RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 IGHV3-48P01763 117 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 CTSLP07711 333 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 IGFBP3P17936 291 aaPredicted RBP2.32□□□□□ -2.04
SRP54-209ENST00000555746 HRH1P35367 487 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 KIR2DS4P43632 304 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 EVX1P49640 407 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 HCCSP53701 268 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 ZNF121P58317 390 aaPredicted RBP2.32□□□□□ -2.04
SRP54-209ENST00000555746 HIST1H3AP68431 136 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 H3F3AP84243 136 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 PSG4Q00888 419 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 PPP1R1AQ13522 171 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 FAM53BQ14153 422 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 GNMTQ14749 295 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 PDGFRLQ15198 375 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 NEDD8Q15843 81 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 C4orf26Q17RF5 130 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 TRMT12Q53H54 448 aaKnown RBP2.32□□□□□ -2.04
SRP54-209ENST00000555746 AKR1C8PQ5T2L2 129 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 C1orf195Q5TG92 126 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 TNFAIP8L2Q6P589 184 aaPredicted RBP2.32□□□□□ -2.04
SRP54-209ENST00000555746 TBPL2Q6SJ96 375 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 HIST2H3AQ71DI3 136 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 HSD17B13Q7Z5P4 300 aaPredicted RBP2.32□□□□□ -2.04
SRP54-209ENST00000555746 CROCCP2Q86T23 111 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 BAP18Q8IXM2 172 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 PDZD9Q8IXQ8 264 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 ZADH2Q8N4Q0 377 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 C12orf45Q8N5I9 185 aaPredicted RBP2.32□□□□□ -2.04
SRP54-209ENST00000555746 ATPAF2Q8N5M1 289 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 ACBD7Q8N6N7 88 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 GATD1Q8NB37 220 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 UBAC2Q8NBM4 344 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 OR4E2Q8NGC2 313 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 OR10G4Q8NGN3 311 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 GNPDA2Q8TDQ7 276 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 CANT1Q8WVQ1 401 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 TCTEX1D2Q8WW35 142 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 RDH5Q92781 318 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 GALMQ96C23 342 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 DNAJC19Q96DA6 116 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 DNAJC30Q96LL9 226 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 OR7D2Q96RA2 312 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 P2RX4Q99571 388 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 RNF126Q9BV68 326 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 HES7Q9BYE0 225 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 MAP1LC3BQ9GZQ8 125 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 DCSTAMPQ9H295 470 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 REEP4Q9H6H4 257 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 ZNF442Q9H7R0 627 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 ZDHHC11Q9H8X9 412 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 SLCO1B3Q9NPD5 702 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 KCNJ16Q9NPI9 418 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 ANAPC11Q9NYG5 84 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 COMMD9Q9P000 198 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 DHCR7Q9UBM7 475 aaKnown RBP2.32□□□□□ -2.04
SRP54-209ENST00000555746 SCP2D1Q9UJQ7 156 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 SCN2AQ99250 2005 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 PIKFYVEQ9Y2I7 2098 aa2.32□□□□□ -2.04
SRP54-209ENST00000555746 BORCS7-ASMTA0A0B4J1R7 106 aa2.31□□□□□ -2.04
SRP54-209ENST00000555746 A0A0X1KG70 313 aa2.31□□□□□ -2.04
SRP54-209ENST00000555746 TRAPPC13A5PLN9 417 aa2.31□□□□□ -2.04
SRP54-209ENST00000555746 NKX2-6A6NCS4 301 aa2.31□□□□□ -2.04
SRP54-209ENST00000555746 KRBOX1C9JBD0 128 aa2.31□□□□□ -2.04
SRP54-209ENST00000555746 I3L4J1 428 aa2.31□□□□□ -2.04
SRP54-209ENST00000555746 I3L521 148 aa2.31□□□□□ -2.04
SRP54-209ENST00000555746 ZNF593O00488 134 aaPredicted RBP2.31□□□□□ -2.04
SRP54-209ENST00000555746 COPEO14579 308 aa2.31□□□□□ -2.04
SRP54-209ENST00000555746 DEGS1O15121 323 aa2.31□□□□□ -2.04
SRP54-209ENST00000555746 SPAG7O75391 227 aa2.31□□□□□ -2.04
SRP54-209ENST00000555746 RDH16O75452 317 aa2.31□□□□□ -2.04
SRP54-209ENST00000555746 CDS2O95674 445 aa2.31□□□□□ -2.04
SRP54-209ENST00000555746 IGLV3-19P01714 112 aa2.31□□□□□ -2.04
SRP54-209ENST00000555746 APOA2P02652 100 aa2.31□□□□□ -2.04
SRP54-209ENST00000555746 DBIP07108 87 aaKnown RBP2.31□□□□□ -2.04
SRP54-209ENST00000555746 CRYGDP07320 174 aa2.31□□□□□ -2.04
SRP54-209ENST00000555746 UBBP0CG47 229 aa2.31□□□□□ -2.04
SRP54-209ENST00000555746 MPC1LP0DKB6 136 aa2.31□□□□□ -2.04
SRP54-209ENST00000555746 CD37P11049 281 aa2.31□□□□□ -2.04
SRP54-209ENST00000555746 ZNF30P17039 623 aa2.31□□□□□ -2.04
SRP54-209ENST00000555746 ELK1P19419 428 aa2.31□□□□□ -2.04
SRP54-209ENST00000555746 ARL2P36404 184 aa2.31□□□□□ -2.04
SRP54-209ENST00000555746 CDKN2BP42772 138 aa2.31□□□□□ -2.04
SRP54-209ENST00000555746 TDGF1P3P51864 188 aa2.31□□□□□ -2.04
SRP54-209ENST00000555746 FBXW4P57775 412 aa2.31□□□□□ -2.04
SRP54-209ENST00000555746 COPZ1P61923 177 aa2.31□□□□□ -2.04
SRP54-209ENST00000555746 FMODQ06828 376 aa2.31□□□□□ -2.04
SRP54-209ENST00000555746 LTC4SQ16873 150 aa2.31□□□□□ -2.04
SRP54-209ENST00000555746 CLEC12BQ2HXU8 276 aa2.31□□□□□ -2.04
SRP54-209ENST00000555746 PARP15Q460N3 678 aa2.31□□□□□ -2.04
SRP54-209ENST00000555746 OCIAD2Q56VL3 154 aa2.31□□□□□ -2.04
SRP54-209ENST00000555746 FAM27D1Q5T7N8 215 aa2.31□□□□□ -2.04
SRP54-209ENST00000555746 TEX36Q5VZQ5 186 aa2.31□□□□□ -2.04
SRP54-209ENST00000555746 TMEM215Q68D42 235 aa2.31□□□□□ -2.04
SRP54-209ENST00000555746 ZFAND6Q6FIF0 208 aa2.31□□□□□ -2.04
SRP54-209ENST00000555746 LAMTOR1Q6IAA8 161 aa2.31□□□□□ -2.04
SRP54-209ENST00000555746 AGTRAPQ6RW13 159 aa2.31□□□□□ -2.04
SRP54-209ENST00000555746 OPN5Q6U736 354 aa2.31□□□□□ -2.04
SRP54-209ENST00000555746 UNQ9370/PRO34162Q6UXP9 181 aa2.31□□□□□ -2.04
SRP54-209ENST00000555746 C12orf54Q6X4T0 127 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms