-245ENST00000556958 CMTM3Q96MX0 182 aa4.04□□□□□ -1.76
ATXN3-245ENST00000556958 TTTY10Q9BZA0 68 aa4.04□□□□□ -1.76
ATXN3-245ENST00000556958 Q9H8V8 135 aa4.04□□□□□ -1.76
ATXN3-245ENST00000556958 REEP1Q9H902 201 aa4.04□□□□□ -1.76
ATXN3-245ENST00000556958 SLC2A9Q9NRM0 540 aa4.04□□□□□ -1.76
ATXN3-245ENST00000556958 SAMHD1Q9Y3Z3 626 aaKnown RBP4.04□□□□□ -1.76
ATXN3-245ENST00000556958 LRP2P98164 4655 aa4.04□□□□□ -1.76
ATXN3-245ENST00000556958 DSCAML1Q8TD84 2053 aa4.03□□□□□ -1.76
ATXN3-245ENST00000556958 MAGEB4O15481 346 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-245ENST00000556958 GPX5O75715 221 aa4.03□□□□□ -1.76
ATXN3-245ENST00000556958 MAS1P04201 325 aa4.03□□□□□ -1.76
ATXN3-245ENST00000556958 IGKV1-16P04430 117 aa4.03□□□□□ -1.76
ATXN3-245ENST00000556958 CD5P06127 495 aa4.03□□□□□ -1.76
ATXN3-245ENST00000556958 GNB3P16520 340 aa4.03□□□□□ -1.76
ATXN3-245ENST00000556958 PRKACGP22612 351 aa4.03□□□□□ -1.76
ATXN3-245ENST00000556958 TFPI2P48307 235 aa4.03□□□□□ -1.76
ATXN3-245ENST00000556958 RPS27AP62979 156 aaKnown RBP4.03□□□□□ -1.76
ATXN3-245ENST00000556958 CBX3Q13185 183 aa4.03□□□□□ -1.76
ATXN3-245ENST00000556958 GNMTQ14749 295 aa4.03□□□□□ -1.76
ATXN3-245ENST00000556958 USF2Q15853 346 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-245ENST00000556958 TNXAQ16473 311 aa4.03□□□□□ -1.76
ATXN3-245ENST00000556958 MPV17LQ2QL34 196 aa4.03□□□□□ -1.76
ATXN3-245ENST00000556958 RPL39P5Q59GN2 51 aa4.03□□□□□ -1.76
ATXN3-245ENST00000556958 RNASE12Q5GAN4 147 aaKnown RBP4.03□□□□□ -1.76
ATXN3-245ENST00000556958 NHLRC3Q5JS37 347 aa4.03□□□□□ -1.76
ATXN3-245ENST00000556958 C1orf146Q5VVC0 180 aa4.03□□□□□ -1.76
ATXN3-245ENST00000556958 NXNL2Q5VZ03 156 aa4.03□□□□□ -1.76
ATXN3-245ENST00000556958 DMKNQ6E0U4 476 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-245ENST00000556958 OR2T5Q6IEZ7 315 aa4.03□□□□□ -1.76
ATXN3-245ENST00000556958 TMEM88Q6PEY1 159 aa4.03□□□□□ -1.76
ATXN3-245ENST00000556958 PLET1Q6UQ28 207 aa4.03□□□□□ -1.76
ATXN3-245ENST00000556958 GSG1LQ6UXU4 331 aa4.03□□□□□ -1.76
ATXN3-245ENST00000556958 PLEKHG7Q6ZR37 379 aa4.03□□□□□ -1.76
ATXN3-245ENST00000556958 BCDIN3DQ7Z5W3 292 aaKnown RBP4.03□□□□□ -1.76
ATXN3-245ENST00000556958 IQCF1Q8N6M8 205 aa4.03□□□□□ -1.76
ATXN3-245ENST00000556958 OR13C9Q8NGT0 318 aa4.03□□□□□ -1.76
ATXN3-245ENST00000556958 OR2T29Q8NH02 315 aa4.03□□□□□ -1.76
ATXN3-245ENST00000556958 GIPC3Q8TF64 312 aa4.03□□□□□ -1.76
ATXN3-245ENST00000556958 CANT1Q8WVQ1 401 aa4.03□□□□□ -1.76
ATXN3-245ENST00000556958 GIMAP1Q8WWP7 306 aa4.03□□□□□ -1.76
ATXN3-245ENST00000556958 SRSF12Q8WXF0 261 aaKnown RBP4.03□□□□□ -1.76
ATXN3-245ENST00000556958 CXorf58Q96LI9 332 aa4.03□□□□□ -1.76
ATXN3-245ENST00000556958 GPER1Q99527 375 aa4.03□□□□□ -1.76
ATXN3-245ENST00000556958 TMEM70Q9BUB7 260 aa4.03□□□□□ -1.76
ATXN3-245ENST00000556958 MAGT1Q9H0U3 335 aa4.03□□□□□ -1.76
ATXN3-245ENST00000556958 ZNF556Q9HAH1 456 aa4.03□□□□□ -1.76
ATXN3-245ENST00000556958 PAK1IP1Q9NWT1 392 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-245ENST00000556958 ZNF257Q9Y2Q1 563 aa4.03□□□□□ -1.76
ATXN3-245ENST00000556958 GMPPBQ9Y5P6 360 aa4.03□□□□□ -1.76
ATXN3-245ENST00000556958 DPPA5A6NC42 116 aa4.02□□□□□ -1.77
ATXN3-245ENST00000556958 METTL15A6NJ78 407 aa4.02□□□□□ -1.77
ATXN3-245ENST00000556958 K7EMT4 169 aa4.02□□□□□ -1.77
ATXN3-245ENST00000556958 GEMIN2O14893 280 aaKnown RBP4.02□□□□□ -1.77
ATXN3-245ENST00000556958 CREBL2O60519 120 aaPredicted RBP4.02□□□□□ -1.77
ATXN3-245ENST00000556958 SULT1C4O75897 302 aa4.02□□□□□ -1.77
ATXN3-245ENST00000556958 IGHV3-23P01764 117 aa4.02□□□□□ -1.77
ATXN3-245ENST00000556958 CRYGBP07316 175 aa4.02□□□□□ -1.77
ATXN3-245ENST00000556958 GIG44P09565 113 aaPredicted RBP4.02□□□□□ -1.77
ATXN3-245ENST00000556958 P0C879 139 aa4.02□□□□□ -1.77
ATXN3-245ENST00000556958 HIST1H1BP16401 226 aaKnown RBP4.02□□□□□ -1.77
ATXN3-245ENST00000556958 RCC1P18754 421 aaPredicted RBP4.02□□□□□ -1.77
ATXN3-245ENST00000556958 SLC2A5P22732 501 aa4.02□□□□□ -1.77
ATXN3-245ENST00000556958 RBM11P57052 281 aaKnown RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms