RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 PHLDA1Q8WV24 401 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-239ENST00000556315 CPNE2Q96FN4 548 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-239ENST00000556315 GGTLC1Q9BX51 225 aa3.6□□□□□ -1.83
ATXN3-239ENST00000556315 FBXL15Q9H469 300 aa3.6□□□□□ -1.83
ATXN3-239ENST00000556315 ZNF355PQ9NSJ1 428 aa3.6□□□□□ -1.83
ATXN3-239ENST00000556315 PLCXD1Q9NUJ7 323 aa3.6□□□□□ -1.83
ATXN3-239ENST00000556315 PEF1Q9UBV8 284 aaKnown RBP3.6□□□□□ -1.83
ATXN3-239ENST00000556315 TP53TG1Q9Y2A0 90 aa3.6□□□□□ -1.83
ATXN3-239ENST00000556315 PNMA8CA0A1B0GUJ8 204 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 A0A1B0GVY2 172 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 UBE2CO00762 179 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 GAGE7O76087 117 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 OR7C1O76099 320 aaPredicted RBP3.59□□□□□ -1.83
ATXN3-239ENST00000556315 OR2A4O95047 310 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 FADS2O95864 444 aaKnown RBP3.59□□□□□ -1.83
ATXN3-239ENST00000556315 IFNA4P05014 189 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 GAGE12FP0CL80 117 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 GAGE12GP0CL81 117 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 GAGE12IP0CL82 117 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 MC5RP33032 325 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 ATP6V1E1P36543 226 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 KIR2DS2P43631 304 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 PPP5CP53041 499 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 TCTAP57738 103 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 EWSR1Q01844 656 aaKnown RBP eCLIP3.59□□□□□ -1.83
ATXN3-239ENST00000556315 ZNF45Q02386 682 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 GAGE1Q13065 139 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 GAGE4Q13068 117 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 CBX3Q13185 183 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 PTGES3Q15185 160 aaKnown RBP3.59□□□□□ -1.83
ATXN3-239ENST00000556315 RSU1Q15404 277 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 MED22Q15528 200 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 NEDD8Q15843 81 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 GUCA2BQ16661 112 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 RPEL1Q2QD12 228 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 TRIM16LQ309B1 348 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 PIGYQ3MUY2 71 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 TIMM50Q3ZCQ8 353 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 MORN2Q502X0 79 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 C6orf183Q5T699 404 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 UBE2UQ5VVX9 321 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 GGNBP1Q5YKI7 109 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 KDM4DQ6B0I6 523 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 ZNF343Q6P1L6 599 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 ZNF497Q6ZNH5 498 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 ZNF833PQ6ZTB9 187 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 FAM220AQ7Z4H9 259 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 GID4Q8IVV7 300 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 SERPINA12Q8IW75 414 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 CENPSQ8N2Z9 138 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 STX19Q8N4C7 294 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 TCEANCQ8N8B7 351 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 OR5T1Q8NG75 326 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 OR10V1Q8NGI7 309 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 OR13C3Q8NGS6 347 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 RHOXF1Q8NHV9 184 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 TNFAIP8L1Q8WVP5 186 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 YIPF6Q96EC8 236 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 MRPS24Q96EL2 167 aaKnown RBP3.59□□□□□ -1.83
ATXN3-239ENST00000556315 USMG5Q96IX5 58 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 TBX5Q99593 518 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 RNF5Q99942 180 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 DCUN1D5Q9BTE7 237 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 FAM103A1Q9BTL3 118 aaKnown RBP3.59□□□□□ -1.83
ATXN3-239ENST00000556315 FUNDC2Q9BWH2 189 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 MRPL20Q9BYC9 149 aaKnown RBP3.59□□□□□ -1.83
ATXN3-239ENST00000556315 PRRG3Q9BZD7 231 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 OR2S2Q9NQN1 319 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 TECRQ9NZ01 308 aaKnown RBP3.59□□□□□ -1.83
ATXN3-239ENST00000556315 RCC2Q9P258 522 aaKnown RBP3.59□□□□□ -1.83
ATXN3-239ENST00000556315 WARS2Q9UGM6 360 aaKnown RBP3.59□□□□□ -1.83
ATXN3-239ENST00000556315 ST3GAL6Q9Y274 331 aa3.59□□□□□ -1.83
ATXN3-239ENST00000556315 TNCP24821 2201 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 A0A0B4J203 849 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 MSGN1A6NI15 193 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 MCRIP1C9JLW8 97 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 AIPO00170 330 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 SULT1B1O43704 296 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 YPEL1O60688 119 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 RBBP9O75884 186 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 HBZP02008 142 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 PRKACGP22612 351 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 FXYD3Q14802 87 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 CTF1Q16619 201 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 ANKRD55Q3KP44 614 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 TP53I3Q53FA7 332 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 NHLRC3Q5JS37 347 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 LY6G6FQ5SQ64 297 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 ATAD3CQ5T2N8 411 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 MZT2BQ6NZ67 158 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 TRAT1Q6PIZ9 186 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 LINC00596Q86U02 117 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 ODF3L1Q8IXM7 274 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 BPIFB6Q8NFQ5 453 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 OR10H4Q8NGA5 316 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 OR10K1Q8NGX5 313 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 OR10AC1Q8NH08 325 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 OR52N1Q8NH53 320 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 OR1L1Q8NH94 360 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 DYNC2LI1Q8TCX1 351 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms