RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 CRYGBP07316 175 aa9.55□□□□□ -0.88
SHMT2-223ENST00000556689 ZNF182P17025 639 aaPredicted RBP9.55□□□□□ -0.88
SHMT2-223ENST00000556689 RPS27AP62979 156 aaKnown RBP9.55□□□□□ -0.88
SHMT2-223ENST00000556689 DEFB114Q30KQ6 69 aa9.55□□□□□ -0.88
SHMT2-223ENST00000556689 LRRTM1Q86UE6 522 aa9.55□□□□□ -0.88
SHMT2-223ENST00000556689 KCNG3Q8TAE7 436 aa9.55□□□□□ -0.88
SHMT2-223ENST00000556689 DYNLRB2Q8TF09 96 aa9.55□□□□□ -0.88
SHMT2-223ENST00000556689 PHB2Q99623 299 aa9.55□□□□□ -0.88
SHMT2-223ENST00000556689 TM2D1Q9BX74 207 aa9.55□□□□□ -0.88
SHMT2-223ENST00000556689 TMEM59Q9BXS4 323 aa9.55□□□□□ -0.88
SHMT2-223ENST00000556689 C6orf62Q9GZU0 229 aaPredicted RBP9.55□□□□□ -0.88
SHMT2-223ENST00000556689 PTTG2Q9NZH5 202 aa9.55□□□□□ -0.88
SHMT2-223ENST00000556689 MGAT4AQ9UM21 535 aa9.55□□□□□ -0.88
SHMT2-223ENST00000556689 ETV7Q9Y603 341 aa9.55□□□□□ -0.88
SHMT2-223ENST00000556689 SMIM30A4D0T7 59 aa9.54□□□□□ -0.88
SHMT2-223ENST00000556689 MSGN1A6NI15 193 aa9.54□□□□□ -0.88
SHMT2-223ENST00000556689 M0R1X1 148 aa9.54□□□□□ -0.88
SHMT2-223ENST00000556689 RGS5O15539 181 aa9.54□□□□□ -0.88
SHMT2-223ENST00000556689 SCGNO76038 276 aa9.54□□□□□ -0.88
SHMT2-223ENST00000556689 IGLV2-23P01705 113 aa9.54□□□□□ -0.88
SHMT2-223ENST00000556689 SCTP09683 121 aa9.54□□□□□ -0.88
SHMT2-223ENST00000556689 TGFBR1P36897 503 aa9.54□□□□□ -0.88
SHMT2-223ENST00000556689 TALDO1P37837 337 aa9.54□□□□□ -0.88
SHMT2-223ENST00000556689 RPS19P39019 145 aaKnown RBP9.54□□□□□ -0.88
SHMT2-223ENST00000556689 GUCA2BQ16661 112 aa9.54□□□□□ -0.88
SHMT2-223ENST00000556689 HES5Q5TA89 166 aa9.54□□□□□ -0.88
SHMT2-223ENST00000556689 MCFD2Q8NI22 146 aa9.54□□□□□ -0.88
SHMT2-223ENST00000556689 DYNC2LI1Q8TCX1 351 aa9.54□□□□□ -0.88
SHMT2-223ENST00000556689 NICN1Q9BSH3 213 aa9.54□□□□□ -0.88
SHMT2-223ENST00000556689 ST6GALNAC5Q9BVH7 336 aa9.54□□□□□ -0.88
SHMT2-223ENST00000556689 WFDC10AQ9H1F0 79 aa9.54□□□□□ -0.88
SHMT2-223ENST00000556689 FRAS1Q86XX4 4008 aa9.54□□□□□ -0.88
SHMT2-223ENST00000556689 BMPR1BO00238 502 aa9.53□□□□□ -0.88
SHMT2-223ENST00000556689 RBMXL2O75526 392 aaKnown RBP9.53□□□□□ -0.88
SHMT2-223ENST00000556689 OR9G9P0C7N8 305 aa9.53□□□□□ -0.88
SHMT2-223ENST00000556689 APELAP0DMC3 54 aa9.53□□□□□ -0.88
SHMT2-223ENST00000556689 KIR2DS2P43631 304 aa9.53□□□□□ -0.88
SHMT2-223ENST00000556689 OR10A3P58181 314 aa9.53□□□□□ -0.88
SHMT2-223ENST00000556689 HLA-DRB3P79483 266 aa9.53□□□□□ -0.88
SHMT2-223ENST00000556689 ATP5G2Q06055 141 aa9.53□□□□□ -0.88
SHMT2-223ENST00000556689 CNPY1Q3B7I2 92 aa9.53□□□□□ -0.88
SHMT2-223ENST00000556689 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.53□□□□□ -0.88
SHMT2-223ENST00000556689 ADAD2Q8NCV1 583 aaKnown RBP9.53□□□□□ -0.88
SHMT2-223ENST00000556689 HARBI1Q96MB7 349 aa9.53□□□□□ -0.88
SHMT2-223ENST00000556689 URM1Q9BTM9 101 aaKnown RBP9.53□□□□□ -0.88
SHMT2-223ENST00000556689 Q9N2K0 584 aa9.53□□□□□ -0.88
SHMT2-223ENST00000556689 AK3Q9UIJ7 227 aa9.53□□□□□ -0.88
SHMT2-223ENST00000556689 METTL21EPA6NDL7 271 aa9.52□□□□□ -0.89
SHMT2-223ENST00000556689 CXorf65A6NEN9 183 aa9.52□□□□□ -0.89
SHMT2-223ENST00000556689 FAM223BA6NKX1 122 aa9.52□□□□□ -0.89
SHMT2-223ENST00000556689 SHOXO15266 292 aa9.52□□□□□ -0.89
SHMT2-223ENST00000556689 FOLR2P14207 255 aa9.52□□□□□ -0.89
SHMT2-223ENST00000556689 RHOGP84095 191 aa9.52□□□□□ -0.89
SHMT2-223ENST00000556689 TAGLNQ01995 201 aaKnown RBP9.52□□□□□ -0.89
SHMT2-223ENST00000556689 CBX3Q13185 183 aa9.52□□□□□ -0.89
SHMT2-223ENST00000556689 UNC119Q13432 240 aa9.52□□□□□ -0.89
SHMT2-223ENST00000556689 UBE2NLQ5JXB2 153 aa9.52□□□□□ -0.89
SHMT2-223ENST00000556689 C1orf100Q5SVJ3 147 aa9.52□□□□□ -0.89
SHMT2-223ENST00000556689 SLC16A13Q7RTY0 426 aa9.52□□□□□ -0.89
SHMT2-223ENST00000556689 FAM223AQ8IWN6 122 aa9.52□□□□□ -0.89
SHMT2-223ENST00000556689 DDB2Q92466 427 aa9.52□□□□□ -0.89
SHMT2-223ENST00000556689 OVOL2Q9BRP0 275 aa9.52□□□□□ -0.89
SHMT2-223ENST00000556689 HDHD3Q9BSH5 251 aaPredicted RBP9.52□□□□□ -0.89
SHMT2-223ENST00000556689 AKIP1Q9NQ31 210 aa9.52□□□□□ -0.89
SHMT2-223ENST00000556689 RDH8Q9NYR8 311 aa9.52□□□□□ -0.89
SHMT2-223ENST00000556689 TECRQ9NZ01 308 aaKnown RBP9.52□□□□□ -0.89
SHMT2-223ENST00000556689 ZNF230Q9UIE0 474 aaPredicted RBP9.52□□□□□ -0.89
SHMT2-223ENST00000556689 HERC2O95714 4834 aa9.51□□□□□ -0.89
SHMT2-223ENST00000556689 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.51□□□□□ -0.89
SHMT2-223ENST00000556689 A0A0A6YYD4 124 aa9.51□□□□□ -0.89
SHMT2-223ENST00000556689 NUPR2A6NF83 97 aa9.51□□□□□ -0.89
SHMT2-223ENST00000556689 C2orf70A6NJV1 201 aa9.51□□□□□ -0.89
SHMT2-223ENST00000556689 SRRM4A7MD48 611 aaKnown RBP9.51□□□□□ -0.89
SHMT2-223ENST00000556689 TMEM14DPA8MWL7 114 aa9.51□□□□□ -0.89
SHMT2-223ENST00000556689 MPPED1O15442 326 aa9.51□□□□□ -0.89
SHMT2-223ENST00000556689 SOCS1O15524 211 aa9.51□□□□□ -0.89
SHMT2-223ENST00000556689 TUSC2O75896 110 aa9.51□□□□□ -0.89
SHMT2-223ENST00000556689 CLEC2LP0C7M8 214 aa9.51□□□□□ -0.89
SHMT2-223ENST00000556689 QRFPP83859 136 aa9.51□□□□□ -0.89
SHMT2-223ENST00000556689 PMS2P11Q13670 270 aa9.51□□□□□ -0.89
SHMT2-223ENST00000556689 EXOSC2Q13868 293 aaKnown RBP9.51□□□□□ -0.89
SHMT2-223ENST00000556689 P2RY14Q15391 338 aa9.51□□□□□ -0.89
SHMT2-223ENST00000556689 TMEM177Q53S58 311 aa9.51□□□□□ -0.89
SHMT2-223ENST00000556689 SAMD12Q8N8I0 201 aa9.51□□□□□ -0.89
SHMT2-223ENST00000556689 TEX45Q8NA69 505 aa9.51□□□□□ -0.89
SHMT2-223ENST00000556689 LGALS14Q8TCE9 139 aa9.51□□□□□ -0.89
SHMT2-223ENST00000556689 FAM3DQ96BQ1 224 aa9.51□□□□□ -0.89
SHMT2-223ENST00000556689 WDR89Q96FK6 387 aaPredicted RBP9.51□□□□□ -0.89
SHMT2-223ENST00000556689 ZC4H2Q9NQZ6 224 aa9.51□□□□□ -0.89
SHMT2-223ENST00000556689 A0A075B6Q4 140 aa9.5□□□□□ -0.89
SHMT2-223ENST00000556689 TRBV9A0A0B4J1U6 114 aa9.5□□□□□ -0.89
SHMT2-223ENST00000556689 IGKV1-6A0A0C4DH72 117 aa9.5□□□□□ -0.89
SHMT2-223ENST00000556689 FAM25AB3EWG3 89 aa9.5□□□□□ -0.89
SHMT2-223ENST00000556689 FAM25CB3EWG5 89 aa9.5□□□□□ -0.89
SHMT2-223ENST00000556689 FAM25GB3EWG6 89 aa9.5□□□□□ -0.89
SHMT2-223ENST00000556689 TRDCB7Z8K6 153 aa9.5□□□□□ -0.89
SHMT2-223ENST00000556689 PRH1P02810 166 aa9.5□□□□□ -0.89
SHMT2-223ENST00000556689 RRASP10301 218 aa9.5□□□□□ -0.89
SHMT2-223ENST00000556689 RAB6AP20340 208 aa9.5□□□□□ -0.89
SHMT2-223ENST00000556689 TNXAQ16473 311 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms