RNA–Protein interactions for RNA: ENST00000556707.5

SDR39U1-221, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,196 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-221ENST00000556707 G3V318 75 aa19.27■□□□□ 0.68
SDR39U1-221ENST00000556707 RBFOX2O43251 390 aaKnown RBP eCLIP19.27■□□□□ 0.688e-6■■■■□ 20.3
SDR39U1-221ENST00000556707 IGHG4P01861 327 aa19.27■□□□□ 0.68
SDR39U1-221ENST00000556707 FOXE3Q13461 319 aa19.27■□□□□ 0.68
SDR39U1-221ENST00000556707 LHFPL1Q86WI0 220 aa19.27■□□□□ 0.68
SDR39U1-221ENST00000556707 SPAG16Q8N0X2 631 aa19.27■□□□□ 0.68
SDR39U1-221ENST00000556707 OR4D10Q8NGI6 311 aa19.27■□□□□ 0.68
SDR39U1-221ENST00000556707 OR51H1Q8NH63 302 aa19.27■□□□□ 0.68
SDR39U1-221ENST00000556707 ABHD5Q8WTS1 349 aa19.27■□□□□ 0.68
SDR39U1-221ENST00000556707 A0A1W2PRX2 142 aa19.26■□□□□ 0.67
SDR39U1-221ENST00000556707 RAMP3O60896 148 aa19.26■□□□□ 0.67
SDR39U1-221ENST00000556707 PGLYRP1O75594 196 aaPredicted RBP19.26■□□□□ 0.67
SDR39U1-221ENST00000556707 ELANEP08246 267 aa19.26■□□□□ 0.67
SDR39U1-221ENST00000556707 SAA1P0DJI8 122 aaPredicted RBP19.26■□□□□ 0.67
SDR39U1-221ENST00000556707 EGR2P11161 476 aaPredicted RBP19.26■□□□□ 0.67
SDR39U1-221ENST00000556707 PPIFP30405 207 aaKnown RBP19.26■□□□□ 0.67
SDR39U1-221ENST00000556707 FXYD3Q14802 87 aa19.26■□□□□ 0.67
SDR39U1-221ENST00000556707 MRGPRG-AS1Q2M3A8 158 aa19.26■□□□□ 0.67
SDR39U1-221ENST00000556707 KHDC1LQ5JSQ8 128 aa19.26■□□□□ 0.67
SDR39U1-221ENST00000556707 IDO2Q6ZQW0 420 aa19.26■□□□□ 0.67
SDR39U1-221ENST00000556707 CCDC190Q86UF4 302 aa19.26■□□□□ 0.67
SDR39U1-221ENST00000556707 RNF152Q8N8N0 203 aa19.26■□□□□ 0.67
SDR39U1-221ENST00000556707 RSRP1Q9BUV0 290 aa19.26■□□□□ 0.67
SDR39U1-221ENST00000556707 NUBP2Q9Y5Y2 271 aa19.26■□□□□ 0.67
SDR39U1-221ENST00000556707 V9GYH0 126 aa19.26■□□□□ 0.67
SDR39U1-221ENST00000556707 ARPC1BO15143 372 aaKnown RBP19.25■□□□□ 0.67
SDR39U1-221ENST00000556707 RLN1P04808 185 aa19.25■□□□□ 0.67
SDR39U1-221ENST00000556707 SSBP2P81877 361 aaPredicted RBP19.25■□□□□ 0.67
SDR39U1-221ENST00000556707 MEF2DQ14814 521 aa19.25■□□□□ 0.67
SDR39U1-221ENST00000556707 C19orf54Q5BKX5 351 aa19.25■□□□□ 0.67
SDR39U1-221ENST00000556707 CXorf66Q5JRM2 361 aaPredicted RBP19.25■□□□□ 0.67
SDR39U1-221ENST00000556707 SLC38A6Q8IZM9 456 aa19.25■□□□□ 0.67
SDR39U1-221ENST00000556707 POC5Q8NA72 575 aa19.25■□□□□ 0.67
SDR39U1-221ENST00000556707 CD300LFQ8TDQ1 290 aa19.25■□□□□ 0.67
SDR39U1-221ENST00000556707 ARPC1AQ92747 370 aa19.25■□□□□ 0.67
SDR39U1-221ENST00000556707 ZFP57Q9NU63 452 aa19.25■□□□□ 0.67
SDR39U1-221ENST00000556707 CNIH1O95406 144 aa19.24■□□□□ 0.67
SDR39U1-221ENST00000556707 HRASP01112 189 aa19.24■□□□□ 0.67
SDR39U1-221ENST00000556707 AKAIN1P0CW23 69 aa19.24■□□□□ 0.67
SDR39U1-221ENST00000556707 PTBP1P26599 531 aaKnown RBP eCLIP19.24■□□□□ 0.67
SDR39U1-221ENST00000556707 S100GP29377 79 aa19.24■□□□□ 0.67
SDR39U1-221ENST00000556707 RPL23AP62750 156 aaKnown RBP19.24■□□□□ 0.67
SDR39U1-221ENST00000556707 GNB1P62873 340 aa19.24■□□□□ 0.67
SDR39U1-221ENST00000556707 TMEM267Q0VDI3 215 aaPredicted RBP19.24■□□□□ 0.67
SDR39U1-221ENST00000556707 PRSS8Q16651 343 aa19.24■□□□□ 0.67
SDR39U1-221ENST00000556707 ECSCRQ19T08 205 aa19.24■□□□□ 0.67
SDR39U1-221ENST00000556707 PHLDA2Q53GA4 152 aa19.24■□□□□ 0.67
SDR39U1-221ENST00000556707 MINDY2Q8NBR6 621 aa19.24■□□□□ 0.67
SDR39U1-221ENST00000556707 OR4F17Q8NGA8 305 aa19.24■□□□□ 0.67
SDR39U1-221ENST00000556707 FAM110DQ8TAY7 271 aaPredicted RBP19.24■□□□□ 0.67
SDR39U1-221ENST00000556707 RHOVQ96L33 236 aa19.24■□□□□ 0.67
SDR39U1-221ENST00000556707 OR4F4Q96R69 305 aa19.24■□□□□ 0.67
SDR39U1-221ENST00000556707 FAM103A1Q9BTL3 118 aaKnown RBP19.24■□□□□ 0.67
SDR39U1-221ENST00000556707 ANKRD20A5PA0PJZ0 165 aa19.23■□□□□ 0.67
SDR39U1-221ENST00000556707 ZNF735P0CB33 412 aa19.23■□□□□ 0.67
SDR39U1-221ENST00000556707 PSMB8P28062 276 aa19.23■□□□□ 0.67
SDR39U1-221ENST00000556707 AKIRIN2Q53H80 203 aa19.23■□□□□ 0.67
SDR39U1-221ENST00000556707 PYDC2Q56P42 97 aa19.23■□□□□ 0.67
SDR39U1-221ENST00000556707 VKORC1L1Q8N0U8 176 aa19.23■□□□□ 0.67
SDR39U1-221ENST00000556707 TCTEX1D1Q8N7M0 179 aa19.23■□□□□ 0.67
SDR39U1-221ENST00000556707 OR6Q1Q8NGQ2 317 aa19.23■□□□□ 0.67
SDR39U1-221ENST00000556707 TERB2Q8NHR7 220 aa19.23■□□□□ 0.67
SDR39U1-221ENST00000556707 GRPEL2Q8TAA5 225 aa19.23■□□□□ 0.67
SDR39U1-221ENST00000556707 VSTM2AQ8TAG5 236 aa19.23■□□□□ 0.67
SDR39U1-221ENST00000556707 R3HDM4Q96D70 268 aa19.23■□□□□ 0.67
SDR39U1-221ENST00000556707 AIFM2Q9BRQ8 373 aa19.23■□□□□ 0.67
SDR39U1-221ENST00000556707 CREBL2O60519 120 aaPredicted RBP19.22■□□□□ 0.67
SDR39U1-221ENST00000556707 HPRT1P00492 218 aa19.22■□□□□ 0.67
SDR39U1-221ENST00000556707 IGLV1-40P01703 118 aa19.22■□□□□ 0.67
SDR39U1-221ENST00000556707 RPLP1P05386 114 aaKnown RBP19.22■□□□□ 0.67
SDR39U1-221ENST00000556707 PGAM2P15259 253 aa19.22■□□□□ 0.67
SDR39U1-221ENST00000556707 F2RP25116 425 aa19.22■□□□□ 0.67
SDR39U1-221ENST00000556707 ETV6P41212 452 aa19.22■□□□□ 0.67
SDR39U1-221ENST00000556707 ZNF79Q15937 498 aa19.22■□□□□ 0.67
SDR39U1-221ENST00000556707 SPANXN2Q5MJ10 180 aa19.22■□□□□ 0.67
SDR39U1-221ENST00000556707 LCNL1Q6ZST4 164 aa19.22■□□□□ 0.67
SDR39U1-221ENST00000556707 PUSL1Q8N0Z8 303 aaKnown RBP19.22■□□□□ 0.67
SDR39U1-221ENST00000556707 LFNGQ8NES3 379 aa19.22■□□□□ 0.67
SDR39U1-221ENST00000556707 OR4C16Q8NGL9 310 aa19.22■□□□□ 0.67
SDR39U1-221ENST00000556707 THAP7Q9BT49 309 aaPredicted RBP19.22■□□□□ 0.67
SDR39U1-221ENST00000556707 ZNF430Q9H8G1 570 aaPredicted RBP19.22■□□□□ 0.67
SDR39U1-221ENST00000556707 PLEKHA2Q9HB19 425 aa19.22■□□□□ 0.67
SDR39U1-221ENST00000556707 FOXA2Q9Y261 457 aaPredicted RBP19.22■□□□□ 0.67
SDR39U1-221ENST00000556707 OR2A4O95047 310 aa19.21■□□□□ 0.67
SDR39U1-221ENST00000556707 TAS2R31P59538 309 aa19.21■□□□□ 0.67
SDR39U1-221ENST00000556707 SCGB2B2Q4G0G5 96 aa19.21■□□□□ 0.67
SDR39U1-221ENST00000556707 FAAP20Q6NZ36 180 aa19.21■□□□□ 0.67
SDR39U1-221ENST00000556707 UNQ5815/PRO19632Q6UWF5 114 aa19.21■□□□□ 0.67
SDR39U1-221ENST00000556707 MMD2Q8IY49 270 aa19.21■□□□□ 0.67
SDR39U1-221ENST00000556707 ZNF486Q96H40 463 aaPredicted RBP19.21■□□□□ 0.67
SDR39U1-221ENST00000556707 OR2A7Q96R45 310 aa19.21■□□□□ 0.67
SDR39U1-221ENST00000556707 NOTCH1P46531 2555 aa19.21■□□□□ 0.67
SDR39U1-221ENST00000556707 CMYA5Q8N3K9 4069 aa19.2■□□□□ 0.66
SDR39U1-221ENST00000556707 A0A1W2PN81 502 aa19.2■□□□□ 0.66
SDR39U1-221ENST00000556707 DISC1C4P0D8 188 aa19.2■□□□□ 0.66
SDR39U1-221ENST00000556707 KBTBD11O94819 623 aa19.2■□□□□ 0.66
SDR39U1-221ENST00000556707 CHRNA7P36544 502 aa19.2■□□□□ 0.66
SDR39U1-221ENST00000556707 PPP5CP53041 499 aa19.2■□□□□ 0.66
SDR39U1-221ENST00000556707 TNXAQ16473 311 aa19.2■□□□□ 0.66
SDR39U1-221ENST00000556707 SSX9Q7RTT3 188 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms