RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 HEYLQ9NQ87 328 aaPredicted RBP4.32□□□□□ -1.72
TMEM260-210ENST00000556422 ELOVL5Q9NYP7 299 aa4.32□□□□□ -1.72
TMEM260-210ENST00000556422 AK3Q9UIJ7 227 aa4.32□□□□□ -1.72
TMEM260-210ENST00000556422 LAMP3Q9UQV4 416 aa4.32□□□□□ -1.72
TMEM260-210ENST00000556422 IGKV1-27A0A075B6S5 117 aa4.32□□□□□ -1.72
TMEM260-210ENST00000556422 IGKV3D-15A0A087WSY6 115 aa4.32□□□□□ -1.72
TMEM260-210ENST00000556422 CENPVL3A0A0U1RRI6 287 aa4.32□□□□□ -1.72
TMEM260-210ENST00000556422 TMEM213A2RRL7 107 aa4.32□□□□□ -1.72
TMEM260-210ENST00000556422 TMEM189A5PLL7 270 aa4.32□□□□□ -1.72
TMEM260-210ENST00000556422 OR5B21A6NL26 309 aa4.32□□□□□ -1.72
TMEM260-210ENST00000556422 ORM1P02763 201 aa4.32□□□□□ -1.72
TMEM260-210ENST00000556422 TRGC2P03986 189 aa4.32□□□□□ -1.72
TMEM260-210ENST00000556422 HIST1H1DP16402 221 aaKnown RBP4.32□□□□□ -1.72
TMEM260-210ENST00000556422 ZNF708P17019 499 aa4.32□□□□□ -1.72
TMEM260-210ENST00000556422 CHATP28329 748 aa4.32□□□□□ -1.72
TMEM260-210ENST00000556422 MAGEA5P43359 124 aa4.32□□□□□ -1.72
TMEM260-210ENST00000556422 GNG5P63218 68 aa4.32□□□□□ -1.72
TMEM260-210ENST00000556422 OR1C1Q15619 314 aa4.32□□□□□ -1.72
TMEM260-210ENST00000556422 CD300EQ496F6 205 aaPredicted RBP4.32□□□□□ -1.72
TMEM260-210ENST00000556422 UTF1Q5T230 341 aa4.32□□□□□ -1.72
TMEM260-210ENST00000556422 ATP1A1-AS1Q5TC04 95 aa4.32□□□□□ -1.72
TMEM260-210ENST00000556422 AAED1Q7RTV5 226 aa4.32□□□□□ -1.72
TMEM260-210ENST00000556422 PRSS33Q8NF86 280 aa4.32□□□□□ -1.72
TMEM260-210ENST00000556422 SDSLQ96GA7 329 aa4.32□□□□□ -1.72
TMEM260-210ENST00000556422 ARHGAP5-AS1Q96IT6 56 aa4.32□□□□□ -1.72
TMEM260-210ENST00000556422 UHRF2Q96PU4 802 aa4.32□□□□□ -1.72
TMEM260-210ENST00000556422 FAM173AQ9BQD7 235 aa4.32□□□□□ -1.72
TMEM260-210ENST00000556422 SLC25A21Q9BQT8 299 aaPredicted RBP4.32□□□□□ -1.72
TMEM260-210ENST00000556422 TMEM59Q9BXS4 323 aa4.32□□□□□ -1.72
TMEM260-210ENST00000556422 PEMTQ9UBM1 199 aa4.32□□□□□ -1.72
TMEM260-210ENST00000556422 PKIGQ9Y2B9 76 aa4.32□□□□□ -1.72
TMEM260-210ENST00000556422 ZNF503-AS2A6NEH8 195 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 IL18BPO95998 194 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 IGHV3-9P01782 118 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 TRGC1P0CF51 173 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 FOXG1P55316 489 aaPredicted RBP4.31□□□□□ -1.72
TMEM260-210ENST00000556422 DHRS2Q13268 280 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 TSPO2Q5TGU0 170 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 PRSS54Q6PEW0 395 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 FGFRL1Q8N441 504 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 SUMF1Q8NBK3 374 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 OR2G3Q8NGZ4 309 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 BAALCQ8WXS3 180 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 PP6455Q8WZ26 134 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 GPR35Q9HC97 309 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 BOKQ9UMX3 212 aaPredicted RBP4.31□□□□□ -1.72
TMEM260-210ENST00000556422 LOC100509620A0A075B734 347 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 KIR2DL5BA0A0G2JN68 375 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 KIR2DL5BA0A0G2JPC4 375 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 GAGE12JA6NER3 117 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 ZNF724A8MTY0 619 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 GAGE7O76087 117 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 NDUFB8O95169 186 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 GAPDHP04406 335 aaKnown RBP4.31□□□□□ -1.72
TMEM260-210ENST00000556422 GAGE12FP0CL80 117 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 GAGE12GP0CL81 117 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 GAGE12IP0CL82 117 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 MGMTP16455 207 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 EGR1P18146 543 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 ID3Q02535 119 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 GAGE4Q13068 117 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 LRRC75BQ2VPJ9 315 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 SPATA31B1PQ5VZV4 182 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 MOB3CQ70IA8 216 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 KIR2DL5AQ8N109 375 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 ZNF808Q8N4W9 903 aaPredicted RBP4.31□□□□□ -1.72
TMEM260-210ENST00000556422 MDS2Q8NDY4 140 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 OR1F12Q8NHA8 337 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 EMG1Q92979 244 aaKnown RBP4.31□□□□□ -1.72
TMEM260-210ENST00000556422 GPR146Q96CH1 333 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 OR2H1Q9GZK4 316 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 CST11Q9H112 138 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 TMEM9BQ9NQ34 198 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 SERTAD4Q9NUC0 356 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 COMMD9Q9P000 198 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 ZNF581Q9P0T4 197 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 PRR14LQ5THK1 2151 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 FAM166BA8MTA8 275 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 FCGR2BP31994 310 aaPredicted RBP4.31□□□□□ -1.72
TMEM260-210ENST00000556422 THBS3P49746 956 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 SRSF4Q08170 494 aaKnown RBP4.31□□□□□ -1.72
TMEM260-210ENST00000556422 SPEM2Q0P670 501 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 DAZAP2Q15038 168 aaPredicted RBP4.31□□□□□ -1.72
TMEM260-210ENST00000556422 TMEM42Q69YG0 159 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 TMEM183AQ8IXX5 376 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 OR8G5Q8NG78 346 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 SPTSSAQ969W0 71 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 C10orf35Q96D05 121 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 TM2D1Q9BX74 207 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 AURKAIP1Q9NWT8 199 aaPredicted RBP4.31□□□□□ -1.72
TMEM260-210ENST00000556422 UQCR10Q9UDW1 63 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 TCF19Q9Y242 345 aa4.31□□□□□ -1.72
TMEM260-210ENST00000556422 ARID1AO14497 2285 aa4.3□□□□□ -1.72
TMEM260-210ENST00000556422 TRAV14DV4A0A0A6YYC5 116 aa4.3□□□□□ -1.72
TMEM260-210ENST00000556422 KIR2DS1A0A191URI9 304 aa4.3□□□□□ -1.72
TMEM260-210ENST00000556422 A0A1W2PRE2 83 aa4.3□□□□□ -1.72
TMEM260-210ENST00000556422 CEACAM18A8MTB9 384 aa4.3□□□□□ -1.72
TMEM260-210ENST00000556422 H3BQ15 152 aa4.3□□□□□ -1.72
TMEM260-210ENST00000556422 IL2RAP01589 272 aa4.3□□□□□ -1.72
TMEM260-210ENST00000556422 KIR2DS4P43632 304 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms