RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 UNQ5815/PRO19632Q6UWF5 114 aa17.83■□□□□ 0.44
TDP1-216ENST00000556867 ZNF818PQ6ZRF7 136 aa17.83■□□□□ 0.44
TDP1-216ENST00000556867 LFNGQ8NES3 379 aa17.83■□□□□ 0.44
TDP1-216ENST00000556867 OR6F1Q8NGZ6 308 aa17.83■□□□□ 0.44
TDP1-216ENST00000556867 GRPEL2Q8TAA5 225 aa17.83■□□□□ 0.44
TDP1-216ENST00000556867 C4orf3Q8WVX3 66 aa17.83■□□□□ 0.44
TDP1-216ENST00000556867 ABHD1Q96SE0 405 aa17.83■□□□□ 0.44
TDP1-216ENST00000556867 G3V4G9 280 aa17.82■□□□□ 0.44
TDP1-216ENST00000556867 CNIH1O95406 144 aa17.82■□□□□ 0.44
TDP1-216ENST00000556867 GNRHRP30968 328 aa17.82■□□□□ 0.44
TDP1-216ENST00000556867 GNB1P62873 340 aa17.82■□□□□ 0.44
TDP1-216ENST00000556867 CATR1Q13166 79 aa17.82■□□□□ 0.44
TDP1-216ENST00000556867 KIAA0141Q14154 515 aaPredicted RBP17.82■□□□□ 0.44
TDP1-216ENST00000556867 PRSS8Q16651 343 aa17.82■□□□□ 0.44
TDP1-216ENST00000556867 ACTBL2Q562R1 376 aa17.82■□□□□ 0.44
TDP1-216ENST00000556867 PYHIN1Q6K0P9 492 aa17.82■□□□□ 0.44
TDP1-216ENST00000556867 IDO2Q6ZQW0 420 aa17.82■□□□□ 0.44
TDP1-216ENST00000556867 C1QL4Q86Z23 238 aa17.82■□□□□ 0.44
TDP1-216ENST00000556867 LINC00482Q8N8I6 264 aa17.82■□□□□ 0.44
TDP1-216ENST00000556867 OR5M8Q8NGP6 311 aa17.82■□□□□ 0.44
TDP1-216ENST00000556867 OR52I2Q8NH67 350 aa17.82■□□□□ 0.44
TDP1-216ENST00000556867 UBE2E2Q96LR5 201 aa17.82■□□□□ 0.44
TDP1-216ENST00000556867 P2RX4Q99571 388 aa17.82■□□□□ 0.44
TDP1-216ENST00000556867 SLIRPQ9GZT3 109 aaKnown RBP17.82■□□□□ 0.44
TDP1-216ENST00000556867 FXYD6Q9H0Q3 95 aa17.82■□□□□ 0.44
TDP1-216ENST00000556867 RBFOX2O43251 390 aaKnown RBP eCLIP17.81■□□□□ 0.44
TDP1-216ENST00000556867 RAB9AP51151 201 aa17.81■□□□□ 0.44
TDP1-216ENST00000556867 RNASE12Q5GAN4 147 aaKnown RBP17.81■□□□□ 0.44
TDP1-216ENST00000556867 VAX1Q5SQQ9 334 aa17.81■□□□□ 0.44
TDP1-216ENST00000556867 MRPL41Q8IXM3 137 aaKnown RBP17.81■□□□□ 0.44
TDP1-216ENST00000556867 ZNF491Q8N8L2 437 aa17.81■□□□□ 0.44
TDP1-216ENST00000556867 RAX2Q96IS3 184 aa17.81■□□□□ 0.44
TDP1-216ENST00000556867 KLK11Q9UBX7 282 aa17.81■□□□□ 0.44
TDP1-216ENST00000556867 MTFP1Q9UDX5 166 aa17.81■□□□□ 0.44
TDP1-216ENST00000556867 CREBL2O60519 120 aaPredicted RBP17.8■□□□□ 0.44
TDP1-216ENST00000556867 DEFA6Q01524 100 aa17.8■□□□□ 0.44
TDP1-216ENST00000556867 KPRPQ5T749 579 aaPredicted RBP17.8■□□□□ 0.44
TDP1-216ENST00000556867 CCL24O00175 119 aa17.79■□□□□ 0.44
TDP1-216ENST00000556867 TSPAN5P62079 268 aa17.79■□□□□ 0.44
TDP1-216ENST00000556867 MRPS10P82664 201 aaKnown RBP17.79■□□□□ 0.44
TDP1-216ENST00000556867 BEAN1Q3B7T3 259 aa17.79■□□□□ 0.44
TDP1-216ENST00000556867 SPAG16Q8N0X2 631 aa17.79■□□□□ 0.44
TDP1-216ENST00000556867 VSTM2AQ8TAG5 236 aa17.79■□□□□ 0.44
TDP1-216ENST00000556867 TMEM68Q96MH6 324 aa17.79■□□□□ 0.44
TDP1-216ENST00000556867 C6orf62Q9GZU0 229 aaPredicted RBP17.79■□□□□ 0.44
TDP1-216ENST00000556867 RBM38Q9H0Z9 239 aaKnown RBP17.79■□□□□ 0.44
TDP1-216ENST00000556867 ZNF430Q9H8G1 570 aaPredicted RBP17.79■□□□□ 0.44
TDP1-216ENST00000556867 VSIG4Q9Y279 399 aa17.79■□□□□ 0.44
TDP1-216ENST00000556867 GABARAPH6UMI1 98 aa17.78■□□□□ 0.44
TDP1-216ENST00000556867 RAMP3O60896 148 aa17.78■□□□□ 0.44
TDP1-216ENST00000556867 HRASP01112 189 aa17.78■□□□□ 0.44
TDP1-216ENST00000556867 TBPP20226 339 aa17.78■□□□□ 0.44
TDP1-216ENST00000556867 RUNX1Q01196 453 aa17.78■□□□□ 0.44
TDP1-216ENST00000556867 TNXAQ16473 311 aa17.78■□□□□ 0.44
TDP1-216ENST00000556867 DEFB136Q30KP8 78 aa17.78■□□□□ 0.44
TDP1-216ENST00000556867 OXLD1Q5BKU9 147 aa17.78■□□□□ 0.44
TDP1-216ENST00000556867 AADACL3Q5VUY0 350 aa17.78■□□□□ 0.44
TDP1-216ENST00000556867 MMD2Q8IY49 270 aa17.78■□□□□ 0.44
TDP1-216ENST00000556867 VKORC1L1Q8N0U8 176 aa17.78■□□□□ 0.44
TDP1-216ENST00000556867 PUSL1Q8N0Z8 303 aaKnown RBP17.78■□□□□ 0.44
TDP1-216ENST00000556867 OR51H1Q8NH63 302 aa17.78■□□□□ 0.44
TDP1-216ENST00000556867 CD300LFQ8TDQ1 290 aa17.78■□□□□ 0.44
TDP1-216ENST00000556867 FCAMRQ8WWV6 532 aa17.78■□□□□ 0.44
TDP1-216ENST00000556867 DIRAS2Q96HU8 199 aa17.78■□□□□ 0.44
TDP1-216ENST00000556867 RCC1LQ96I51 464 aaKnown RBP17.78■□□□□ 0.44
TDP1-216ENST00000556867 RHOVQ96L33 236 aa17.78■□□□□ 0.44
TDP1-216ENST00000556867 DUX3Q96PT4 197 aa17.78■□□□□ 0.44
TDP1-216ENST00000556867 NXF2Q9GZY0 626 aaKnown RBP17.78■□□□□ 0.44
TDP1-216ENST00000556867 GNB4Q9HAV0 340 aa17.78■□□□□ 0.44
TDP1-216ENST00000556867 RABL2AQ9UBK7 228 aaPredicted RBP17.78■□□□□ 0.44
TDP1-216ENST00000556867 RABL2BQ9UNT1 228 aa17.78■□□□□ 0.44
TDP1-216ENST00000556867 M0QYG6 137 aa17.77■□□□□ 0.44
TDP1-216ENST00000556867 KBTBD11O94819 623 aa17.77■□□□□ 0.44
TDP1-216ENST00000556867 OR2A4O95047 310 aa17.77■□□□□ 0.44
TDP1-216ENST00000556867 DGCR2P98153 550 aa17.77■□□□□ 0.44
TDP1-216ENST00000556867 ASPHD1Q5U4P2 390 aa17.77■□□□□ 0.44
TDP1-216ENST00000556867 CMTM1Q8IZ96 169 aa17.77■□□□□ 0.44
TDP1-216ENST00000556867 TMEM167AQ8TBQ9 72 aa17.77■□□□□ 0.44
TDP1-216ENST00000556867 SRSF12Q8WXF0 261 aaKnown RBP17.77■□□□□ 0.44
TDP1-216ENST00000556867 OR2A7Q96R45 310 aa17.77■□□□□ 0.44
TDP1-216ENST00000556867 SLA2Q9H6Q3 261 aa17.77■□□□□ 0.44
TDP1-216ENST00000556867 CCDC160A6NGH7 325 aa17.76■□□□□ 0.43
TDP1-216ENST00000556867 H3BUA1 57 aa17.76■□□□□ 0.43
TDP1-216ENST00000556867 I3L521 148 aa17.76■□□□□ 0.43
TDP1-216ENST00000556867 GPR31O00270 319 aa17.76■□□□□ 0.43
TDP1-216ENST00000556867 PGLYRP1O75594 196 aaPredicted RBP17.76■□□□□ 0.43
TDP1-216ENST00000556867 ACTL6BO94805 426 aa17.76■□□□□ 0.43
TDP1-216ENST00000556867 DUS4LO95620 317 aaKnown RBP17.76■□□□□ 0.43
TDP1-216ENST00000556867 IGLL1P15814 213 aa17.76■□□□□ 0.43
TDP1-216ENST00000556867 CD40LGP29965 261 aa17.76■□□□□ 0.43
TDP1-216ENST00000556867 SSBP1Q04837 148 aaKnown RBP17.76■□□□□ 0.43
TDP1-216ENST00000556867 FHL3Q13643 280 aa17.76■□□□□ 0.43
TDP1-216ENST00000556867 RNASE10Q5GAN6 216 aaKnown RBP17.76■□□□□ 0.43
TDP1-216ENST00000556867 LPCAT3Q6P1A2 487 aa17.76■□□□□ 0.43
TDP1-216ENST00000556867 POC5Q8NA72 575 aa17.76■□□□□ 0.43
TDP1-216ENST00000556867 MCFD2Q8NI22 146 aa17.76■□□□□ 0.43
TDP1-216ENST00000556867 CASTOR1Q8WTX7 329 aa17.76■□□□□ 0.43
TDP1-216ENST00000556867 SMIM4Q8WVI0 70 aa17.76■□□□□ 0.43
TDP1-216ENST00000556867 AIFM2Q9BRQ8 373 aa17.76■□□□□ 0.43
TDP1-216ENST00000556867 CTDSPLO15194 276 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms