RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 OR2V2Q96R30 315 aa12.74□□□□□ -0.37
ARHGEF40-207ENST00000556399 CACNA1DQ01668 2161 aa12.74□□□□□ -0.37
ARHGEF40-207ENST00000556399 TRBV24-1A0A075B6N3 115 aa12.73□□□□□ -0.37
ARHGEF40-207ENST00000556399 C12orf77C9JDV5 145 aa12.73□□□□□ -0.37
ARHGEF40-207ENST00000556399 SNRPCP09234 159 aaKnown RBP12.73□□□□□ -0.37
ARHGEF40-207ENST00000556399 MBD3L1Q8WWY6 194 aa12.73□□□□□ -0.37
ARHGEF40-207ENST00000556399 RNF166Q96A37 237 aaPredicted RBP12.73□□□□□ -0.37
ARHGEF40-207ENST00000556399 WBP1Q96G27 269 aa12.73□□□□□ -0.37
ARHGEF40-207ENST00000556399 TPRP12270 2363 aaKnown RBP12.73□□□□□ -0.37
ARHGEF40-207ENST00000556399 C17orf98A8MV24 154 aa12.73□□□□□ -0.37
ARHGEF40-207ENST00000556399 NDUFS6O75380 124 aaKnown RBP12.73□□□□□ -0.37
ARHGEF40-207ENST00000556399 HLA-DQA1P01909 254 aa12.73□□□□□ -0.37
ARHGEF40-207ENST00000556399 CRYBB3P26998 211 aa12.73□□□□□ -0.37
ARHGEF40-207ENST00000556399 MPV17P39210 176 aa12.73□□□□□ -0.37
ARHGEF40-207ENST00000556399 CYB5R2Q6BCY4 276 aa12.73□□□□□ -0.37
ARHGEF40-207ENST00000556399 PPP1R32Q7Z5V6 425 aa12.73□□□□□ -0.37
ARHGEF40-207ENST00000556399 C1orf210Q8IVY1 113 aa12.73□□□□□ -0.37
ARHGEF40-207ENST00000556399 RND1Q92730 232 aa12.73□□□□□ -0.37
ARHGEF40-207ENST00000556399 SPSB4Q96A44 273 aa12.73□□□□□ -0.37
ARHGEF40-207ENST00000556399 C1orf147Q96MC9 270 aaPredicted RBP12.73□□□□□ -0.37
ARHGEF40-207ENST00000556399 IER2Q9BTL4 223 aa12.73□□□□□ -0.37
ARHGEF40-207ENST00000556399 TMEM242Q9NWH2 141 aa12.73□□□□□ -0.37
ARHGEF40-207ENST00000556399 DENND4CQ5VZ89 1909 aa12.73□□□□□ -0.37
ARHGEF40-207ENST00000556399 ISLRO14498 428 aa12.73□□□□□ -0.37
ARHGEF40-207ENST00000556399 SMPD2O60906 423 aa12.73□□□□□ -0.37
ARHGEF40-207ENST00000556399 NHLH1Q02575 133 aa12.73□□□□□ -0.37
ARHGEF40-207ENST00000556399 YTHDF2Q9Y5A9 579 aaKnown RBP12.73□□□□□ -0.37
ARHGEF40-207ENST00000556399 WIPF3A6NGB9 483 aa12.73□□□□□ -0.37
ARHGEF40-207ENST00000556399 NRN1LQ496H8 165 aa12.73□□□□□ -0.37
ARHGEF40-207ENST00000556399 IMMP2LQ96T52 175 aa12.73□□□□□ -0.37
ARHGEF40-207ENST00000556399 RNF7Q9UBF6 113 aa12.73□□□□□ -0.37
ARHGEF40-207ENST00000556399 UQCR10Q9UDW1 63 aa12.73□□□□□ -0.37
ARHGEF40-207ENST00000556399 TCF19Q9Y242 345 aa12.73□□□□□ -0.37
ARHGEF40-207ENST00000556399 SVILO95425 2214 aa12.73□□□□□ -0.37
ARHGEF40-207ENST00000556399 CELA3AP09093 270 aa12.72□□□□□ -0.37
ARHGEF40-207ENST00000556399 GCHFRP30047 84 aa12.72□□□□□ -0.37
ARHGEF40-207ENST00000556399 PTGDSP41222 190 aa12.72□□□□□ -0.37
ARHGEF40-207ENST00000556399 KLF14Q8TD94 323 aaPredicted RBP12.72□□□□□ -0.37
ARHGEF40-207ENST00000556399 ANAPC10Q9UM13 185 aa12.72□□□□□ -0.37
ARHGEF40-207ENST00000556399 E9PLN8 166 aa12.72□□□□□ -0.37
ARHGEF40-207ENST00000556399 J3QR89 54 aa12.72□□□□□ -0.37
ARHGEF40-207ENST00000556399 CD55P08174 381 aa12.72□□□□□ -0.37
ARHGEF40-207ENST00000556399 SRIP30626 198 aa12.72□□□□□ -0.37
ARHGEF40-207ENST00000556399 HINT1P49773 126 aaPredicted RBP12.72□□□□□ -0.37
ARHGEF40-207ENST00000556399 NOTCH4Q99466 2003 aa12.72□□□□□ -0.37
ARHGEF40-207ENST00000556399 WNT9BO14905 357 aa12.72□□□□□ -0.37
ARHGEF40-207ENST00000556399 LYZP61626 148 aa12.72□□□□□ -0.37
ARHGEF40-207ENST00000556399 RPL31P62899 125 aaKnown RBP12.72□□□□□ -0.37
ARHGEF40-207ENST00000556399 NMSQ5H8A3 153 aa12.72□□□□□ -0.37
ARHGEF40-207ENST00000556399 C17orf82Q86X59 251 aaPredicted RBP12.72□□□□□ -0.37
ARHGEF40-207ENST00000556399 OR4F17Q8NGA8 305 aa12.72□□□□□ -0.37
ARHGEF40-207ENST00000556399 PAXXQ9BUH6 204 aa12.72□□□□□ -0.37
ARHGEF40-207ENST00000556399 C1QTNF9BB2RNN3 333 aa12.72□□□□□ -0.37
ARHGEF40-207ENST00000556399 UMODP07911 640 aa12.72□□□□□ -0.37
ARHGEF40-207ENST00000556399 OR5AL1P0C617 328 aa12.72□□□□□ -0.37
ARHGEF40-207ENST00000556399 LGALS4P56470 323 aa12.72□□□□□ -0.37
ARHGEF40-207ENST00000556399 ABLIM2Q6H8Q1 611 aa12.72□□□□□ -0.37
ARHGEF40-207ENST00000556399 C5orf24Q7Z6I8 188 aa12.72□□□□□ -0.37
ARHGEF40-207ENST00000556399 OR1L8Q8NGR8 309 aa12.72□□□□□ -0.37
ARHGEF40-207ENST00000556399 PLPPR1Q8TBJ4 325 aa12.72□□□□□ -0.37
ARHGEF40-207ENST00000556399 TRAV1-1A0A0B4J248 108 aa12.71□□□□□ -0.37
ARHGEF40-207ENST00000556399 SLC17A3O00476 420 aa12.71□□□□□ -0.37
ARHGEF40-207ENST00000556399 CEACAM1P13688 526 aa12.71□□□□□ -0.37
ARHGEF40-207ENST00000556399 LURAP1LQ8IV03 231 aa12.71□□□□□ -0.37
ARHGEF40-207ENST00000556399 CCL17Q92583 94 aa12.71□□□□□ -0.37
ARHGEF40-207ENST00000556399 COL8A1P27658 744 aa12.71□□□□□ -0.37
ARHGEF40-207ENST00000556399 HES3Q5TGS1 186 aa12.71□□□□□ -0.37
ARHGEF40-207ENST00000556399 ZNF324BQ6AW86 544 aaPredicted RBP12.71□□□□□ -0.37
ARHGEF40-207ENST00000556399 SLC35E4Q6ICL7 350 aa12.71□□□□□ -0.37
ARHGEF40-207ENST00000556399 STPG3Q8N7X2 389 aa12.71□□□□□ -0.37
ARHGEF40-207ENST00000556399 ZCCHC14Q8WYQ9 949 aaKnown RBP12.71□□□□□ -0.37
ARHGEF40-207ENST00000556399 TIMD4Q96H15 378 aa12.71□□□□□ -0.37
ARHGEF40-207ENST00000556399 ZNF716A6NP11 495 aa12.71□□□□□ -0.38
ARHGEF40-207ENST00000556399 NEURL1O76050 574 aa12.71□□□□□ -0.38
ARHGEF40-207ENST00000556399 HSPE1P61604 102 aaKnown RBP12.71□□□□□ -0.38
ARHGEF40-207ENST00000556399 FAM214BQ7L5A3 538 aa12.71□□□□□ -0.38
ARHGEF40-207ENST00000556399 FLYWCH2Q96CP2 140 aaKnown RBP12.71□□□□□ -0.38
ARHGEF40-207ENST00000556399 MAP1LC3CQ9BXW4 147 aa12.71□□□□□ -0.38
ARHGEF40-207ENST00000556399 TRAV24A0A0B4J272 114 aa12.71□□□□□ -0.38
ARHGEF40-207ENST00000556399 AMBPP02760 352 aa12.71□□□□□ -0.38
ARHGEF40-207ENST00000556399 FCER1GP30273 86 aa12.71□□□□□ -0.38
ARHGEF40-207ENST00000556399 NHLRC2Q8NBF2 726 aa12.71□□□□□ -0.38
ARHGEF40-207ENST00000556399 GATAD1Q8WUU5 269 aa12.71□□□□□ -0.38
ARHGEF40-207ENST00000556399 NDFIP1Q9BT67 221 aa12.71□□□□□ -0.38
ARHGEF40-207ENST00000556399 PILRBQ9UKJ0 227 aa12.71□□□□□ -0.38
ARHGEF40-207ENST00000556399 SCO2A0A1W2PP80 73 aa12.7□□□□□ -0.38
ARHGEF40-207ENST00000556399 AMY1AP04745 511 aa12.7□□□□□ -0.38
ARHGEF40-207ENST00000556399 ZNF137PP52743 207 aa12.7□□□□□ -0.38
ARHGEF40-207ENST00000556399 TNXAQ16473 311 aa12.7□□□□□ -0.38
ARHGEF40-207ENST00000556399 WASHC3Q9Y3C0 194 aa12.7□□□□□ -0.38
ARHGEF40-207ENST00000556399 TEX50A0A1B0GTY4 177 aa12.7□□□□□ -0.38
ARHGEF40-207ENST00000556399 CD82P27701 267 aa12.7□□□□□ -0.38
ARHGEF40-207ENST00000556399 CTAG1AP78358 180 aa12.7□□□□□ -0.38
ARHGEF40-207ENST00000556399 OR51G1Q8NGK1 321 aa12.7□□□□□ -0.38
ARHGEF40-207ENST00000556399 AAMDCQ9H7C9 122 aa12.7□□□□□ -0.38
ARHGEF40-207ENST00000556399 NUBP1P53384 320 aa12.7□□□□□ -0.38
ARHGEF40-207ENST00000556399 HGFACQ04756 655 aa12.7□□□□□ -0.38
ARHGEF40-207ENST00000556399 FAM122AQ96E09 287 aa12.7□□□□□ -0.38
ARHGEF40-207ENST00000556399 PERPQ96FX8 193 aa12.7□□□□□ -0.38
ARHGEF40-207ENST00000556399 GNB4Q9HAV0 340 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms