RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 SRSF12Q8WXF0 261 aaKnown RBP9.12□□□□□ -0.95
VRK1-204ENST00000555351 BORCS5Q969J3 196 aa9.12□□□□□ -0.95
VRK1-204ENST00000555351 KCTD12Q96CX2 325 aaKnown RBP9.12□□□□□ -0.95
VRK1-204ENST00000555351 YIPF6Q96EC8 236 aa9.12□□□□□ -0.95
VRK1-204ENST00000555351 S100A16Q96FQ6 103 aaKnown RBP9.12□□□□□ -0.95
VRK1-204ENST00000555351 SPIN2AQ99865 258 aa9.12□□□□□ -0.95
VRK1-204ENST00000555351 SPIN2BQ9BPZ2 258 aa9.12□□□□□ -0.95
VRK1-204ENST00000555351 ALX4Q9H161 411 aaPredicted RBP9.12□□□□□ -0.95
VRK1-204ENST00000555351 MSGN1A6NI15 193 aa9.11□□□□□ -0.95
VRK1-204ENST00000555351 FAM223BA6NKX1 122 aa9.11□□□□□ -0.95
VRK1-204ENST00000555351 RBFOX2O43251 390 aaKnown RBP eCLIP9.11□□□□□ -0.95
VRK1-204ENST00000555351 FCGR3BO75015 233 aa9.11□□□□□ -0.95
VRK1-204ENST00000555351 ACTL6BO94805 426 aa9.11□□□□□ -0.95
VRK1-204ENST00000555351 FGF2P09038 288 aa9.11□□□□□ -0.95
VRK1-204ENST00000555351 OR9G9P0C7N8 305 aa9.11□□□□□ -0.95
VRK1-204ENST00000555351 SAA1P0DJI8 122 aaPredicted RBP9.11□□□□□ -0.95
VRK1-204ENST00000555351 MAS1LP35410 378 aa9.11□□□□□ -0.95
VRK1-204ENST00000555351 SLURP1P55000 103 aa9.11□□□□□ -0.95
VRK1-204ENST00000555351 RPL30P62888 115 aaKnown RBP9.11□□□□□ -0.95
VRK1-204ENST00000555351 UBE2NLQ5JXB2 153 aa9.11□□□□□ -0.95
VRK1-204ENST00000555351 ZNF343Q6P1L6 599 aa9.11□□□□□ -0.95
VRK1-204ENST00000555351 SLC25A42Q86VD7 318 aa9.11□□□□□ -0.95
VRK1-204ENST00000555351 FAM223AQ8IWN6 122 aa9.11□□□□□ -0.95
VRK1-204ENST00000555351 MFSD4AQ8N468 514 aa9.11□□□□□ -0.95
VRK1-204ENST00000555351 ADAD2Q8NCV1 583 aaKnown RBP9.11□□□□□ -0.95
VRK1-204ENST00000555351 OR5T1Q8NG75 326 aa9.11□□□□□ -0.95
VRK1-204ENST00000555351 OR5AP2Q8NGF4 316 aa9.11□□□□□ -0.95
VRK1-204ENST00000555351 GIMAP1Q8WWP7 306 aa9.11□□□□□ -0.95
VRK1-204ENST00000555351 OR4C12Q96R67 309 aa9.11□□□□□ -0.95
VRK1-204ENST00000555351 DCUN1D5Q9BTE7 237 aa9.11□□□□□ -0.95
VRK1-204ENST00000555351 ELOVL1Q9BW60 279 aa9.11□□□□□ -0.95
VRK1-204ENST00000555351 ZNF430Q9H8G1 570 aaPredicted RBP9.11□□□□□ -0.95
VRK1-204ENST00000555351 ZNF355PQ9NSJ1 428 aa9.11□□□□□ -0.95
VRK1-204ENST00000555351 COL7A1Q02388 2944 aa9.11□□□□□ -0.95
VRK1-204ENST00000555351 SAP30O75446 220 aa9.1□□□□□ -0.95
VRK1-204ENST00000555351 HRASP01112 189 aa9.1□□□□□ -0.95
VRK1-204ENST00000555351 PPYP01298 95 aa9.1□□□□□ -0.95
VRK1-204ENST00000555351 IGHV3-11P01762 117 aa9.1□□□□□ -0.95
VRK1-204ENST00000555351 FCGR2CP31995 323 aa9.1□□□□□ -0.95
VRK1-204ENST00000555351 RPS19P39019 145 aaKnown RBP9.1□□□□□ -0.95
VRK1-204ENST00000555351 TNXAQ16473 311 aa9.1□□□□□ -0.95
VRK1-204ENST00000555351 PUSL1Q8N0Z8 303 aaKnown RBP9.1□□□□□ -0.95
VRK1-204ENST00000555351 TTC9CQ8N5M4 171 aa9.1□□□□□ -0.95
VRK1-204ENST00000555351 TMEM167AQ8TBQ9 72 aa9.1□□□□□ -0.95
VRK1-204ENST00000555351 TCTEX1D2Q8WW35 142 aa9.1□□□□□ -0.95
VRK1-204ENST00000555351 ACOT12Q8WYK0 555 aa9.1□□□□□ -0.95
VRK1-204ENST00000555351 CMTM3Q96MX0 182 aa9.1□□□□□ -0.95
VRK1-204ENST00000555351 PRR25Q96S07 402 aa9.1□□□□□ -0.95
VRK1-204ENST00000555351 PHB2Q99623 299 aa9.1□□□□□ -0.95
VRK1-204ENST00000555351 ANAPC10Q9UM13 185 aa9.1□□□□□ -0.95
VRK1-204ENST00000555351 TRBV9A0A0B4J1U6 114 aa9.09□□□□□ -0.95
VRK1-204ENST00000555351 MPPED1O15442 326 aa9.09□□□□□ -0.95
VRK1-204ENST00000555351 KBTBD11O94819 623 aa9.09□□□□□ -0.95
VRK1-204ENST00000555351 OR2A4O95047 310 aa9.09□□□□□ -0.95
VRK1-204ENST00000555351 CATR1Q13166 79 aa9.09□□□□□ -0.95
VRK1-204ENST00000555351 DYRK1AQ13627 763 aa9.09□□□□□ -0.95
VRK1-204ENST00000555351 KLF5Q13887 457 aaPredicted RBP9.09□□□□□ -0.95
VRK1-204ENST00000555351 POU2AF1Q16633 256 aa9.09□□□□□ -0.95
VRK1-204ENST00000555351 TATDN3Q17R31 274 aa9.09□□□□□ -0.95
VRK1-204ENST00000555351 KLK9Q2XQG4 91 aa9.09□□□□□ -0.95
VRK1-204ENST00000555351 IDO2Q6ZQW0 420 aa9.09□□□□□ -0.95
VRK1-204ENST00000555351 GVQW1Q8N7I0 195 aa9.09□□□□□ -0.95
VRK1-204ENST00000555351 NECAP1Q8NC96 275 aa9.09□□□□□ -0.95
VRK1-204ENST00000555351 OR13F1Q8NGS4 319 aa9.09□□□□□ -0.95
VRK1-204ENST00000555351 OR4A5Q8NH83 315 aa9.09□□□□□ -0.95
VRK1-204ENST00000555351 CD300LFQ8TDQ1 290 aa9.09□□□□□ -0.95
VRK1-204ENST00000555351 SNAPC3Q92966 411 aa9.09□□□□□ -0.95
VRK1-204ENST00000555351 SLC25A46Q96AG3 418 aa9.09□□□□□ -0.95
VRK1-204ENST00000555351 OR2A7Q96R45 310 aa9.09□□□□□ -0.95
VRK1-204ENST00000555351 COA4Q9NYJ1 87 aa9.09□□□□□ -0.95
VRK1-204ENST00000555351 SIGLEC8Q9NYZ4 499 aa9.09□□□□□ -0.95
VRK1-204ENST00000555351 PEF1Q9UBV8 284 aaKnown RBP9.09□□□□□ -0.95
VRK1-204ENST00000555351 KLK9Q9UKQ9 250 aa9.09□□□□□ -0.95
VRK1-204ENST00000555351 ZNF257Q9Y2Q1 563 aa9.09□□□□□ -0.95
VRK1-204ENST00000555351 SMAD5-AS1Q9Y6J3 95 aa9.09□□□□□ -0.95
VRK1-204ENST00000555351 NPIPB5A8MRT5 1133 aa9.08□□□□□ -0.96
VRK1-204ENST00000555351 J3QRK9 145 aa9.08□□□□□ -0.96
VRK1-204ENST00000555351 IGLV1-51P01701 117 aa9.08□□□□□ -0.96
VRK1-204ENST00000555351 NAT1P18440 290 aa9.08□□□□□ -0.96
VRK1-204ENST00000555351 BRWD1-AS2P59051 145 aa9.08□□□□□ -0.96
VRK1-204ENST00000555351 DHRS11Q6UWP2 260 aa9.08□□□□□ -0.96
VRK1-204ENST00000555351 CADM3Q8N126 398 aa9.08□□□□□ -0.96
VRK1-204ENST00000555351 SAMD12Q8N8I0 201 aa9.08□□□□□ -0.96
VRK1-204ENST00000555351 SECTM1Q8WVN6 248 aa9.08□□□□□ -0.96
VRK1-204ENST00000555351 IFT46Q9NQC8 304 aa9.08□□□□□ -0.96
VRK1-204ENST00000555351 TAS2R8Q9NYW2 309 aa9.08□□□□□ -0.96
VRK1-204ENST00000555351 ADAM30Q9UKF2 790 aa9.08□□□□□ -0.96
VRK1-204ENST00000555351 LY86O95711 162 aa9.07□□□□□ -0.96
VRK1-204ENST00000555351 DHFRP00374 187 aa9.07□□□□□ -0.96
VRK1-204ENST00000555351 HPRT1P00492 218 aa9.07□□□□□ -0.96
VRK1-204ENST00000555351 APOA1P02647 267 aa9.07□□□□□ -0.96
VRK1-204ENST00000555351 ZNF735P0CB33 412 aa9.07□□□□□ -0.96
VRK1-204ENST00000555351 GP9P14770 177 aa9.07□□□□□ -0.96
VRK1-204ENST00000555351 RPL27AP46776 148 aaKnown RBP9.07□□□□□ -0.96
VRK1-204ENST00000555351 TAS2R31P59538 309 aa9.07□□□□□ -0.96
VRK1-204ENST00000555351 TAS2R46P59540 309 aa9.07□□□□□ -0.96
VRK1-204ENST00000555351 RHOGP84095 191 aa9.07□□□□□ -0.96
VRK1-204ENST00000555351 TMEM69Q5SWH9 247 aa9.07□□□□□ -0.96
VRK1-204ENST00000555351 OR9G4Q8NGQ1 327 aa9.07□□□□□ -0.96
VRK1-204ENST00000555351 WWC2-AS2Q96NR7 200 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms