RNA–Protein interactions for RNA: ENST00000556507.1

TGFB3-205, Transcript of transforming growth factor beta 3, humanhuman

TSL 3

Gene TGFB3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-205ENST00000556507 CGAP01215 116 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 IFNA1P01562 189 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 HBZP02008 142 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 S100A8P05109 93 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 S100A6P06703 90 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 METTL15P1P0C7V9 234 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 P0C879 139 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 RAB5AP20339 215 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 AGAP20933 346 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 PRDX2P32119 198 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 MPV17P39210 176 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 OR3A1P47881 315 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 FABP6P51161 128 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 UBE2KP61086 200 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 ERVS71-1P61550 626 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 GNB2P62879 340 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 PMP22Q01453 160 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 TNFRSF9Q07011 255 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 PNRC1Q12796 327 aaPredicted RBP3.31□□□□□ -1.88
TGFB3-205ENST00000556507 HAGHQ16775 308 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 EIF2S3LQ2VIR3 472 aaKnown RBP3.31□□□□□ -1.88
TGFB3-205ENST00000556507 SMIM21Q3B7S5 101 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 ALKBH6Q3KRA9 238 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 AARDQ4LEZ3 155 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 AKIRIN2Q53H80 203 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 TMEM41BQ5BJD5 291 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 SPANXN5Q5MJ07 72 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 LCE1AQ5T7P2 110 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 ATP1A1-AS1Q5TC04 95 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 DGAT2L7PQ6IED9 249 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 ETFRF1Q6IPR1 90 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 WDR82Q6UXN9 313 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 TMEM14EPQ6UXP3 125 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 RBMS3Q6XE24 437 aaKnown RBP3.31□□□□□ -1.88
TGFB3-205ENST00000556507 BHLHA15Q7RTS1 189 aaPredicted RBP3.31□□□□□ -1.88
TGFB3-205ENST00000556507 VASH2Q86V25 355 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 ZNF429Q86V71 674 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 MYPOPQ86VE0 399 aaPredicted RBP3.31□□□□□ -1.88
TGFB3-205ENST00000556507 GCNT2Q8N0V5 402 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 ZADH2Q8N4Q0 377 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 ZNF525Q8N782 197 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 LINC00469Q8N7U9 141 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 OR1L1Q8NH94 360 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 TAF15Q92804 592 aaKnown RBP eCLIP3.31□□□□□ -1.88
TGFB3-205ENST00000556507 STARD4Q96DR4 205 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 TVP23CQ96ET8 276 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 OR4C12Q96R67 309 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 TAAR6Q96RI8 345 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 HSD17B10Q99714 261 aaKnown RBP3.31□□□□□ -1.88
TGFB3-205ENST00000556507 NIPSNAP3BQ9BS92 247 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 WDR61Q9GZS3 305 aaKnown RBP3.31□□□□□ -1.88
TGFB3-205ENST00000556507 RBKSQ9H477 322 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 RAB9BQ9NP90 201 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 ASCL3Q9NQ33 180 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 ZNF71Q9NQZ8 489 aaPredicted RBP3.31□□□□□ -1.88
TGFB3-205ENST00000556507 RPRMQ9NS64 109 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 SLC39A9Q9NUM3 307 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 BEX4Q9NWD9 120 aaPredicted RBP3.31□□□□□ -1.88
TGFB3-205ENST00000556507 TMEM242Q9NWH2 141 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 CISD1Q9NZ45 108 aaKnown RBP3.31□□□□□ -1.88
TGFB3-205ENST00000556507 HSPB7Q9UBY9 170 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 VAX2Q9UIW0 290 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 PROCRQ9UNN8 238 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 GAB2Q9UQC2 676 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 PUS1Q9Y606 427 aaKnown RBP eCLIP3.31□□□□□ -1.88
TGFB3-205ENST00000556507 CDH23Q9H251 3354 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 KNL1Q8NG31 2342 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 UNC80Q8N2C7 3258 aa3.31□□□□□ -1.88
TGFB3-205ENST00000556507 ASCC3Q8N3C0 2202 aaKnown RBP3.3□□□□□ -1.88
TGFB3-205ENST00000556507 SDK2Q58EX2 2172 aa3.3□□□□□ -1.88
TGFB3-205ENST00000556507 IGHV2OR16-5A0A0B4J2B6 119 aa3.3□□□□□ -1.88
TGFB3-205ENST00000556507 IGHV1-18A0A0C4DH31 117 aa3.3□□□□□ -1.88
TGFB3-205ENST00000556507 MBD3L5A6NJ08 208 aaPredicted RBP3.3□□□□□ -1.88
TGFB3-205ENST00000556507 ITGB1BP1O14713 200 aa3.3□□□□□ -1.88
TGFB3-205ENST00000556507 WNT9BO14905 357 aa3.3□□□□□ -1.88
TGFB3-205ENST00000556507 CYB5BO43169 146 aa3.3□□□□□ -1.88
TGFB3-205ENST00000556507 YPEL1O60688 119 aa3.3□□□□□ -1.88
TGFB3-205ENST00000556507 PTBP3O95758 552 aaKnown RBP3.3□□□□□ -1.88
TGFB3-205ENST00000556507 KRASP01116 189 aa3.3□□□□□ -1.88
TGFB3-205ENST00000556507 IGHV3-13P01766 116 aa3.3□□□□□ -1.88
TGFB3-205ENST00000556507 S100A9P06702 114 aaKnown RBP3.3□□□□□ -1.88
TGFB3-205ENST00000556507 CECR9P0C854 216 aa3.3□□□□□ -1.88
TGFB3-205ENST00000556507 IAPPP10997 89 aa3.3□□□□□ -1.88
TGFB3-205ENST00000556507 AKR1C3P42330 323 aa3.3□□□□□ -1.88
TGFB3-205ENST00000556507 RPL35P42766 123 aaKnown RBP3.3□□□□□ -1.88
TGFB3-205ENST00000556507 GABRA2P47869 451 aa3.3□□□□□ -1.88
TGFB3-205ENST00000556507 GLIPR1P48060 266 aa3.3□□□□□ -1.88
TGFB3-205ENST00000556507 AKR1D1P51857 326 aa3.3□□□□□ -1.88
TGFB3-205ENST00000556507 SNRPEP62304 92 aaKnown RBP3.3□□□□□ -1.88
TGFB3-205ENST00000556507 DLK1P80370 383 aa3.3□□□□□ -1.88
TGFB3-205ENST00000556507 S100A12P80511 92 aa3.3□□□□□ -1.88
TGFB3-205ENST00000556507 RUNX1Q01196 453 aa3.3□□□□□ -1.88
TGFB3-205ENST00000556507 AESQ08117 197 aa3.3□□□□□ -1.88
TGFB3-205ENST00000556507 SLC38A11Q08AI6 406 aa3.3□□□□□ -1.88
TGFB3-205ENST00000556507 ARL16Q0P5N6 197 aa3.3□□□□□ -1.88
TGFB3-205ENST00000556507 TMEM267Q0VDI3 215 aaPredicted RBP3.3□□□□□ -1.88
TGFB3-205ENST00000556507 DEFB109BQ30KR1 87 aa3.3□□□□□ -1.88
TGFB3-205ENST00000556507 TIMM23BQ5SRD1 257 aa3.3□□□□□ -1.88
TGFB3-205ENST00000556507 ADAM5Q6NVV9 412 aa3.3□□□□□ -1.88
TGFB3-205ENST00000556507 CLEC2AQ6UVW9 174 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms