RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 TP53RKQ96S44 253 aa9.01□□□□□ -0.97
FOXN3-212ENST00000556541 GPN1Q9HCN4 374 aaPredicted RBP9.01□□□□□ -0.97
FOXN3-212ENST00000556541 BET1LQ9NYM9 111 aa9.01□□□□□ -0.97
FOXN3-212ENST00000556541 FLVCR2Q9UPI3 526 aa9.01□□□□□ -0.97
FOXN3-212ENST00000556541 MDFIC2A0A1B0GVS7 189 aa9□□□□□ -0.97
FOXN3-212ENST00000556541 H7C2Y5 167 aa9□□□□□ -0.97
FOXN3-212ENST00000556541 CREBL2O60519 120 aaPredicted RBP9□□□□□ -0.97
FOXN3-212ENST00000556541 RAMP3O60896 148 aa9□□□□□ -0.97
FOXN3-212ENST00000556541 CRYZL1O95825 349 aa9□□□□□ -0.97
FOXN3-212ENST00000556541 IGLV2-23P01705 113 aa9□□□□□ -0.97
FOXN3-212ENST00000556541 RNASE1P07998 156 aaKnown RBP9□□□□□ -0.97
FOXN3-212ENST00000556541 P0C879 139 aa9□□□□□ -0.97
FOXN3-212ENST00000556541 TMEM11P17152 192 aa9□□□□□ -0.97
FOXN3-212ENST00000556541 ANXA7P20073 488 aaKnown RBP9□□□□□ -0.97
FOXN3-212ENST00000556541 LINC00205P59089 165 aa9□□□□□ -0.97
FOXN3-212ENST00000556541 TRIM16LQ309B1 348 aa9□□□□□ -0.97
FOXN3-212ENST00000556541 PUSL1Q8N0Z8 303 aaKnown RBP9□□□□□ -0.97
FOXN3-212ENST00000556541 LGI3Q8N145 548 aa9□□□□□ -0.97
FOXN3-212ENST00000556541 FAM71E2Q8N5Q1 922 aa9□□□□□ -0.97
FOXN3-212ENST00000556541 ZNF431Q8TF32 576 aaPredicted RBP9□□□□□ -0.97
FOXN3-212ENST00000556541 LSM10Q969L4 123 aaKnown RBP9□□□□□ -0.97
FOXN3-212ENST00000556541 HARBI1Q96MB7 349 aa9□□□□□ -0.97
FOXN3-212ENST00000556541 RANBP3Q9H6Z4 567 aaPredicted RBP9□□□□□ -0.97
FOXN3-212ENST00000556541 PLSCR3Q9NRY6 295 aa9□□□□□ -0.97
FOXN3-212ENST00000556541 CACFD1Q9UGQ2 172 aa9□□□□□ -0.97
FOXN3-212ENST00000556541 ZNF580Q9UK33 172 aa9□□□□□ -0.97
FOXN3-212ENST00000556541 MOB4Q9Y3A3 225 aa9□□□□□ -0.97
FOXN3-212ENST00000556541 SOX21Q9Y651 276 aaPredicted RBP9□□□□□ -0.97
FOXN3-212ENST00000556541 TRAV6A0A075B6T7 132 aa8.99□□□□□ -0.97
FOXN3-212ENST00000556541 IGHV3-72A0A0B4J1Y9 119 aa8.99□□□□□ -0.97
FOXN3-212ENST00000556541 RRHO14718 337 aa8.99□□□□□ -0.97
FOXN3-212ENST00000556541 SHOXO15266 292 aa8.99□□□□□ -0.97
FOXN3-212ENST00000556541 NBR2O15453 112 aa8.99□□□□□ -0.97
FOXN3-212ENST00000556541 HOXA3O43365 443 aaPredicted RBP8.99□□□□□ -0.97
FOXN3-212ENST00000556541 IGHV4-59P01825 116 aa8.99□□□□□ -0.97
FOXN3-212ENST00000556541 HLA-AP01891 365 aaKnown RBP8.99□□□□□ -0.97
FOXN3-212ENST00000556541 CRYGBP07316 175 aa8.99□□□□□ -0.97
FOXN3-212ENST00000556541 SLC25A6P12236 298 aa8.99□□□□□ -0.97
FOXN3-212ENST00000556541 VDAC1P21796 283 aa8.99□□□□□ -0.97
FOXN3-212ENST00000556541 LPAR6P43657 344 aa8.99□□□□□ -0.97
FOXN3-212ENST00000556541 RPS16P62249 146 aaKnown RBP8.99□□□□□ -0.97
FOXN3-212ENST00000556541 SLC9A3R2Q15599 337 aa8.99□□□□□ -0.97
FOXN3-212ENST00000556541 VMA21Q3ZAQ7 101 aa8.99□□□□□ -0.97
FOXN3-212ENST00000556541 AARDQ4LEZ3 155 aa8.99□□□□□ -0.97
FOXN3-212ENST00000556541 C4orf46Q504U0 113 aa8.99□□□□□ -0.97
FOXN3-212ENST00000556541 Q71RC1 249 aaPredicted RBP8.99□□□□□ -0.97
FOXN3-212ENST00000556541 COQ8AQ8NI60 647 aa8.99□□□□□ -0.97
FOXN3-212ENST00000556541 C22orf15Q8WYQ4 148 aa8.99□□□□□ -0.97
FOXN3-212ENST00000556541 SEC22AQ96IW7 307 aa8.99□□□□□ -0.97
FOXN3-212ENST00000556541 RHOVQ96L33 236 aa8.99□□□□□ -0.97
FOXN3-212ENST00000556541 GPHA2Q96T91 129 aa8.99□□□□□ -0.97
FOXN3-212ENST00000556541 SLC25A33Q9BSK2 321 aa8.99□□□□□ -0.97
FOXN3-212ENST00000556541 SVEP1Q4LDE5 3571 aa8.99□□□□□ -0.97
FOXN3-212ENST00000556541 DNAJC9-AS1A6NH13 148 aa8.98□□□□□ -0.97
FOXN3-212ENST00000556541 DBX1A6NMT0 343 aa8.98□□□□□ -0.97
FOXN3-212ENST00000556541 MARCH11A6NNE9 402 aa8.98□□□□□ -0.97
FOXN3-212ENST00000556541 TCF21O43680 179 aa8.98□□□□□ -0.97
FOXN3-212ENST00000556541 S1PR2O95136 353 aa8.98□□□□□ -0.97
FOXN3-212ENST00000556541 IGKV1-39P01597 117 aa8.98□□□□□ -0.97
FOXN3-212ENST00000556541 HLA-DRB1P01911 266 aa8.98□□□□□ -0.97
FOXN3-212ENST00000556541 IGKV1D-39P04432 117 aa8.98□□□□□ -0.97
FOXN3-212ENST00000556541 SPNP16150 400 aa8.98□□□□□ -0.97
FOXN3-212ENST00000556541 HLA-GP17693 338 aa8.98□□□□□ -0.97
FOXN3-212ENST00000556541 VAMP1P23763 118 aa8.98□□□□□ -0.97
FOXN3-212ENST00000556541 MAS1LP35410 378 aa8.98□□□□□ -0.97
FOXN3-212ENST00000556541 ERVK-16P61578 105 aa8.98□□□□□ -0.97
FOXN3-212ENST00000556541 HES1Q14469 280 aa8.98□□□□□ -0.97
FOXN3-212ENST00000556541 PSG5Q15238 335 aa8.98□□□□□ -0.97
FOXN3-212ENST00000556541 C5orf64Q2M2E5 130 aa8.98□□□□□ -0.97
FOXN3-212ENST00000556541 SELENOHQ8IZQ5 122 aaKnown RBP8.98□□□□□ -0.97
FOXN3-212ENST00000556541 C5orf56Q8N8D9 126 aa8.98□□□□□ -0.97
FOXN3-212ENST00000556541 Q8N9W7 124 aa8.98□□□□□ -0.97
FOXN3-212ENST00000556541 TMEM167AQ8TBQ9 72 aa8.98□□□□□ -0.97
FOXN3-212ENST00000556541 R3HDM4Q96D70 268 aa8.98□□□□□ -0.97
FOXN3-212ENST00000556541 PHB2Q99623 299 aa8.98□□□□□ -0.97
FOXN3-212ENST00000556541 COA4Q9NYJ1 87 aa8.98□□□□□ -0.97
FOXN3-212ENST00000556541 KIAA1456Q9P272 454 aa8.98□□□□□ -0.97
FOXN3-212ENST00000556541 TMED3Q9Y3Q3 217 aa8.98□□□□□ -0.97
FOXN3-212ENST00000556541 MMP24Q9Y5R2 645 aa8.98□□□□□ -0.97
FOXN3-212ENST00000556541 TNCP24821 2201 aa8.97□□□□□ -0.97
FOXN3-212ENST00000556541 SRRM4A7MD48 611 aaKnown RBP8.97□□□□□ -0.97
FOXN3-212ENST00000556541 KBTBD11O94819 623 aa8.97□□□□□ -0.97
FOXN3-212ENST00000556541 OR2A4O95047 310 aa8.97□□□□□ -0.97
FOXN3-212ENST00000556541 SAA1P0DJI8 122 aaPredicted RBP8.97□□□□□ -0.97
FOXN3-212ENST00000556541 PAX6P26367 422 aa8.97□□□□□ -0.97
FOXN3-212ENST00000556541 RAB25P57735 213 aa8.97□□□□□ -0.97
FOXN3-212ENST00000556541 UBA52P62987 128 aaKnown RBP8.97□□□□□ -0.97
FOXN3-212ENST00000556541 MMDQ15546 238 aa8.97□□□□□ -0.97
FOXN3-212ENST00000556541 TATDN3Q17R31 274 aa8.97□□□□□ -0.97
FOXN3-212ENST00000556541 ANKRD55Q3KP44 614 aa8.97□□□□□ -0.97
FOXN3-212ENST00000556541 NMSQ5H8A3 153 aa8.97□□□□□ -0.97
FOXN3-212ENST00000556541 ZNF695Q8IW36 515 aa8.97□□□□□ -0.97
FOXN3-212ENST00000556541 FOXRED2Q8IWF2 684 aa8.97□□□□□ -0.97
FOXN3-212ENST00000556541 Q8N2B8 174 aa8.97□□□□□ -0.97
FOXN3-212ENST00000556541 LHFPL5Q8TAF8 219 aa8.97□□□□□ -0.97
FOXN3-212ENST00000556541 OR2A7Q96R45 310 aa8.97□□□□□ -0.97
FOXN3-212ENST00000556541 CHIAQ9BZP6 476 aa8.97□□□□□ -0.97
FOXN3-212ENST00000556541 ESM1Q9NQ30 184 aa8.97□□□□□ -0.97
FOXN3-212ENST00000556541 SIGLEC9Q9Y336 463 aa8.97□□□□□ -0.97
FOXN3-212ENST00000556541 TRIM77I1YAP6 450 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms